Caldimonas thermodepolymerans: IS481_14115
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Entry
IS481_14115 CDS
T06911
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00470
D-Amino acid metabolism
sthm00550
Peptidoglycan biosynthesis
sthm01100
Metabolic pathways
sthm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IS481_14115
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IS481_14115
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IS481_14115
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sthm01011
]
IS481_14115
Enzymes [BR:
sthm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IS481_14115
Peptidoglycan biosynthesis and degradation proteins [BR:
sthm01011
]
Precursor biosynthesis
Amino acid ligase
IS481_14115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
GARS_A
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_4
RimK
ATP-grasp_5
TTL
Motif
Other DBs
NCBI-ProteinID:
QPC30870
LinkDB
All DBs
Position
complement(2997226..2998182)
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AA seq
318 aa
AA seq
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MKLDLASIDPKALGKVAVLMGGHSAEREVSLMSGQGVLDALTSQGVDAHAFDPAERSLDE
LRRDGFDRCFIALHGRFGEDGTVQGALELLHVPYTGSGVMASAIAMDKIMTKRIWRFEGL
PTPDWRLVSSADETRAALAALGAPMIVKPSREGSTIGLTKVTSVEQCDAAFELAARCDPL
VLCEEFIEGDETTCPVLGEGAAAEALPLIRIVAPEGNYDYQNKYFTDVTQYHCPSGLPEA
EEREIQRIVVQAYRTLGCSGWGRADVMIRKKDRKPFLLEMNTSPGMTGHSLVPMSARAAG
ISYEQLCLWLVAQASLKL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggatctcgcctccatcgacccgaaggcgctcggcaaggtggccgtgctgatg
ggcgggcattcggccgagcgcgaggtgtcgctgatgtccggccagggcgtgctggacgcg
ctgacctcgcagggcgtggacgcacatgccttcgacccggccgagcgcagcctggacgag
ctgcgccgcgacggcttcgaccgctgcttcatcgcgctgcacggccgtttcggcgaggac
ggcacggtgcagggcgccctcgagctgctgcacgtgccgtacaccggctcgggcgtgatg
gcctcggccatcgcgatggacaagatcatgaccaagcgcatctggcgcttcgagggcctg
cccacgcccgactggcggctggtgtccagcgccgacgagacgcgcgcggcgctggccgcg
ctcggcgcgccgatgatcgtcaagccctcgcgagaaggctcgaccatcgggctgaccaag
gtcaccagcgtcgagcagtgcgacgcggccttcgagctggccgcgcgctgcgacccgctg
gtgctgtgcgaggagttcatcgagggcgacgagaccacctgcccggtgctgggcgagggg
gcggcggccgaggcgctgccgctgatccgcatcgtcgcgccggaaggcaactacgactac
cagaacaagtacttcaccgacgtcacgcagtaccactgcccgagcggcctgcccgaagcc
gaggagcgagagatccagcgcatcgtcgtgcaggcctaccgcacgctcggctgcagcggc
tggggacgtgccgacgtgatgatccgcaagaaggaccgcaagcccttcctgctcgagatg
aacacctcgccgggcatgaccggccattcgctggtgccgatgtcggcgcgcgcggcgggg
atcagctacgaacagctgtgcctgtggctggtggcccaggcctcgctgaagctctga
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