Salinispora tropica: Strop_2787
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Entry
Strop_2787 CDS
T00504
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
stp
Salinispora tropica
Pathway
stp00061
Fatty acid biosynthesis
stp00071
Fatty acid degradation
stp01100
Metabolic pathways
stp01212
Fatty acid metabolism
stp02024
Quorum sensing
Module
stp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Strop_2787
00071 Fatty acid degradation
Strop_2787
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Strop_2787
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stp01004
]
Strop_2787
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stp04147
]
Strop_2787
Enzymes [BR:
stp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Strop_2787
Lipid biosynthesis proteins [BR:
stp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Strop_2787
Exosome [BR:
stp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Strop_2787
Exosomal proteins of breast cancer cells
Strop_2787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PG_binding_5
Motif
Other DBs
NCBI-ProteinID:
ABP55228
UniProt:
A4X8M8
LinkDB
All DBs
Position
complement(3189084..3190640)
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AA seq
518 aa
AA seq
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MVVMLTDPLAGGAGGPALRDSAGELDWSALDARVNRWVRLLRAENLQVGDTMAVVCGNRR
ETFEVLLAALHTGVTVVPVNWHLTAPEITYLLSDSASRLVLTEPRYAAVVAEAVHSCPAP
VRAMVTGEREHAGCTPVEPLLAGLPADEPTDQVCGSILLYTSGTTGAPKGVRNGLFRVGA
PFARVDRLLAYAGRVLGVPARGAVLLVGPWYHSAQVFFALLPLLRGSRLVMHDRFDPESF
LAAVAEHRITACHLVPTQFVRLLRLPADVRAAADVGSLRMVWHGGGPCPVEVKRQMIEWW
GPVVVEYYAATEAGVVTLMDADSWLRHPGSVGRAVPPNEIVIVDDEGNPLPAGQAGRVFV
HRVGQTFEYHNAPQKTRDAHLRAGVFTYGETGYLDSDGYLYLTGRAGDVVISGGVNIYPA
EVQTVLLSHPAVRDAAVTGEPDDEYGERVVAIVEVDSARLDPERGGEVLAAFCRRSLAGF
KVPRRWRFVPELPRDGTGKLRQEVLRGLLGTEMSGGRS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggtggtaatgctgacggatccgctggccggcggcgctggcggaccggcccttcgtgac
tcggccggtgagctggactggtcagccctggatgcccgggtcaaccgctgggtccgcctg
ctgcgcgccgagaatctacaggtcggtgacaccatggccgtggtctgcggcaaccggcgt
gagacgttcgaggtgctgctcgccgccctccacaccggagtgaccgtggtgccggtcaac
tggcacctgaccgcacccgagatcacctacctgttgtcggactcggcgagccggttggtg
ctcaccgagccccggtacgcggccgtggtcgccgaggcagtgcactcctgccccgccccg
gtacgtgccatggtgaccggtgagcgggagcacgccggctgcaccccggtcgagccgttg
ctggccggactccccgccgacgagcccaccgaccaggtctgcggctccatcctgctgtac
acctcgggcacgacgggcgcgccgaagggggtgcgcaacggtttgttccgcgtcggggcg
ccgtttgcccgggtggaccgactgctcgcctacgccggacgtgtcctcggggtaccggcc
cgcggcgcggtgctgctggtggggccgtggtatcactcggcgcaggtgttcttcgcgttg
ctcccattgctgcggggcagccgcctggtgatgcacgaccggtttgacccggaatccttc
ctggctgccgtggcggagcaccgaatcaccgcctgccatctggtccccacccagttcgtc
cggctgctgcggctccccgcggatgtccgggcggcggccgacgtcggcagcctccgaatg
gtctggcacggcggtgggccgtgcccggtcgaggtgaagcggcagatgatcgagtggtgg
ggtccggtggtggtcgagtactacgcggccaccgaggccggcgtggtgaccctcatggac
gccgacagttggctacggcatccgggcagcgtcggccgtgccgtacccccgaacgagatc
gtcatcgtcgacgacgagggcaaccctttgccggccggccaggcggggcgggtgttcgtc
caccgtgtggggcagaccttcgagtaccacaatgccccgcagaagacccgagacgcgcac
ctgcgcgcgggggtgttcacctacggcgagaccggctacctggattcggacggctacctc
tacctgaccggccgggcgggggacgtcgtgatctcgggcggggtgaacatctaccccgcg
gaggtgcagacggtgttgctgtcgcacccggcggtccgggacgcggcggtgaccggcgag
ccggacgacgagtacggcgagcgggtggtcgccatcgtcgaggtggactcggcccggctc
gacccggagcggggcggggaggtgctcgccgcgttctgccgacgttcgttggcggggttc
aaggtgcccaggcggtggcgtttcgtcccggaactaccccgtgacggcaccggcaagttg
cgccaggaggtgctccgtgggttgttgggcaccgagatgtcaggaggccggtcatga
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