Sphaerodactylus townsendi (Townsend's least gecko): 125429247
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Entry
125429247 CDS
T08213
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125429247 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125429247 (DDX23)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125429247 (DDX23)
Spliceosome [BR:
stow03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125429247 (DDX23)
Complex C
U5 SnRNP specific factors
125429247 (DDX23)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
125429247
NCBI-ProteinID:
XP_048346140
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Position
LG03:141341980..141361642
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AA seq
821 aa
AA seq
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MAGETTEKRERDSSPVKEERRRSRSPDRERDRDRDRKGSPIAKDRKRHHPVPQAGGGITR
VPTGPKSTERERRYKERERDKERERSKKDREREKDGHRRDKDRKRSRSVSPNRSKDSKSR
KDRDSHRDEEDDAGGKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQ
EVEERQRLLEDERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIRE
EKDKSKELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLL
GRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQ
KKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQR
QAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRE
LAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLV
LSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKY
RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL
EQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILV
ATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAISFVTKEDSAVFYDL
KQAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggccggggaaaccactgaaaagagagagcgggattcttcacctgttaaagaagagcga
agacgctcacgctcaccagaccgagaacgtgaccgagatcgtgataggaaaggctctcct
attgccaaggacaggaagcgtcaccaccctgttcctcaagctggaggagggatcacccgg
gtccccacaggtcccaagtcaacagagagggaacgacgatataaagagagggaacgagac
aaagaacgggagcgcagcaagaaagaccgggagcgggagaaggatggacatcgaagagac
aaggacaggaaacgctccagaagtgtctctccaaatcgcagcaaagactccaaatccagg
aaggacagagattctcacagggatgaagaggatgatgcagggggcaaaaaggaaaaggca
cagccactgtccctggaggagctgctggctaagaaaaaggctgaggaagaggctgaagcc
aagcccaagttcctttccaaagcagaacgggaagctgaggccttgaagcgccggcagcag
gaggtagaggaacgacaacggctgttggaggatgagaggaaaaaaagaaaacagtttcaa
gagatgggcaggaagatgttggaggacccccaggagagggagcgacgtgagcggagggaa
cgtatggaacgggagaccaatggcaatgaagatgaggaggggcggcagaagatccgtgag
gagaaagacaagagcaaggaactgcatgccatcaaggagcgatacctgggtggtgtaaaa
aaacggaggcgcacccggcacctgaatgaccgcaagtttgtctttgagtgggatgcttca
gaagacacttccattgactacaatcccttatacaaagagcgacaccaggttcagctgctg
ggacgtggctttattgctggcattgatttaaagcagcagaaacgggaacagtcccgcttt
tatggagacctgatggagaagcggcgcacactggaggagaaagagcaagaggaggctcgt
ctgcgcaagttgcgtaaaaaggaagccaagcagcgctgggatgatcggcattggtctcaa
aagaagctggatgagatgaccgatagggactggcgaattttccgggaggattacagcatc
acaaccaagggaggcaagatccctaaccccatccgttcctggaaggactcctcgttgccc
cctcacatattggaggttattgacaaatgtggctacaaggaacctactcctatccagcgt
caagccatccctattggtctgcagaaccgtgatatcattggtgtggctgagactggcagt
ggtaaaactgctgccttccttatcccactgctggtatggatcaccaccctgcccaagatt
gacaggattgaggagtctgatcagggcccctatgcgatcatcctggcccccacccgtgag
ttggctcaacagattgaggaagagactatcaaatttggaaagcctctgggaatccgcaca
gttgcagttattggtggcatctctcgtgaggaccaaggcttccggctgcgcatgggctgt
gagattgttattgccactcctggccgtctcattgatgtgctggagaaccgttacctggtg
ctgagccgctgcacctatgtagttttggatgaggctgaccgcatgattgacatgggcttt
gagcctgatgttcagaagatcttggaacacatgcctgtcaccaaccagaagcctgacact
gatgaggccgaggaccctgagaagatgctggccaattttgaatcgggcaaacacaaatac
cgacagacggtgatgttcacagccaccatgccacctgctgtggagcgtctggcccgcagt
tatcttcgccggccagctgtggtgtacattggctcagctgggaaaccacatgagcgggtg
gaacagaaagtcttcctcatgtcggaatcagagaagaggaagaaattgctggctattttg
gagcaaggctttgatccacccatcattatatttgtcaaccagaagaagggctgtgatgta
ctggccaaatctctggagaagatggggtataatgcctgtactcttcatggtggcaaaggt
caggagcagcgagagtttgctctctccaacttgaaggctggtgccaaggatattctggtt
gccacagatgtggctggacgtggtattgacatccaggacgtgtccatggtggtgaactat
gacatggctaagaacatagaagattatatccatcgcattggtcgaacaggaagagctggc
aagagtggtgtggctatctcgttcgtcaccaaggaggactctgctgtcttctatgacctc
aagcaggccatcctcgagagccccgtgtcctcctgcccaccagaactggccaaccaccca
gatgcccagcacaaaccagggaccatcctcaccaagaagcgacgagaggagacgatcttt
gcctga
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