Sphaerodactylus townsendi (Townsend's least gecko): 125428467
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Entry
125428467 CDS
T08213
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04010
MAPK signaling pathway
stow04020
Calcium signaling pathway
stow04260
Cardiac muscle contraction
stow04261
Adrenergic signaling in cardiomyocytes
stow04270
Vascular smooth muscle contraction
stow04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125428467 (CACNA1F)
04020 Calcium signaling pathway
125428467 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125428467 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
125428467 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
125428467 (CACNA1F)
04270 Vascular smooth muscle contraction
125428467 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125428467 (CACNA1F)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125428467 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
125428467
NCBI-ProteinID:
XP_048344565
LinkDB
All DBs
Position
LG03:145993655..146126295
Genome browser
AA seq
2084 aa
AA seq
DB search
MTECNGRPAGSPEAPARSAAEAFVEATGQALAWTLTNGGTDTLGSTGSGGQKKRLQHNKH
KTQGTNVVHRSPRALFCLRLNNPIRRAAISIVEWKPFDILILMTIFANCVALGVYIPFPE
DDSNVANHNLEQVEYIFLIIFTVETFLKILAYGLVMHPSAYIRNGWNLLDFVIVVVGLFS
VILEQFSHKAGEAHHMGGKPGGFDVKALRAFRVRPHDLCALEPILTLSGAESLHIVLNSI
MKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFIVGSDLEAEEDPSPCAFSGHGR
ECTVNNSECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGHELPWI
YFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDMKGYLDWITQ
AEDIELDEEGDEVDDKHTHLAGKKKAKKWFKHSQPSIDTQSSLAASETTSVNTENVGEEE
HHPNACYEMCLGKLAKTTFGRRVRRINRFFRKKCRLAVKSVSFYWMVLILVFLNTLTIAS
EHYNQPDWLTAIQAYANKVLLSLFTLEMLVKMYSLGLQAYFISFFNRFDCFVVCGGILET
VLVEFEIMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFII
IFSLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPY
FPGMLVCVYFIILFICGNYILLNVFLAIAVDNLADADSINASKKKGAPTEGEESNEKDET
SVKVDCGDEEKEGGNPEGGEEEEEQEEEEEEEEEEQEEQEGDQESLAESHHDKVEDTPKE
KVLPIPDGSSFFCLSKTNLLRVQCHKLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFR
NNILGYFDYAFTSIFTVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSS
AISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQ
LFKGKFYSCTDEAKHTPAECKGTFIVYKDGDVTHPMVRERLWLNSDFNFDNVPSGMMALF
TVSTFEGWPALLYRAIDANDENKGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITF
RAQGEQEYKNCELDKNQRQCVEYSLKAQPLRRYIPKNKYQYKVWYMVNSTGFEYIMFVLI
LLNTIALAVQHHEQSTPFNYVMDLLNMVFTGLFTIEMVLKIIAFKPKHYFVDAWNTFDAL
IVVGSVVDIAVTEVNNGGHVGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTF
IKSFQALPYVALLIAMIFFIYAVIGMQTFGKVALQDYTPINRNNNFQTFPQAVLLLFRCA
TGEAWQEIMLACMPGKRCDPESDYEPGEEFTCGSYFAIVYFISFFMLCAFLIINLFVAVI
MDNFDYLTRDWSILGPHHLDEFKRIWSEYDPAAKGRIKHLDVVALLRRIQPPLGFGKLCP
HRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTDGELEVANKELRTVIKKIWKR
TKPKLLNEVIPPPEEEEVTVGKFYATFLIQDYFRKFRKRKERGLLGPDGSPSNSSALQAG
LKSLQDLGPEIRRAMSCDLEEEEEEEEADETVCEEETVTYKSSEALYSSAPECDHHQAAA
ATTSPDQENKTMANGLAGSRNPSSASLPHMTNGPTHYEENVGGGDGPTEPPNPQTRRRMS
RRSSDGGSNPPTVQKEATHAEDYAEDTSAEQGYYSREEDSESLASHDRLPSLTNPRPRRR
HWENGYGGSLPLPSRHGNSVLTNGLPESRQTKRRRLLPATPTGRKPTFNIQCLQRQGSCD
DIPIPGTYHQNAPPCRARMQGYGNYDSWHSGSHSSAASSKSWATPPKRSRLLYAPLILVE
EDSPTGRDWEQNSSSLPPMSRSRWYTEDEELPCRTYGHLHVPSPLQHSYRDKRGSADSLV
EAVLISEGLGLYARDPKFVAFAKREIADACHMTIDEMESAATDLLSRKRPGGESGTRGSS
HTAYSSDGEHSGVGSFGPIYSDEEPYRSREEEDLADEMACVTSY
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtgcaacggaagaccggctggcagtcctgaggcgccagcccgttcggcagct
gaggcttttgtggaggcgacgggtcaggccctggcatggacgctcaccaatgggggtaca
gatactctgggctcaacaggcagtggtggacagaagaagcgtctgcagcacaacaaacat
aagacccagggcaccaacgtggtacatcgatctccacgagccctcttctgcctcaggtta
aacaaccccattcgccgggctgctatcagtatcgttgaatggaaacccttcgacattttg
attctcatgaccatctttgctaactgcgtggccttaggggtctatatccctttcccagag
gatgactccaatgtcgccaaccacaacttggagcaagtggagtacatctttctcatcatt
ttcacggtggagacgttcctcaagatccttgcctacggtctggtcatgcatcccagtgcc
tatatccgcaacggctggaaccttcttgactttgtcatcgttgtggtggggctgttcagt
gtgatcttagaacaattttcacacaaggccggtgaagcccatcacatgggtgggaagcct
ggaggttttgatgtcaaggctttgagagcattccgcgtcaggcctcacgacctctgcgcc
ctggaacccattctaacattgagtggggcagagagcctgcacatcgtcttgaactccatc
atgaaggccatggtgcccctcttgcatattgccctgctggtcctctttgtcatcatcatc
tacgccatcatcggcctggagctgttcatcgggcgcatgcacaagacctgcttcatcgtt
ggctctgacctggaagctgaggaggacccctccccttgtgccttctccgggcacggtcgg
gaatgcacagtgaacaacagcgagtgccgcggcaagtgggaaggacccaatgggggcatc
accaactttgacaacttcttctttgccatgctgactgtcttccagtgcatcaccatggaa
ggttggacggatgtactctactggatgcaggatgcaatgggtcacgagctgccatggatt
tactttgttagcctcgtcatctttggctccttcttcgtcctcaaccttgttttgggtgta
ctgagtggagaattctccaaggagcgagagaaggccaaagcccggggcgacttccaaaag
ctacgggagaagcagcaaatggaggaggacatgaagggttacctggattggatcacacag
gctgaagacattgagctcgacgaggaaggggacgaggtggatgacaaacacacccatctg
gcggggaagaagaaagccaagaaatggttcaaacacagccagccctccatcgacactcag
tccagtcttgcagccagcgaaaccacgtccgtgaacacagagaacgttggggaagaagag
catcatccgaacgcttgctatgaaatgtgcttaggcaagctcgcaaagaccacatttggc
cgccgagtgcgacgcatcaaccgttttttccggaaaaagtgccgcctggctgtcaaatcg
gtctctttctattggatggtcctgatcctggtctttctcaacaccctcactatcgcctcg
gagcattacaaccagcccgattggctcacagcgatccaagcttatgccaacaaggtgctt
ctgtcgctgttcaccctggagatgcttgtgaagatgtacagcctgggcttgcaagcctac
ttcatcagtttcttcaaccgcttcgactgctttgtggtgtgtggtgggattctggagacc
gtcttggttgagtttgaaatcatgcagcccctggggatctccgttcttcgctgcgtccgc
ctcctgcggatcttcaaggttaccaggcactgggcctcgctaagcaacctggtggcctcc
ttgctgaactccatgaagtccatcgcctctttgcttctcttgctcttcctcttcatcatc
atcttctccttgctcggcatgcagctttttgggggcaagttcaacttcgacgagacccag
acgaagcgcagcacttttgacactttcccccaagcgctgctcaccgtcttccagatcctg
actggcgaggactggaatgcagtgatgtatgatggcatcatggcctacggcggcccctat
ttcccaggcatgttggtctgtgtttatttcatcatcctcttcatctgtggaaactatatc
ctcctcaacgtcttcttggccattgctgtggacaatcttgccgatgcggacagcatcaat
gcctcaaaaaagaaaggggccccaacagaaggggaggagagcaatgagaaagacgagacg
agtgtgaaggtggactgtggcgacgaagagaaggaaggaggcaatccggaaggaggtgag
gaggaggaagagcaggaggaggaggaggaggaggaggaagaagagcaggaggaacaggaa
ggagaccaagagagcttagcagaatctcaccatgacaaagtagaggatactcccaaggag
aaagtgctgccgattcctgatggaagctctttcttctgcctcagcaagacgaacctgctt
cgggttcagtgccacaagctgatccaccatcacatcttcaccaacctcatcctcgtcttc
atcatcctcagcagcatctctctggcagctgaggaccctatccgggcgcactctttccgc
aataacattctgggctactttgactacgccttcacttctatcttcactgttgagattctg
ctcaagatgacggcttacggcgccttcctgcacaaaggctctttctgccggaactggttc
aatcttctggatctgcttgtagtcagcgtatcactcatctccttcggcatccactccagc
gccatctctgtggtgaagattttgcgagtgctgcgggtgcttcgtccgctccgagccatc
aaccgggccaaggggctcaagcatgtggtccagtgtgtgtttgtagccatccgcaccatc
gggaacattatgatagtcaccactctcttgcagttcatgtttgcatgcattggagttcag
ctgttcaagggcaaattctatagctgcacagatgaggccaagcacacgccggcagagtgc
aagggcacattcattgtgtacaaggatggggacgtaactcacccgatggtgcgcgaacgc
ctctggctgaacagtgacttcaacttcgacaatgtcccctcgggcatgatggccctcttc
accgtctccacttttgagggctggccagcgctactgtacagggccattgatgccaatgat
gaaaacaaaggccccatctacaactaccgagtggagatctccatcttcttcattgtctat
atcatcatcatcgcgttcttcatgatgaacatcttcgtgggctttgtcatcatcacgttc
cgagcccagggggaacaagaatacaagaattgcgagcttgataagaaccagaggcagtgc
gtggagtattccctgaaggcccagccattgcgccgctatatccccaagaacaaataccag
tacaaggtctggtacatggtcaactccacgggctttgagtatatcatgttcgtgctcatc
ctgctcaacaccatagcactggctgtacagcaccacgaacagtcgacacccttcaactac
gtgatggacctgctcaacatggtcttcacgggcctcttcaccatcgaaatggtgctgaaa
atcattgccttcaagcccaagcactactttgtcgacgcatggaacacttttgatgccctg
atcgtggtggggagtgttgtggacatcgctgtcacagaagtgaataacggaggacatgtt
ggagagagctccgaggatagttcccgcatctccatcaccttcttccgcctcttccgtgtc
atgcgtctggtcaagctgctcagcaaaggggagggcatccgcacccttctctggaccttc
atcaaatccttccaggcacttccgtatgtcgctcttctcattgccatgatcttctttatc
tacgccgtcattggcatgcagacctttgggaaagtggcgttgcaggattacacgccgatc
aaccgcaacaataacttccagacctttccgcaggccgtgctgctgctcttcaggtgtgcc
acaggggaagcttggcaggaaatcatgctggcctgcatgcccggcaaacgctgcgatcca
gagtccgattacgagcctggggaagagttcacctgtggcagctacttcgccattgtttat
ttcatcagcttcttcatgctttgtgccttcctaatcattaacctctttgttgctgtcatc
atggacaattttgactatctaactcgagactggtccattctgggtccccaccatctcgat
gagttcaagcggatctggtcagaatatgacccagctgcaaagggtcgcatcaagcaccta
gatgtggtggccctgctacgacggatacagccacccttgggttttgggaaactctgcccc
caccgtgtagcctgcaagaggttggtggcgatgaacatgcccctcaactcagacgggact
gtcaccttcaacgctaccctctttgctctggtgcggacatccctcaagatcaagacggac
ggtgagctggaggtggccaataaggagctccgcactgtcatcaaaaaaatctggaagcgg
actaagcccaaactactgaatgaggtgatccccccgccggaagaggaggaagtcactgtc
gggaagttctacgccacattcttgatccaggattatttccggaagttccggaagcggaag
gagagggggctgctggggccagacgggtccccgagcaactcttctgctctgcaggcagga
ctgaaaagtttgcaagacctgggacccgaaatccgccgggcgatgtcctgcgacctggaa
gaagaggaggaggaggaggaagcagatgagacagtgtgcgaagaagagacagtgacctac
aagagttctgaagcattatatagcagcgctcccgaatgtgaccaccaccaggccgcagct
gccacaacgtcgcctgatcaggaaaacaagaccatggccaacggcctggcgggctcccgc
aacccctcaagcgccagccttccccacatgaccaacgggccaacccactacgaggaaaac
gtcggcggcggtgatgggcccaccgagccgccaaacccccagacccgtcgcaggatgagc
agacgtagctcagacggcggcagcaacccaccaacagtgcaaaaagaagccacgcatgcg
gaagattatgcggaggacacctcagctgagcaaggatactacagtcgagaggaggactca
gagagcttggcctcccacgacaggctgcccagcttgaccaaccctcggccccgccggcgt
cactgggaaaatggctacggtggatcgttgcccctccccagccgtcacggcaacagcgtg
ctcaccaacggactaccggagagcaggcaaaccaagcgcaggcgcctcttgcccgccaca
cctacaggccgcaaaccgaccttcaacattcagtgtctgcagcgccaaggcagctgtgat
gatatccccattccaggcacctatcaccagaacgcgcccccctgcagagcgcgcatgcag
ggctatggcaactacgattcatggcacagtggcagccactcctcagcggcgtcctcgaag
tcgtgggcgacgccgcccaaacggagccggctgctttatgccccgctgatcctggtggag
gaggacagccccaccggccgcgactgggagcagaacagcagcagcctcccgcccatgtcg
cggtcccgctggtacacggaggacgaggagctgccctgccgcacctacggccacctccac
gtgcccagcccgctccagcacagctaccgagacaagcgggggagcgcagacagcctggtg
gaggcggtgctcatctctgaaggcttgggcctttatgcccgggacccaaagtttgtggcc
tttgccaagcgggagattgctgacgcttgccacatgaccatcgacgagatggagagcgcc
gccacggaccttctgagccgcaaacgccccggtggcgaaagcggcacccgcgggagcagc
cacacggcgtacagcagcgacggggagcacagcggggttggcagcttcggccccatttac
agcgacgaggagccctaccgttcccgcgaggaagaggacttggccgacgagatggcctgc
gtcacctcttattga
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integrated database retrieval system
