Streptococcus salivarius JIM8777: SALIVA_1520
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Entry
SALIVA_1520 CDS
T02089
Symbol
yjbO
Name
(GenBank) uncharacterized RNA pseudouridine synthase yjbO (RNA-uridine isomerase) (RNA pseudouridylate synthase)
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
stj
Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stj03009
]
SALIVA_1520 (yjbO)
Enzymes [BR:
stj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SALIVA_1520 (yjbO)
Ribosome biogenesis [BR:
stj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SALIVA_1520 (yjbO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CCB95828
LinkDB
All DBs
Position
complement(1671842..1672738)
Genome browser
AA seq
298 aa
AA seq
DB search
MRYEFTVGRSCRVKTFLKEHDVSKGLLAKIKFEGGHIWVNGEEQFATYPVHEGDVVAIEI
PDEAPHETLKPIPFDLDIVYEDDNFLVINKPYGYASIPSVNHDNTMANFVKYHFVSNNYP
NQRVHIVTRLDKDTSGLMLFAKHGYAHARMDKQLQQKSIKKHYYALVEGDTKLEEQGEII
APIARDVDSIITRRVHKSGKYAHTSYRLVADYGRVKLVDINLHTGRTHQIRVHFAHLGLP
LLGDDLYGGSLDYGIKRQALHCHRLAFIDPFTKKEMVHASSLTDDFETVIMNLQTKKD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagatatgagtttacagtagggcgttcttgtcgggttaagacctttttgaaggagcac
gatgtttcaaaaggacttctggccaagattaagtttgagggtggtcatatctgggtcaat
ggtgaggagcagtttgcgacttatcctgttcatgagggagacgtggttgccatagaaatc
cctgatgaggcaccacatgaaaccttgaagccaattccttttgacttggatatagtttat
gaggatgataacttcttggtgattaataaaccctatggctatgctagtattccaagtgtt
aaccatgataatactatggctaattttgtcaaatatcactttgtcagcaataattatcct
aaccagcgggtgcatatcgtgacacgtcttgataaggacacgtctggtcttatgctcttt
gctaagcatggatatgcccacgcgcgaatggataaacagttgcagcagaagtctattaag
aagcattactatgccttggttgaaggtgataccaaacttgaggagcagggcgaaatcatt
gcaccgattgcgcgtgatgtggattccattattacacgtcgggttcataaatcagggaaa
tatgcccatacgagctatcgcttggtagctgattatggtcgagtgaagttggtggatatc
aatcttcatactggacgtacgcaccagattcgtgtgcactttgcccacttaggtttgcct
cttttgggagacgacctttatggcgggtccctagactacggtattaagcgacaagccttg
cattgtcatcgacttgcctttatagatccgttcaccaaaaaagagatggtccatgcatct
tccttgacagatgattttgaaaccgttatcatgaacttacaaactaaaaaagattga
DBGET
integrated database retrieval system
