Sphaerodactylus townsendi (Townsend's least gecko): 125435812
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Entry
125435812 CDS
T08213
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125435812 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125435812 (SNRNP40)
Spliceosome [BR:
stow03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125435812 (SNRNP40)
Complex C
U5 SnRNP specific factors
125435812 (SNRNP40)
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GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Cytochrom_D1
WDR54
WD40_like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
125435812
NCBI-ProteinID:
XP_048358173
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Position
LG06:complement(112595315..112613592)
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AA seq
359 aa
AA seq
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MIDPQKRKAPGPEMALVAAASAAKKPRQELKLGAGPAGGQPPPGALLQAGPPRCSSLQAP
IMLLSGHEGEVYCCKFHPNGATLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN
TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL
WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSV
TGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKILQGNVHNFEKNLLRCSWSPDGS
KIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPEEPIILSASSDKRLYMGEIQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccgcagaaacggaaggcccccgggccggagatggctttggtggcggcggca
tccgcggccaagaagccacgccaggagctgaaattaggagcggggcctgccggagggcag
ccacctccgggggccttattgcaggcgggtccaccgcgatgttcctccctccaggcaccc
ataatgctcctttcagggcacgaaggtgaagtgtactgttgtaaatttcatcctaatgga
gccaccttagcatcagctggatttgacaggctaatcttactgtggaatgtgtatggtgac
tgcgataattatgccaccctgaaaggacatagtggagccgttatggagctgcattacaac
acagatggcagcatgttattctctgcctctacggacaaaacagtagccgtgtgggacagc
gagaccggcgagagggtgaaaaggctcaaagggcacacgtcgtttgtgaactcctgttat
ccagcccggcgtgggcctcagttggtgtgcacaggcagcgatgatggcacagtaaagtta
tgggacatcaggaaaaaagccgctgtccagacttttcaaaacacttaccaagtcttagct
gtcacgttcaacgataccagtgaccagataatatctggaggcatagacaatgacatcaag
gtgtgggaccttcgacagaataaactgacctatacaatgagaggacatgcagactctgtc
accggtctcagtctgagttcagaaggctcgtacttgctttccaatgcaatggacaataca
gttcgcatctgggatgttcgccccttcgcccctaaagagagatgtgtcaagatccttcaa
gggaacgtgcataattttgaaaagaatctgctgcggtgctcctggtcaccagatggaagc
aaaatagcagctgggtcagcagacaggttcgtttacgtgtgggatacaacctccagaaga
attctctacaagctgccaggccatgctggttcaataaacgaagtagcttttcatcctgag
gaaccaatcattctgtcggcgtctagtgacaaaaggctgtatatgggagaaatccagtga
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