Streptomyces sp. CCM_MD2014: NI25_29405
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Entry
NI25_29405 CDS
T04862
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NI25_29405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_29405
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NI25_29405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH
HHH_2
GIY_YIG_domain
RecR_HhH
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AIV37095
UniProt:
A0A0N6W610
LinkDB
All DBs
Position
6642447..6644615
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AA seq
722 aa
AA seq
DB search
MADPSSYRPRPGSIPDSPGVYRFRDEHRRVIYVGKAKSLRQRLANYFQDLAHLHPRTRTM
VTTAASVEWTVVSTEVEALQLEYSWIKEYDPRFNVKYRDDKSYPYLAVTMNEEFPRVQVM
RGHKKKGVRYFGPYGHAWAIRDTVDLLLRVFPVRTCSTGVFKNAARTGRPCLLGYIGKCS
APCVGRITPDDHWDLADEFCDFMAGRTGTYLRRLERQMADAAEEMEYERAARLRDDIGAL
KKAMEKSAVVLADATDADLIAVAEDELEAAVQIFHVRGGRVRGQRGWVTDKVEEITTGAL
VEHALQQLYGEESGDAVPKEVLVPALPDPVEPVQQWLTERRGSGVSLRIPQRGDKKALME
TVQRNAQQALVLHKTKRASDLTTRSRALEEIAEALDLDSAPLRIECYDISHLQGDDVVAS
MVVFEDGLARKSEYRRFQIKGFEGQDDVRSMHEVITRRFRRYLAEKEKTGEWADGESLTD
GERHTGDGPHTGPGPHPGGEAGPAGRTAPDDGEALTHGPALKDDDGRPKRFAYPPQLVVV
DGGQPQVAAAQRALDELGIDDIAVCGLAKRLEEVWVPREDDPVVLPRTSEGLYLLQRVRD
EAHRFAITYQRTKRAKRFRAGPLDDVPGLGETRKQALIKHFGSVKRLRAATIDQICEVPG
IGRKTAETVAVALAGATPAGPAVNTATGEIMDDDDGAPETTADAPGEPVSAGTPDERRGQ
ER
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccctccagctaccgccccaggccgggatcgatcccggactccccgggggtg
tacaggttccgtgacgagcaccgccgggtgatctacgtcggaaaggcgaagagcctgcgc
cagcgcctggcgaactacttccaggacctggcgcacctgcacccgcgcacccgcaccatg
gtcaccacggccgcgtccgtggagtggacggtggtgtccacggaggtcgaggccctccag
ctggagtactcctggatcaaggagtacgacccccggttcaacgtcaagtaccgcgacgac
aagagttacccgtacctcgcggtgacgatgaacgaggagttcccgcgcgtccaggtgatg
cgcggccacaagaagaagggcgtgcgctacttcgggccgtacgggcacgcctgggcgatc
cgcgacacggtcgacctcctgctgcgcgtcttcccggtgcgcacctgttccacgggcgtc
ttcaagaacgccgcccgcaccggccgcccctgtctgctcggctacatcggcaagtgctcc
gcgccctgcgtcggccggatcacgcccgacgaccactgggacctggccgacgagttctgc
gacttcatggccggccgcaccggcacctacctgcgccgcctggagcggcagatggccgat
gccgcggaggagatggagtacgagcgggcggcgcgcctgcgagacgacatcggggccctc
aagaaggccatggagaagagcgcggtcgtgctcgccgacgccaccgacgccgacctgatc
gcggtcgccgaggacgagctggaggcggccgtccagatcttccacgtgcgcggcggacgc
gtgcgcggtcagcgcggctgggtcaccgacaaggtggaggagatcaccaccggcgccctg
gtcgagcacgccctccagcagctgtacggcgaggagagcggggacgccgtgcccaaggag
gtcctggtccccgccctgcccgacccggtcgagcccgtccagcagtggctgaccgagcgc
cgggggtccggcgtttcgttgcgcatcccgcagcgcggcgacaagaaggcgctgatggag
accgtccagcgcaacgcccagcaggcactcgtcctgcacaagaccaagcgcgcctccgac
ctgacgacgcgctcgcgcgcgctcgaggagatcgccgaggccctcgacctcgacagcgcc
ccgctgcgcatcgagtgctacgacatctcgcacctccagggcgacgacgtcgtggcctcc
atggtcgtcttcgaggacgggctggcccggaagagcgaataccggcggttccagatcaag
ggcttcgagggacaggacgacgtccgttccatgcacgaggtcatcacccgccgcttccgc
cgctatctcgccgagaaggagaagaccggcgagtgggcggacggcgagtcgctcaccgac
ggcgagcggcacaccggcgacgggccgcacaccggccccgggccgcaccccggcggcgaa
gccggcccggccggccggaccgccccggacgacggcgaggcgctcacccacggcccggcg
ctcaaggacgacgacggccggcccaagaggttcgcctacccgccgcagctcgtcgtcgtc
gacggcggacagccgcaggtcgccgccgcccagcgggcgctggacgagctgggcatcgac
gacatcgccgtgtgcggtctcgccaagcgcctggaggaggtctgggtgccccgcgaggac
gacccggtcgtcctgccccgcaccagcgaaggcctctacctgctgcagcgggtccgcgac
gaggcccaccgcttcgcgatcacctatcagcgcaccaagcgcgccaaacgcttccgcgcc
gggccgctggacgacgtgcccggcctgggtgagacccgcaaacaggcgctgatcaagcac
ttcggttcggtgaagcggctgcgggcggcgacgatcgaccagatctgcgaggtgcccggc
ataggccgcaagaccgccgagaccgtggccgtggccctggccggcgccaccccggccggg
cccgccgtgaacacggcgaccggagagatcatggatgacgacgacggggcacccgagacg
acggcggatgccccgggggagcccgtgtccgcgggcaccccggacgaacgacgggggcag
gagagatga
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