Sphaerospermopsis torques-reginae: K2F26_18620
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Entry
K2F26_18620 CDS
T09782
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stoq
Sphaerospermopsis torques-reginae
Pathway
stoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K2F26_18620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoq03019
]
K2F26_18620
03016 Transfer RNA biogenesis [BR:
stoq03016
]
K2F26_18620
Enzymes [BR:
stoq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K2F26_18620
Messenger RNA biogenesis [BR:
stoq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K2F26_18620
Transfer RNA biogenesis [BR:
stoq03016
]
Prokaryotic type
tRNA degradation factors
K2F26_18620
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KhpA-B_KH
ANIS5_cation-bd
SLS1_KH2
aRib
DUF1542
Motif
Other DBs
NCBI-ProteinID:
QYX30857
LinkDB
All DBs
Position
3987791..3989947
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AA seq
718 aa
AA seq
DB search
MAEFEKSISFDGRDIRLKVGLLAPQAGGSVLIESGDTAVLVTATRSEAREGVDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKAILTSRLIDRPLRPLFPSWLRDDLQIIAFTLSMDE
QVPPDVLAVTGASIATLIAQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLVVAGS
PDGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIQAQLDLVEELGLKLIQEEPPEVDQTL
ENYIRDRASAEIKKILAQFELTKNERDTALDAVKDEIKAEIEALPEEDPIRVAATADSKA
LGNTFKDITKYFMRRQIVEDNVRVDGRKLDEVRPISCQVGVLPRRVHGSGIFNRGLTQVL
SACTLGTPGDAQNLNDDLQIDQSKRYLHHYNFPPFSVGETKPMRAPGRREIGHGALAERA
ILPVLPPKEQFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIIKPVTGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLEVIKQAVEQAKAAR
LHILEKMLQTIDQPRTETSPFAPRLLTIKIDPEMIGLVIGPGGKTIKGITEETGAKIDIE
DNGTVTISAVDEGRAKRAKSIIQGMTRKLNEGDVYIGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAAAAREAAAMNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgagaagtcaatatcctttgatggacgggatattcgactgaaggtagga
ctgttagccccccaagcgggtgggtcggtgttgatagaatcgggggatactgctgttttg
gtgacagctacaaggtcagaggccagagagggcgttgattttcttcccctgacggtagat
tatgaagaacgactgtatgcagcaggaagaatccctggtgggattatgcgtcgtgaaggt
cgtccacctgaaaaagcgattttaactagccgtctgattgaccgtcctttgcgtcctctg
tttccttcatggttacgggatgatttgcaaattattgctttcaccctatcaatggatgaa
caagtaccgcctgatgtgttagctgtaactggcgcttctatcgctactctcattgcccaa
attccgtttaatggaccaatggcagcagtgcgggtaggtttagtgggtgatgattttatt
attaaccccacctatgcggagattgaagcgggagatttggatttagttgttgctggttca
cctgatggtgtcatcatggtggaagcaggagcaaatcagttaccagagcgagatatcatc
gaggccattgattttggttacgaagcagtgcgggatttaatccaagcacagctagattta
gttgaagaactgggtttaaaactcatccaagaagagccaccggaagtagaccaaacatta
gaaaactacatccgcgatcgcgccagtgcagaaattaaaaaaatattggcacaatttgag
ttaaccaaaaacgagcgtgatacagctttagatgcagttaaagatgagatcaaggctgaa
atagaagccctacccgaagaagatccgattcgcgtagctgctacagccgatagtaaagca
cttggtaatacctttaaagatatcaccaaatactttatgcgccgtcaaatcgttgaggat
aacgtgcgcgttgatggtcgcaaactagatgaagtccgtcctatatcttgccaagtcgga
gttttaccccgtcgtgtacatggcagtggaatatttaatcggggactaacccaagtatta
tctgcttgtacccttggtacaccaggcgatgctcaaaatctcaatgatgatctacaaata
gatcaatctaaacgttacctgcatcattacaatttccctcctttctccgttggcgaaacc
aaaccaatgcgtgcgccgggaagaagagaaattggtcatggtgctttagccgaaagagcg
attttacccgtactaccgccaaaagaacaattcccctacgtgattcgcgtagtttcagaa
gtgctttcttccaacggttctacctcaatgggttcagtttgcggttctaccctcgccctc
atggatgcgggtgtacccattatcaaacctgtcaccggtgcagcaatgggcttgattaag
gaaggcgacgaagtgcgcgttctcactgatattcaaggcattgaagactttttgggagac
atggacttcaaagttgcgggtactgatacaggtatcaccgccttacaaatggatatgaaa
atatccggtttgtctctagaagttattaaacaagctgtagaacaagcaaaagcagcccgc
ttgcacattctggagaaaatgctccagaccatagatcaaccacgcaccgaaacctcaccc
tttgccccacgtctgttgacaatcaagattgatccagaaatgattggtctggtcattgga
cccggtggtaaaaccatcaaaggaattactgaagagacaggtgcaaaaatcgacattgag
gataatggtacagtcaccatttccgcagtcgatgaaggcagagcaaagagagcaaagagc
atcattcaaggcatgactcgtaaactcaatgaaggggatgtttacataggtcgtgtaaca
cggattatacctattggtgcatttgtggaatttttgcccggaaaagaaggcatgattcac
atttctcaacttgctgactatcgtgttggtaaagtggaagatgaagtagccgttggtgat
gaagtgattgtcaaagtgcgcgaaattgacaataaaggtagaattaacctgacacgcttg
ggtatacacccagatcaagctgctgctgcgcgggaagctgccgccatgaatcgttaa
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