Sphaerodactylus townsendi (Townsend's least gecko): 125425945
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Entry
125425945 CDS
T08213
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04145
Phagosome
stow04148
Efferocytosis
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
stow04810
Regulation of actin cytoskeleton
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125425945 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125425945 (ITGB5)
04148 Efferocytosis
125425945 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125425945 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125425945 (ITGB5)
04810 Regulation of actin cytoskeleton
125425945 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125425945 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125425945 (ITGB5)
Membrane trafficking [BR:
stow04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125425945 (ITGB5)
Cell adhesion molecules [BR:
stow04515
]
Integrins
Integrin beta subunits
125425945 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
125425945
NCBI-ProteinID:
XP_048339729
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All DBs
Position
LG02:56502719..56596663
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AA seq
804 aa
AA seq
DB search
MSPGRGPLPYPAAAACICLLSSFFHGVRGLNVCTRGSATSCEECLLIHPKCAWCFKEEFG
SKKSITSRCDFTENLIASGCAGHYESTKSSLNIVKNLPLSRKGSIVTHSDVTQIIPQKIS
LNLRPGDPASFHVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNF
RLGFGSFVDKNISPFSYTAPRYQNNPCTGYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQ
KQRVSRNRDAPEGGFDAILQAAVCEKEIGWRKEASHLLVFTTDDVPHIALDGKLGGLVQP
HDGHCHLNEASEYTASNQLDYPSLALLGEKLAENNIHLIFAVTKSHYVLYKNLTALIPGT
TVEILYQDSRNIIQLIVKAYNSIRSKVELTVWDSPEDLNLAFTATCQDGLSYPGVRKCGD
LQIGDTVSFEISVEARSCPAESTSHTFTIKPDWFRDTLEVTVTYNCTCGCTKHIEPSSSK
CMGNGTYMCGLCDCDPGHVGAKCECEEGETGNLYQNMCREAEGKRVCSGRGECSCNHCVC
YESEFGKIYGPFCECDDFSCARYKGVLCSGHGECHCGECQCHGGYIGDNCNCSIETDDCF
SNDGQMCSGRGNCICGKCQCTEPGAFGDTCEKCPTCPGVCSIKRDCIECMLFNSGRLADN
QTCQKHCRDEIITRVDVLKTDDPQSVLCAYPVKDCVMKFTYSELPSGKTNITVLQEPECG
TTPDAMRILLAVVGSTVLLGIILLAIWKLLVTIHDRREFARFQSERSRARYEMASNPLYR
KPISTHSLDATFNKLNRTYNGTVD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccccggggagggggccgctgccttatcccgccgctgccgcctgcatctgcctcctc
tcctccttcttccacggcgttagaggtctcaatgtttgtacacgtggcagtgctacctcc
tgtgaagaatgcttgctgattcatcccaagtgtgcttggtgctttaaagaggaatttggc
agcaaaaaatctatcacttcaaggtgtgacttcactgaaaacctgattgccagtggttgt
gcagggcactatgagagcacaaaaagcagcctgaatatagtgaagaatcttcctttgagc
agaaaaggctccattgtgactcactcagatgttacccagataatacctcaaaagatctct
ctcaatctacggcctggtgacccagcctctttccatgtgcaggttcggcaggtagaggac
taccccgtggatctatattatttgatggatctttccctttccatgaaggatgatctggac
accattcggaacctgggaactaagctggctgaagagatgggaaagctcaccagcaatttc
cgccttgggtttgggtctttcgtagataagaacatttctccattttcatacacagcaccc
agatatcagaacaatccttgtactggttacaagttgtttccgagttgtgttccatccttt
ggattccggcaccttttatctctcacggataaagtagaccgtttcaatgaagaagttcag
aaacagagggtttcccgcaatagagatgctccagaaggtggttttgatgcaatacttcag
gctgctgtgtgtgagaaggagattgggtggcggaaggaggcttctcacttgctcgtcttc
actacagatgatgtcccacatatagctctggatgggaagctgggtggattggtgcagcca
catgatgggcactgtcacttgaatgaggccagtgaatataccgcatccaatcagctggac
tacccttcccttgcacttcttggagagaaactagctgaaaacaatatccacctaattttt
gctgtaacaaaaagtcattatgttctttacaagaaccttacagctttaattcctggaaca
acagtggagattttataccaagactccaggaatattatccagctcatagtcaaggcctat
aatagcattcgttctaaagtagaactaactgtctgggacagtcctgaggatcttaacctt
gcttttacagccacttgtcaggatggcttatcgtaccctggtgtcaggaagtgtggtgat
cttcaaataggagacacggtttcctttgaaatatcagtagaagctcggagctgccctgcc
gagagtacctcgcataccttcacgatcaagccagactggtttcgggacacactcgaagtg
actgtcacctacaattgcacatgtggatgtacaaagcatattgagccaagcagcagcaag
tgcatggggaatggcacttacatgtgtggattatgtgactgtgacccaggccacgtgggt
gccaagtgtgaatgtgaggaaggagagactgggaacctgtaccagaatatgtgtcgtgag
gctgaagggaaacgtgtctgcagtggccgaggggaatgttcttgcaaccactgtgtctgc
tacgagagtgagtttgggaagatctacgggccattctgtgaatgtgatgacttctcatgt
gcaagatataaaggtgttctctgctcaggtcatggagaatgtcactgcggagagtgccag
tgtcatggaggctatatcggagacaactgcaactgctcaatagagacggatgattgcttc
tccaacgatggtcagatgtgtagtggacgaggcaactgcatctgtgggaaatgtcagtgc
acagaacctggtgcctttggagatacttgtgagaaatgccctacctgcccaggtgtctgc
agcattaaaagggactgcattgagtgtatgctgtttaactcaggaagactggctgataac
caaacctgccaaaagcactgcagggatgagatcattacacgagtggatgttctcaaaacc
gatgacccacagtcagtcttgtgtgcttatcccgtgaaggactgtgtgatgaagttcact
tactcagaactgcccagtgggaaaaccaatattaccgtcctccaggaaccagaatgtggt
actactcctgatgcaatgaggatcttactggcagtggtgggcagcactgtacttctaggt
attattctcctggcaatttggaagttgcttgtaactattcatgaccggcgggaatttgct
agattccaaagtgagcggtcccgggcaagatatgaaatggcttccaaccctctataccgc
aagcctatttctacacatagcttagatgccacattcaacaagctcaacaggacctataat
ggtacggttgattga
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integrated database retrieval system
