Sphaerodactylus townsendi (Townsend's least gecko): 125439890
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Entry
125439890 CDS
T08213
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04010
MAPK signaling pathway
stow04210
Apoptosis
stow04218
Cellular senescence
stow04620
Toll-like receptor signaling pathway
stow04621
NOD-like receptor signaling pathway
stow04622
RIG-I-like receptor signaling pathway
stow04623
Cytosolic DNA-sensing pathway
stow04625
C-type lectin receptor signaling pathway
stow04920
Adipocytokine signaling pathway
stow05132
Salmonella infection
stow05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125439890 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125439890 (NFKB1)
04218 Cellular senescence
125439890 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125439890 (NFKB1)
04621 NOD-like receptor signaling pathway
125439890 (NFKB1)
04622 RIG-I-like receptor signaling pathway
125439890 (NFKB1)
04623 Cytosolic DNA-sensing pathway
125439890 (NFKB1)
04625 C-type lectin receptor signaling pathway
125439890 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125439890 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125439890 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
125439890 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125439890 (NFKB1)
Transcription factors [BR:
stow03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125439890 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_5
Ank_3
Death
Motif
Other DBs
NCBI-GeneID:
125439890
NCBI-ProteinID:
XP_048365177
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All DBs
Position
LG10:complement(67811301..67888454)
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AA seq
959 aa
AA seq
DB search
MANENAYVLGEHQMFGMDQYMGMINNNVLINNDGMITSDLPIRTADGPYLQIVEQPKQRG
FRFRYVCEGPSHGGLPGASSEKNKKSYPQVKIFNYVGPAKVIVQLVTNGKQPHLHAHSLV
GKHCENGICTVNAGPKDTVVGFPNLGILHVTKKRVFDTLEARMMDCCKKGYNPGLLVHPE
LSYIQVEGGGDRQLTERERELIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRTLHPV
LSDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGVW
EGFGDFSPTDVHRQFAIVFKTPKYRDVNIIKPASVFVQLRRKSDLETSEPKPFLYYPEIK
DKEEVQRKRQKLMPNFSDSYGGSGAGAGGGGMYGGGGGNGGGAGSGYGYPPYGYSGYGGM
HFHSNSNKTGAGMKHGISSNESKREDGESCLKSSKKHSVKFKEKVEAEEGSKIGICTAAN
PEDTEISIRDSFFLEKAVELAKRHANALFDYAVTGDVKMLLAVQRHLTTVQDENGDNVLH
LAIIHLHVELLRNLLEVIADLNADDVLNMRNDLYQSPLHLAVITKQAGGVKALLKAGSDV
TLLDRHGNSVLHLATKQGDEKVLNVLLHHKEASLMKDLPNGEGLNAVHLAVLANSTSCLR
RLIAAGVDVNAQEQKSGRTALHLAVEQGNISLAGCLLLEGDANVDSVTYDGTTPLHIAAG
RGSTKLTALLKAAGANPYIENFEPLFELEDGNDKDSDDEEATPRATPLDMATSWEVYDIL
NGKPCKSKVASDDLLTQGNMKELSEDVKLQLYKLLEVPDLNKNWSMLAQKLGLGILNNAF
RLSPSPSKTLLDNYEVSGGTIGELVDALRDMDYPEAAEIIQKALSVSSSQPRQEETKGEI
CSPKFQDTESICDSGVEISLRKLSFTFSESFTSESPVTLTKLDPGYRQDNLLQGKIEAT
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgagaatgcatacgtcttgggagagcatcagatgtttggaatggaccagtac
atggggatgatcaataataatgtgctgatcaataatgatggaatgattacatctgatcta
ccaattcgtacagctgatgggccataccttcaaattgttgagcaacctaagcagagggga
tttcgtttccgatatgtttgtgaaggaccatcacatggtggacttcctggagcttcaagt
gaaaaaaacaaaaaatcatatcctcaagttaaaatcttcaattatgttggtcccgcaaaa
gtaattgttcagctggtcacaaatggaaaacagccccatctgcatgctcacagcttggtg
gggaaacactgtgaaaatggaatatgcacagttaatgcaggaccaaaagatactgtggta
ggctttccaaacttgggaatattgcatgttacaaagaagcgagtgtttgacacactagaa
gcacgcatgatggattgctgcaaaaaaggctacaatccgggacttcttgtgcaccctgaa
ctgagctacatacaagtggaaggtggaggggatagacagctcacagagcgagaaagagaa
ctcattcgccaggcagcacttcagcagacaaaagagatggacctcagtgtggtgcggctg
atgttcacggctttccttcctgatagcaccggcagctttacaagaacccttcatcctgtc
ttatctgatcctatatttgacagcaaagctcccaatgcttccaacctaaaaattgtgcga
atggaccggacagctggctgtgtgacaggaggagaagagatttaccttctttgtgacaaa
gttcagaaagatgatattcagattcgtttttatgaagaagatgaaaatggtggtgtctgg
gaagggtttggagatttttcccctactgatgtgcacaggcagtttgctatagtattcaaa
acacccaagtaccgagatgtcaatatcataaaaccagcatctgtttttgtccagctacgg
agaaaatctgacctggagacaagtgaaccaaagccttttctgtattatcctgaaatcaaa
gataaggaagaagtgcagagaaaacgacagaagcttatgcctaacttttctgatagttat
ggtggaagcggagcaggtgctggaggaggtggaatgtatggaggaggaggaggaaatggt
ggcggtgccggatcaggttatggatacccaccatatggttattctggttatggaggaatg
cacttccattccaactcaaacaagaccggtgctggaatgaaacatggaatctcaagcaac
gaatctaaaagggaggatggtgaaagttgcctgaagagcagtaaaaagcacagtgtgaaa
ttcaaggaaaaagtagaagctgaagaaggaagcaaaatcggaatttgcactgctgccaat
ccagaggacacggagattagtatacgagatagtttctttttggagaaggctgtagaactt
gctaagcgtcatgccaatgccctcttcgactatgcagtaacgggagacgtgaagatgtta
ctggctgttcagcgacaccttaccacagtccaggatgaaaatggtgacaatgtccttcac
ttagcaattattcatcttcacgtggagctgctgagaaacctcttagaagtaatagcagac
ctgaatgctgacgacgttctcaacatgagaaatgacctgtaccagagtcctctacacttg
gctgtcatcacaaaacaggcaggaggggtaaaggccttgctgaaagctgggtcagatgtg
actcttttggatcggcatgggaattcagtcttgcatctggcgaccaaacaaggggatgag
aaggtattgaatgttctgcttcatcacaaagaggcatctctgatgaaagaccttcctaat
ggtgaaggtctgaatgctgtccacctagctgtactggctaatagcacgtcttgcctcaga
cgcctcattgctgctggagttgatgtcaacgcccaggaacaaaaatctgggagaactgcc
ttgcacctggctgtcgaacaaggaaatatctctttggcaggctgccttctgcttgagggt
gatgccaatgttgacagcgttacgtacgatgggaccactccacttcacatagctgctgga
aggggttctacaaaactaacagcgcttctcaaagctgcaggtgcaaatccctacattgag
aactttgagccactgtttgaactggaagacgggaatgataaagacagtgacgatgaagag
gctaccccacgagcaacacctttagacatggcaacgagctgggaggtgtatgatatcttg
aatggcaaaccctgtaagtcaaaggtggcttctgatgaccttttgacacaagggaatatg
aaagaactgagcgaggatgttaaattacagctttacaagttgctcgaagtacctgatctg
aacaaaaactggtccatgttggctcaaaaattgggcctggggatactaaacaatgctttc
cgattgagtccttctccatcaaaaactcttctggacaattatgaggtttctggaggtaca
ataggagagctggttgatgccttgagagacatggactatccagaagctgctgaaattatc
cagaaggcattgtccgtctcatctagtcagccccgccaagaggagacgaaaggtgaaatc
tgcagtcccaaattccaagacactgaaagcatttgtgacagtggtgtagagatctccctc
cgcaaactcagctttacattttctgagtctttcaccagcgagtcaccagtgacacttaca
aaactggacccaggatacagacaggacaacttactacagggcaaaattgaagccacttaa
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