Sulfurisphaera tokodaii: STK_23310
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Entry
STK_23310 CDS
T00062
Symbol
cas4
Name
(GenBank) putative CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
sto
Sulfurisphaera tokodaii
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sto02048
]
STK_23310 (cas4)
Enzymes [BR:
sto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
STK_23310 (cas4)
Prokaryotic defense system [BR:
sto02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
STK_23310 (cas4)
Subtype I-B factors
STK_23310 (cas4)
Subtype I-C factors
STK_23310 (cas4)
Subtype I-D factors
STK_23310 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
STK_23310 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
PDDEXK_3
AHJR-like
YqaJ
Motif
Other DBs
NCBI-ProteinID:
BAK54785
UniProt:
F9VPD8
LinkDB
All DBs
Position
complement(2334285..2334896)
Genome browser
AA seq
203 aa
AA seq
DB search
MLVERIFKKKLEDYLTHIKDDNTLYVTDLIRCPLKIQYEKTYKELAISEVFTPSTILGDM
VHEGLENFIKNNFSNSQVEVEIEREIPVNNKQVKIKGRIDAIAEIDGEKVVIEIKSARAD
KGLPHEHHKVQLQIYLWMTGIKKGLLVYITPDRVTEYEVNEPADEVGVIRLAEETLKRTK
VPRYPWECGYCVYSSVCPYKRNK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgctagtggaaagaattttcaaaaagaaattggaagattatttaacacacataaaagat
gataatacactttacgtcacagacttaatacgatgccccttgaaaattcaatatgaaaaa
acgtataaagaattagcaatttcagaggtcttcacaccctctacaattttaggcgatatg
gtacatgagggattagagaacttcattaaaaataactttagtaattctcaagttgaggtt
gagatagaaagagaaattccagtaaacaataagcaagtgaaaataaaaggaagaattgac
gcaatagcagaaattgacggagaaaaggtagtaattgaaataaaaagtgctagagctgat
aagggattaccacacgagcatcataaagttcaattacaaatttacctttggatgactgga
ataaagaagggtttactagtgtatataactccagacagagtaactgaatatgaagtaaat
gaaccagcagacgaggtaggagtaattagactagctgaagagacgctaaagagaactaaa
gtacctagatatccttgggagtgtggttattgcgtctattcctctgtatgcccctacaag
agaaataaataa
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