Salinispora tropica: Strop_2686
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Entry
Strop_2686 CDS
T00504
Name
(GenBank) alpha amylase, catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
stp
Salinispora tropica
Pathway
stp00500
Starch and sucrose metabolism
stp01100
Metabolic pathways
stp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Strop_2686
Enzymes [BR:
stp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Strop_2686
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_20
Alpha-amylase
Alpha-amylase_C
DUF5065
Motif
Other DBs
NCBI-ProteinID:
ABP55130
UniProt:
A4X8D0
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All DBs
Position
complement(3020891..3023059)
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AA seq
722 aa
AA seq
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METARPHPIGRTGRLVLAAALVAVGGTAVVTAATTATSARAAVVLNDSEVTANLWQWNWD
SVAAACTDHLGPAGYGAVQVAPPQESVYLPNSADGVHPWYEVYQPVSYQLESRFGNREQF
ASMVSTCHDAGVRVYVDAIVNHMAGTNNPPGTRGYAGTEFSGYDYPAVPYSGWDFHRPGD
NCPTDGSINDWDNVAQVTSCELLSLADLYTEKEYVRDTIAGYLNDLIGLGVDGFRVDAVK
HIRKDDFAAILSRLDDTVAEGRRPYVAQEIFDGANNPDLQARAFIGNGDVLDFAYAKGIR
SAFQGSVAALQNIPNWNLDAPSANVFSMVTNHDLERDGVVLSYKDGTDYVLANYFALAYP
HGKPSVFDSFTWSDRNQSPPHDGGGYVTDAVCGGTWNCLTQSTGIKGMVGWANAARSVQS
TADFTVVNDNVIGFHRGDRAWIGINDSGATATATFTTGLADGDYCDVISGAAGGAGCTGA
TVSVTGGQATVSIPANDAVAIHVNARPGATPSPTVSPTGDPTDQIATTFTVSATPGADQD
VYAVGSISELGSWAPAAAVRLTPQGGNTYRGTIDLPPSTAVEYKFIKVTSGGEVTWESGE
NRSFTTPASGTFAVTETFRGDVVSGPAIASSFHATVYTYFGQNAFVIGNVAELGSWNPDN
AVALSAADYPVWRATVDLPPNTNIEYKYLKKNPDGSVTWESGANRSFTTPATGTNTNTDT
WR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgcgagaccccatccgattggccgcaccggccgcctggtgctcgccgccgcg
ctggtcgcggtgggcggcacggcggtcgtcaccgccgcgaccaccgccacgtcagcccgc
gccgctgtcgtcctcaacgacagcgaggtgaccgccaacctgtggcagtggaactgggac
tcggtcgccgctgcctgcaccgaccaccttggccccgccggctacggcgcggtgcaggtg
gccccgccgcaggagtcggtctacctacccaacagcgcggacggggtgcacccctggtac
gaggtctaccagccggtctcgtaccagctggagagccggttcggtaaccgggagcagttc
gccagcatggtcagcacctgccacgacgcgggtgtgcgggtctatgtggacgcgatcgtc
aaccacatggccggcaccaacaacccgcccggcacccgtggctacgccggcaccgagttc
tccggctacgactacccggcggttccctatagcggatgggacttccatcgcccgggcgac
aactgcccgaccgacgggtccatcaatgactgggacaacgtcgcccaggtgaccagctgt
gagctgctctccctggccgatctctacaccgagaaggagtacgtgcgagacacgatcgcg
gggtacctgaacgacctgatcggcctcggcgtcgacggcttccgggtggacgcggtcaag
cacatccgaaaggacgacttcgcggcgatcctgagcaggctggacgacaccgtcgcggag
gggcgacgcccctacgtcgcccaggagatcttcgacggcgccaacaaccctgacctccag
gcccgagcgttcatcggcaacggcgacgtgctcgacttcgcgtacgccaagggcattcgc
tccgccttccagggctccgtcgcggcactgcagaacatcccgaactggaacctcgacgcg
ccgagtgccaacgtcttctcgatggtcaccaaccacgacctggagcgcgacggcgtggtg
ctgtcgtacaaggacggcaccgactacgtgctcgccaactacttcgccctggcctacccg
cacggcaagccgtcggtcttcgacagcttcacctggtcggatcggaaccagtccccgccg
cacgacggcggtgggtatgtcaccgacgcggtctgcggcggcacctggaactgtctgacc
cagagcaccggcatcaagggcatggtgggctgggcgaacgcggcgcgttcggtccagagc
accgccgacttcaccgtggtcaacgacaacgtgatcggcttccaccgcggggaccgggcc
tggatcggcatcaacgactccggcgccacggccaccgccaccttcaccaccggcctcgcc
gacggtgactactgcgacgtcatctccggcgccgccggaggtgccggctgcaccggcgct
acggtgagtgtcaccggcggccaggccaccgtgagtatcccggcgaacgacgccgtcgcc
atccacgtcaacgcccgccccggcgccaccccgtcaccgacggtcagccccaccggcgac
cccaccgaccagatcgccacaaccttcacggtcagcgccacgcccggcgccgatcaggac
gtctacgccgtcggcagcatctccgagctgggctcctgggctccggccgccgcggtgcgg
ctgaccccgcagggtgggaacacctaccgcggcacgatcgacctgcccccgtccaccgcg
gtcgagtacaagttcatcaaggtgaccagcgggggagaggtaacctgggagtccggcgag
aaccggagcttcaccacccccgcctccggcacattcgcggtgacggagaccttccggggt
gatgtggtttccggcccggcgatcgccagctcgttccacgccaccgtttacacctacttc
gggcagaacgcctttgtcatcggtaacgtcgcggagctgggcagttggaacccggacaac
gccgtcgcgctctccgcggctgactacccggtatggcgggcaactgtcgacctgccgccg
aacaccaacatcgagtacaagtacctgaagaagaatccggacgggtcagtgacctgggag
tccggagcgaaccggagcttcaccactccggccaccggtaccaacaccaacaccgacacc
tggcgatag
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