Sphaerodactylus townsendi (Townsend's least gecko): 125437472
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Entry
125437472 CDS
T08213
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125437472 (JMJD1C)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125437472 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
FAS_pseudo-KR
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
125437472
NCBI-ProteinID:
XP_048360992
LinkDB
All DBs
Position
LG08:complement(21684590..21854405)
Genome browser
AA seq
2521 aa
AA seq
DB search
MAVVVESRPELVGKRFLCVCGEEPPEKGRWRAGVIRTVSHRDSHSPELSVYVEFDDLAWE
KREWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKHIQWPALTFKPLVGKSVYSSITA
VEFLVDKQLDFVTEDSAFQPYQDDVDSLNPVLRDNLQLQEEVKIWVKEQKVQEIFMQGPY
SLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFLDDVV
HSLLKGENIGITSRRRSRSNQNSNTAHGHYTRAQANSPRPAMNSQSSTPKQNSHQQQRNT
RPNKRKGSDSSVPDEEKIKEEKYDYISQGENLKNKNKLFLSKRRKPEDEEKKLSMKRQRT
DNTSDYSESSDSENSNKRLTDSSSEQNSENESKSKSTSKVNGEDGKSQSSSVAEEQALSQ
SPWHEKQEDKKPQEIQSPKSADLELHDISLHQAEQLSIYDRSANDVHIQEDGIDKQNPRE
LLPNEQFIPNSPTSKSYIDMNIENNSTTESQENISSTFGLQGCLKMEPHGKDIKHLFTNA
NFPEVRKSEIDENWVNNASKMDLLQLKVMKSTSAGDYLHSEKEKVQYGSASSLTVISIAE
EGRVRKQSPVSEALKSKPGHLVDNSKIKSSSLPDVKYKHAQSPDTVKSKLNYQNNHVTGV
TRSAIKTEHDLPRSSFHPVPARVSSLEATKSPLIIDKNEHFTVYRDPALIGQETGTNHIS
PYLHQHNYPPHSSSHRTCLNPNTHHPTLTGASHLLAGSSNQTPLSSISTHPLSGASHHSV
HHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSSHLLGQAHP
SASYNHLGLYPIIWQYPNGTHAYSGLGIPSSKWVHPETSVNTETPLRRNTPSPWLHQPTP
VTSSDSLGLLSHIPVRPSSAEPHRSLKLTTHSSPPLSKSIVDHHKEEMERKGIFEPLRSV
TTTPAKSDLEHNRTQNVKEGHLQRHFVDPLQRSLQETGERLSKYKEEHRRILQESIEVAP
FTAKVKTLEGERETYSRIMPLSSSSPKSHGIKHEKDSELYKMKHSVPQSLPQSNYFTTLS
NSVVNEPPRTYSSKEVSGMSADKPSSCPSTTASAQSLASFTSSLSKPPPLIKHQPEAESS
ASKITDQLAQQAPSHSMNSFRNDSRSPTQLSVSSASTLRTMPALHRAPVFHPPVHHSLER
KEGSYNSLSPPTLTPVQPVNAGSKIHELQKPPTLVPEPKEAQSIYKSALEQKISDMWKSG
DNPNHDKMEWHIERTSGKSPSATASVIVRPPSSSKYDTMSVVQSAPKERIQERLLTGATQ
TDCLKPAEARETGRIIQLNTSSDTIHTQYDKNIPVATQGNIPCSVMPATVILCSTKTVAT
TSVVTTGISSLVGSEVTYCSSNTTLSCTSVESTASRAITQEVTQVRESSVSTVAPVIPAS
SKTESAVQASSGFSGPSDFIHLKKHKAALAAAQFKSSSASDAESSAVKNQLYPASVSLDS
TVISSTMNKANAVGNGQVSQMSQANYHTKLKKAWLTRHSEEDKNTNKKENSGNSVSEIIK
PCSVNLIASTSNDLQNSVDSKMLGEKLVKEEKHTRRKTKRTYESGSESGDSDESESKSEQ
RTKRQPKPTYKKKQNDLQKKKGDAEEEVKPNGILSRSAKEKSKLKLQSSSNNTGIPRSVL
KDWRKVKKLKQTGESFLQDDSCYEIGPNLQKCRECRLVRSKKGEESAHSPVFCRFYYFRR
LSFSKNGVVRIDGFSSPDQYDDEAISLWTHENDDDDEVDIEVCKYILQHIGDNFCQLVSS
EKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKS
SRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLMELLEAMHTLREKHEIKSHCQCASKQ
NLQVGKFPSMNGVSQVLQNVLNHSNKISLCIPESQQQKASQKSETNGNTSPGSDVSTDSK
LTPPESQSPLHWLADLAEQKAREEKKENKDCPLGKHAKEEQDQDSSESLNCKMSTPLSQN
NEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSSGTANSKGGRTMPNILDDIIASVVEN
KIPPNRTPKINVKSEGKDEPKDDRRFTTDDCSVLYSDIPHSWICDKYVLWLRDHKNCNNW
KLFRDCWKQGKPVLVSGVHKKLNASLWKTDLISSDFSDLKVDILNCKDSITSSGNVKEFW
DGFEEVSKRQKIKNGESVVLKLKDIPSGEDFKTMMPARYEDLLESLPLPEYCNPEGKYNL
ASYLPSFFVRPDLGPRLCSAYGVTAAKDHDIGTTNLHIEVSDVVNILVSVGIAKGNGVPS
KSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKITEEQGLDVLP
EHDPIRDQSWYMNKKLRQRLFEEYGIKNCTLIQFLGDAVVLPAGTLHQVQNFHSCIQVTE
DFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKISEHETEDMEK
N
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggttgtggagtcgcggccggagctggtggggaagcggttcttgtgcgtctgc
ggagaggagccgccggagaaggggcgttggagagctggcgtgatccgcaccgtctcccac
cgggactcccacagcccggagttgtcggtatatgtggaatttgatgaccttgcatgggaa
aaacgagaatgggttaaagtttatgaagattttgcagccttcctggtggagtaccagctg
gtctgggcaaagagaaaggatcctagccagactcagggatcaaagatcaagcatattcag
tggcctgcattgacattcaaacctttggttggaaaaagtgtatacagttctatcactgca
gttgaattccttgtggacaaacagctggattttgtaactgaagatagtgcctttcagccc
tatcaggacgacgtagacagtttaaacccagtgctcagggacaacctacagcttcaggaa
gaagtaaaaatctgggtaaaggaacaaaaggtgcaagagatttttatgcaaggtccatat
tccttaaacggctacagggtgagagtatacagacaggactctgccacccagtggttcact
ggtataattactcaccatgatctcttcactcgtacaatgatagttatgaatgatcaggtg
ctagaaccacaaaatgttgatccatctatggttcagatgacctttctagatgatgttgtt
cactctttgctgaaaggtgaaaatattggaattacatcacggcgcaggtctcgttccaac
cagaacagcaacacagcccacgggcactatactcgagctcaagcaaatagtccccggcca
gcaatgaattcccagagttcaacaccaaaacagaattcacaccagcagcaaagaaatact
cgtccaaataaaagaaaaggttctgatagcagtgtgcccgatgaagagaagataaaagaa
gagaaatatgactatataagtcaaggagaaaatctcaaaaataaaaacaaactctttctt
tctaaacgaagaaaacctgaagatgaagaaaaaaaactgagtatgaagagacagaggaca
gacaacacctcagattactcagagagcagtgactctgaaaattcaaacaaaagattaaca
gattcttcatccgagcaaaattcagagaatgaatcgaaaagcaagagtacttcaaaggta
aatggggaagatggaaaatctcagagcagcagtgttgcagaggaacaggcactcagtcag
tctccctggcatgaaaaacaggaagataaaaaacctcaagaaatacaaagtcccaagtca
gctgatttggaactgcatgacatttcactccatcaagctgaacagctgtcaatttatgat
aggagtgccaatgatgtacacattcaagaggatgggatagacaagcaaaatcccagggag
ctcttaccaaatgaacagtttatacccaactctcctacatcaaaaagttatattgatatg
aatattgaaaataactccaccactgagagccaggaaaacatttcaagtacctttggtttg
cagggctgtctgaaaatggaaccccatggcaaagatataaaacatctgtttacaaatgca
aactttccagaagtaaggaaatcagaaatagatgagaattgggttaataatgccagcaaa
atggatttgctacagctgaaagttatgaaaagtacatcagcaggcgactatctacattct
gaaaaagaaaaagttcagtatggctctgcatcatctttaactgtcatttctatagcagaa
gagggcagagtacgtaaacaaagtccagtttcagaggctttgaagtcaaaacctggccat
ttggttgacaactctaaaatcaagtcaagttccttaccagatgttaaatataaacacgcc
cagtctccagatactgtgaagtctaaacttaattaccagaacaaccatgttactggagta
acaaggtcagcaattaaaactgagcatgatttgcctaggtctagttttcatccagttcca
gctagagttagttcattagaagctactaaaagtcctcttatcattgacaagaatgaacat
ttcacagtttacagagatcccgctcttattggacaagaaacgggaactaaccacatatca
ccatatttacatcaacataactatcctcctcattcctcttcccatagaacttgtctaaat
ccaaacacacatcatcccacattaactggtgcatcccatttattagctggatcctcaaac
caaactcctttatcatctattagtactcatcctcttagtggtgcatctcaccattctgtt
catcatccacatctacttcctgcagtgttacctggagtgcctacagcctctttgttggga
ggccatccacgactagagactgctcatgctagcagcttaagccatttggcattagcccac
cagcaacagcaacagatgctacagcaccagtcatcacatctccttggtcaagctcaccct
tctgcctcgtataatcacctaggactttatccaattatttggcagtatccaaacggaaca
catgcttactcaggacttggaataccttcatcgaaatgggtgcatcctgaaacttctgtg
aatactgagacacctctgagaagaaatactcctagtccctggttacatcagccaacccct
gtgacctcatctgacagtcttgggttactgagtcatatacctgtaaggccatccagtgca
gagccacatcggtcactcaaattgacaacacactctagtcctccactgtcaaaaagtata
gtggatcatcataaagaggaaatggaaaggaaaggtatttttgaacctttacgttccgtt
acaactactccagcaaagtctgatctagaacacaacagaacacagaatgtaaaagagggc
catttgcaaagacattttgtagacccgctgcaaaggtcacttcaagaaacaggagagagg
ttaagcaaatataaagaagaacatcggcggatacttcaagaaagtattgaggttgctcct
tttacagctaaagtcaagacacttgagggggaaagggagacatattccagaataatgcca
ttatcatcttctagccccaaaagccatggaataaagcatgagaaagattcagaactctat
aaaatgaagcattcagtaccacagagcttgccacaaagtaattattttaccaccttgtca
aacagtgtggtgaatgaaccaccaagaacttactcatccaaagaagtttcaggtatgagt
gccgataaaccaagtagttgtccttcaacaacagcttctgctcagtcacttgcttctttc
acttcatctctttcaaaaccaccacctttgattaaacatcaaccagaagctgaaagctca
gcaagcaagataactgatcaacttgcacagcaagcgccatctcactcaatgaattctttc
agaaatgactccagaagtcctacacaattgtcagtttcatccgcaagtactcttcggact
atgcctgctttacacagagcacccgttttccatcctccagtccatcacagtctggagagg
aaggaaggcagctataatagtctttctccgccaaccctaactcctgtgcagccagttaat
gccggtagcaaaatccatgaactgcaaaagcctccaactttagtacctgagccgaaagaa
gcacaaagcatatataagagtgctttggaacaaaaaatttcagatatgtggaaaagtggt
gataatccaaatcatgataaaatggaatggcatattgagagaactagtgggaaatcacct
tctgcgacagcttctgtcattgtgcgtcccccttcaagttctaagtatgataccatgtct
gtagtgcagtcagctcccaaagaacgaattcaggaaagattgttgacaggggcaacccaa
acagattgcctgaaaccagcagaagccagagaaactggaaggatcattcagctgaataca
agctcagacacaattcatactcagtatgataagaatattccagttgcaacccagggcaac
attccctgctctgtcatgcctgctacagttatactgtgcagtaccaaaacagttgcaacc
acgtctgtggtgactacaggcatttccagcctggttggttcagaagtgacttactgttca
tcaaacacaacattgtcttgcacatcagttgaaagcactgcctctagagccataacacag
gaagtgactcaagtacgagaatcctctgtaagtaccgtggctccagttataccagcctcc
agcaaaacggaaagtgccgttcaagccagctctggattctctggaccatctgattttatt
cacttgaaaaagcacaaggcagccttggctgcagctcaatttaaaagtagcagtgccagt
gatgcagagtccagtgctgtgaaaaatcagttatatcccgcctctgtttccctagacagt
actgtcatttctagtacaatgaacaaagcaaatgctgtaggcaatgggcaagtttcccag
atgagtcaagcaaactaccacacaaaactgaaaaaagcttggctcacaagacattcagaa
gaagataaaaacactaataaaaaagagaattcagggaacagtgtatcggaaattattaag
ccatgttctgttaacttaatagcttcgacgtcaaatgatttgcaaaatagcgtagatagt
aaaatgctaggggagaagcttgtgaaagaggagaaacacactaggcgaaaaacaaaaagg
acttatgaatctggctctgaaagtggtgattctgatgaaagtgagagcaaatcagagcaa
aggactaagcggcaaccgaagccaacttacaaaaagaaacaaaatgatttgcagaagaaa
aagggtgatgcagaggaagaagtaaaaccaaatggtattctcagtagaagtgccaaagag
aaaagcaaactgaagctacagagcagcagtaataacaccggcatacctcgttcagtatta
aaagactggcgtaaagtaaagaagctgaagcaaaccggagaatcctttttgcaggatgac
tcgtgctatgaaatagggcccaatttgcaaaaatgcagagaatgtagattggtgaggagt
aagaaaggtgaagaatctgcccactctccagtgttttgtagattttactactttcgtcgg
ctttcttttagtaagaacggagtagttaggattgatggcttttcttctcctgatcagtat
gatgatgaagcaataagcttatggacacatgaaaatgatgatgatgatgaagtggacata
gaagtgtgtaaatatattttacaacacataggtgacaacttttgtcagttagtatcgtct
gagaaaacagccatgtcctgggtgaaaaaggatgccaaaatagcttggaagagagcagtc
agaggagtccgtgaaatgtgtgatgcatgtgaagccactctgtttaacattcactgggtc
tgccaaaaatgtggatttgtggtctgcttagattgctacaaggcaaaggaaaggaagagt
tctagagataaagaattgtatgcttggatgaaatgcgtgaaaggacagcctcatgaccat
aaacacttaatgcccacccagattattcctggatctgttctaatggaacttctcgaagca
atgcatactcttagagaaaaacatgagattaaatcccactgtcaatgtgccagcaaacag
aatttacaagtcggcaagttcccttctatgaatggggtgtctcaggttttacagaatgtc
cttaatcacagtaataaaatttctctgtgcatccctgagtcacagcagcaaaaagcatca
caaaagtctgagactaatggtaatacaagcccagggagtgatgtaagcacggatagcaag
ttaactccacctgaatctcagtcacctcttcattggttggcagatctagcggagcaaaag
gccagagaagaaaagaaagaaaataaagactgtcctcttgggaaacatgccaaggaagaa
caggaccaagacagttcagaatctctcaactgcaagatgtcgactcctttgtctcagaat
aatgagcaggggtcaacattacgagacttgctaaccacaacagctggcaaactacgtctt
ggctctacagatgctggcattgcttttgctccagtttattcttcaggaactgcaaatagc
aaaggtggaaggactatgccaaacattcttgatgacataattgcttcagttgtagaaaac
aagattccaccaaacagaacaccaaagataaatgtgaaatctgaagggaaggatgaacca
aaggatgacagaaggttcaccacagatgactgcagtgtattgtacagtgacattccacat
tcatggatctgcgacaaatatgttttgtggcttcgagaccataaaaactgtaacaactgg
aaactatttagagactgttggaaacaagggaagcctgtattagtgtctggtgtgcacaag
aaactgaatgccagtttgtggaaaacagacttaattagttctgattttagtgatctcaaa
gttgatattttgaattgcaaagacagcattacttcaagtggcaacgtcaaggaattctgg
gatggttttgaagaagtttcaaagcggcaaaaaatcaaaaatggagagtcagttgtattg
aagttgaaagacattccttctggtgaagacttcaaaaccatgatgcctgcaagatatgaa
gatttattagaaagtttgcccctgccagagtattgtaatccagaaggaaaatataatttg
gcttcatacttgccaagcttttttgtacgcccagatctaggacccagattatgcagtgca
tatggtgtcactgctgcgaaggaccatgatataggaaccacaaatcttcatattgaagtg
tctgatgttgtgaacatccttgtcagtgttggcatagcaaaagggaatggagttccctca
aaatcaggagtattgaaaaagtttgaagaagaagatttggatgatcttctaagaaaaagg
ctgaaggattcaagtgaattgcctggtgctttgtggcacatttatgctggcaaggatgca
gacaagataagggaatttctacaaaagataacagaagagcaaggtttagatgttttacca
gagcatgatccaattcgtgatcagagctggtatatgaacaaaaaactccgtcaaagactt
tttgaagaatatggaataaaaaattgtactctcatccagttccttggtgatgctgttgtt
ttaccagctggaacactacatcaggtacagaattttcacagctgcatccaagtaactgag
gactttgtgtctccagaacatcttgtgcagtcatttcatttaacgcaggaattgaggctg
tcgaaggaagaaatcaattatgatgataagctgcaggttaaaaatatcttgtatcatgca
gttaaagaaatggtgagagctttgaagataagtgaacatgaaacagaagatatggaaaaa
aactaa
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integrated database retrieval system
