Sphaerodactylus townsendi (Townsend's least gecko): 125425025
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Entry
125425025 CDS
T08213
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125425025 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125425025 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
DivIC
Motif
Other DBs
NCBI-GeneID:
125425025
NCBI-ProteinID:
XP_048338441
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MRGRVACTVAVCDSPALPFASSRGRVRFPSQGCKSKRRERRGQARSPPPLPARGQSPRWP
REERQAERRRRMTARLRLGLLWLVPLLLLAGPCGGAMDECGDQPGRQPQRCMPEFVNAAF
NATVVATDTCGSPAEEYCVQTGVTGVTKSCHLCDASQPLLAHGAAFLTDYNNQADTTWWQ
SQTMLAGVQYPSTINLTLHLGKAFDITYVRLKFHTSRPESFVIYKRTREDGPWVPYQYYS
GSCENTYHKLNRGFIRTGDDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPV
LQEWVTATDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNE
YGKLACTCKHNTFGVDCEKCLPFYNDRPWRRATAESASECLPCNCNGRSQECYFDPELYR
STGHGGHCSGCFGNTDGPNCERCRENFYRVGSEENCLPCNCNPVGSLSTQCDNYGRCSCK
PGVMGDKCDRCQPGFHSLTEAGCRPCSCDPAGSTGECNVETGRCACKDNVEGFNCERCKP
GFFNLDQVNPRGCTPCFCFGHSSVCTNAIGYSIYRITSSFQSGEEDWHAEQRDGSEVSVQ
WIAETQEISVVSETPFPIYFIAPGKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDIVLEG
AGLRVSIPLIAQGNSYPSENSLKYSFRLHEATDYPWRPSLMPFEFQKLLHNLTAIKIRGT
YSERNAAYLDDVTITSARRGPGITAPWVESCTCPTGYLGQFCEECALGYRRETPSLGPYS
PCVPCFCNGHSDICDRESGACDCRDNTAGPHCEKCSDGYYGDATVGTSSDCQPCPCPGGS
SCAIVPKTKEVVCTNCPVGTTGKRCELCDDGYFGDPLGENGPVRLCRLCLCSDNIDPNAV
GNCNRLTGECLKCIYNTAGIYCDRCKDGFFGNPLAPNPEDKCKACNCNPYGTVNVQTSCN
QVTGQCECLPHVIERACSSCEPGFYNLQSGRGCERCDCHPLGSTDGHCDIQTGQCECQPG
ITGQRCERCEANHFGFGPEGCKPCDCDPEGSYSLQCKEDGRCECKQGFVGTRCDQCEENY
FYNRSWPGCQECPACYRLVKDKVAEQRERLQELENLIANLGTGDDAITDQAFEDRLKEAE
RDVMDLLKNAQNSKDVDQGLMDRLHEINRTLSGQLGRLRNIQKTVADTENLAGQARNRVD
DTAQLIKTASDKLARASEAVSKVTLPSPDLISDPNNMTVLVEEARQLAQRHKQEADDIVR
IAKEANDTSTQAYKLLLDTLAGENQTVNDISDLNRKYNQAKDISRDLEKQATKVHAEAEE
AGNKALQIYANLTSLPVVDVEGLEKEAKKIKEEANELDQLINRKLKNYEDLIEDMKGKEL
EVKNLLEKGKTEQQTADQLLARADAAKALAEEAARKGNNTFQEAKDILGNLKDFDKRVND
NKTAAEDALKKIPAITRTITEANNKTLQAELALGNAAADAREAKNRADNAEKIANSVQKN
AATAKADADKTFATVTELDKEMDDMLQQLHDAEEELKKKQDSADQDMMMATMASQAAQEA
EDNARKAKNSVNSLLNMINDLLGKLGDLETVDLSKLEEIERTLNTAQNQMRDNDLDRKVS
DLEKAAEKQASAIDEYNRDIDAILKDIANLEDIKNTLPTGCFNTPSIEKP
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggcgcgttgcatgcacagtcgccgtatgtgactctcccgctcttccttttgct
tccagccggggccgcgtccgctttccctcgcaaggttgcaaaagcaagaggcgggagcgg
cgggggcaggctcgatccccgccaccccttcccgcgagaggccagtctccgaggtggcct
agggaggaaaggcaagcggagcgcaggaggaggatgaccgcccggctgcgcctcgggctg
ctctggctggtgccgctgctgctgctggccgggccgtgcggcggcgccatggacgagtgc
ggggaccagccgggccggcagccgcagcgctgcatgcccgagttcgtcaacgccgccttc
aacgccaccgtggtggccaccgacacgtgcggcagcccggccgaggagtactgcgtgcag
acgggcgtcaccggggtcaccaagtcgtgccacctgtgcgacgcctcccagccgctcctg
gcgcatggcgccgccttcctcaccgactacaacaaccaggccgacaccacctggtggcag
agccagaccatgctggcaggggtccagtaccccagcaccatcaacctcaccttgcacctg
ggaaaggcgtttgatattacatatgtgcgtctgaaattccacaccagccggccggagagt
tttgtcatctacaagcgtactcgggaagatggtccatgggtgccttaccagtattacagt
ggatcgtgtgagaacacttaccacaagctcaatcgaggcttcatcaggactggggacgat
gaacagcaagcactttgcacggatgagttcagcgacatctctccgctcactggaggcaat
gtggccttttcaactttggaggggaggcccagcgcttacaactttgacaacagtccagtt
ttacaggaatgggtaactgctactgatatcagagtaagcctcaatcgtcttaacaccttt
ggagatgaagtatttaatgatcccaaagttctcaagtcatattattatgccatttccgac
ttcgctgtgggtggcaggtgcaagtgtaacggccacgcgagcgagtgtgtgaagaacgaa
tatggaaaactcgcttgcacttgtaaacacaatacctttggggttgactgtgagaagtgc
ctccctttttacaatgaccggccttggcgaagagcaactgcagagagtgccagcgaatgt
ttgccttgcaactgcaatggacggtcccaggagtgttactttgatcctgagctgtatcgt
tccacaggccatggtggccactgctcaggttgctttggtaacactgacgggcccaactgt
gagaggtgtcgggaaaacttctaccgtgtcggtagtgaggaaaactgtctgccgtgtaac
tgcaaccctgttgggtctctcagcacgcagtgcgacaactacgggaggtgcagttgtaaa
cctggggtgatgggtgacaaatgtgatcggtgtcagccgggattccattctctcacagaa
gctggttgcaggccatgttcttgtgaccctgctggaagtacaggtgaatgcaacgtggaa
acgggacgctgtgcctgcaaggacaacgtagaagggttcaactgtgagaggtgtaagcct
ggcttttttaatctggatcaagtcaatcccaggggatgtactccctgcttctgctttgga
cactcatcagtctgtactaatgccattggctacagcatctacagaattacctccagtttc
cagagcggagaggaagattggcacgctgaacaacgagatggctctgaagtctcagttcag
tggattgctgaaactcaagaaatctctgtggtctcggaaacacctttccccatctatttc
atcgcaccaggcaagttccttgggaatcaagtcttgagttatggccaaaacttgacattc
tcctttcgggttgataggcgagacacacgcctttctgctgaggatatagttcttgaaggt
gctggattgagagtgtctatacctctcattgctcaaggcaactcctaccctagtgagaac
tcgctgaagtattccttcagactccatgaagcaaccgactatccctggaggccttctcta
atgccatttgagttccagaaactgcttcataacttaacagctatcaagattcgtgggacc
tacagtgaaagaaatgctgcatatctggatgatgtcaccattacgagtgctagacgtgga
cctggaatcacagctccatgggtggaaagttgtacatgtcccacaggttacctgggccag
ttctgtgaagaatgtgccctgggctacaggagagaaacccctagccttggtccttatagt
ccatgtgtgccatgtttctgcaacggacacagtgatatctgtgaccgtgaatccggagcg
tgcgactgcagagacaacacagcaggtcctcactgtgagaagtgcagtgatggctactat
ggagatgcgacagtgggcacttcttcagattgtcaaccgtgtccctgtccggggggctcg
agctgcgccatagtgcccaaaaccaaggaggtggtttgtactaactgcccagttggtacc
acaggtaaaagatgtgagctgtgtgacgatggctattttggggatcctcttggtgagaac
ggcccagtccggctttgccgcctctgtctatgcagtgataacattgatcccaatgctgtt
ggtaactgcaaccgcttgacaggagaatgtctgaaatgcatctataatacggctggcatc
tattgtgaccggtgcaaagatggattctttgggaatcccttagccccaaatccagaggac
aagtgcaaagcttgcaactgcaatccttacggcacagtgaacgtgcagacgagctgtaat
caagtaacaggtcaatgtgagtgcctgccccatgtcattgagagggcctgcagttcctgt
gagcctgggttctacaatttgcaaagtggacgtggctgtgagaggtgtgactgccatcca
ctgggttccactgacggacactgtgacatacagaccgggcaatgtgaatgccagccgggg
atcactggccagcgttgcgagaggtgtgaggccaaccattttggatttggtcctgaaggc
tgcaaaccgtgtgactgcgacccagaaggttcttattctcttcagtgtaaagaggatggt
cgctgtgagtgtaaacaagggtttgtggggactcgctgtgaccagtgtgaagagaactac
ttctacaaccggtcctggccaggctgccaagagtgccctgcctgctacagattggtgaaa
gacaaggtggcagaacagcgagagagattgcaggagctagaaaaccttatagccaaccta
ggaacaggtgatgatgccataacagatcaggcctttgaagacaggttgaaggaagcagag
agagatgtcatggacttgcttaagaatgcccaaaacagcaaagatgtagatcagggcttg
atggatcgtctccatgagatcaacagaaccctgtctggtcaacttggccggttaagaaac
atccagaagacagtagcagatacagaaaaccttgctggacaagcccgcaaccgggtggac
gacacagctcaactgatcaaaactgcttcagataagctggcgagagcatcggaagcagtt
tccaaagtgactcttccgtcaccagacttgatcagcgatcccaataatatgaccgtcctt
gtagaagaggcccgtcagctagctcagcggcataagcaagaggctgacgacatcgtgcgc
atagccaaagaagcaaatgatacatcaacgcaggcgtataaattgctcttggatacactg
gcaggagagaatcaaacagtaaatgacatcagtgaccttaatagaaagtataatcaagca
aaagacatctcccgagatctggaaaagcaagcgaccaaagtccatgctgaagcagaggaa
gccgggaacaaggctcttcagatctatgctaatctcaccagcctaccagttgtggatgta
gaaggactggagaaagaggcaaagaagatcaaggaggaagccaacgaactggatcagcta
attaataggaagctgaagaattacgaggatcttattgaagacatgaaggggaaagaactg
gaagtgaaaaatcttttggagaaagggaagactgaacagcagacggccgatcagctgctg
gctcgagcggatgctgccaaagctctggccgaagaagcggccaggaaggggaacaacaca
ttccaggaggccaaagacattcttggcaatctaaaagactttgacaagcgtgtcaatgat
aacaaaacagccgctgaggatgccttgaaaaagattcctgctattacccggaccatcaca
gaggccaataataaaacactgcaagctgagctggcactgggcaacgcagctgcggatgcc
agggaagcaaagaacagagctgataatgctgagaaaattgctaattccgtacagaagaac
gctgcaacagcgaaggccgatgccgacaagacctttgcgactgtcactgagctggacaaa
gaaatggatgatatgttgcagcaactgcacgacgcagaggaagagctgaagaagaaacaa
gacagtgcagaccaagatatgatgatggcaacaatggcttcacaagctgctcaggaagca
gaagacaacgcaaggaaagcaaagaactctgtgaacagcttgctcaatatgattaacgac
ctacttgggaaattaggggatctagagacggtggacttgagcaaactagaggaaattgaa
cgtaccttaaataccgcccagaaccagatgagggacaacgatctggatagaaaagtgtct
gatctagaaaaggcagcagagaagcaggccagtgccattgatgaatacaacagggacatt
gacgccatcttgaaagacattgctaatctagaggacatcaagaacaccttgccaaccggc
tgctttaacaccccatccattgagaaaccctaa
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integrated database retrieval system
