Streptomyces sp. CCM_MD2014: NI25_31625
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Entry
NI25_31625 CDS
T04862
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
strd
Streptomyces sp. CCM_MD2014
Pathway
strd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NI25_31625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strd03400
]
NI25_31625
Enzymes [BR:
strd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI25_31625
DNA repair and recombination proteins [BR:
strd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NI25_31625
RecFOR pathway proteins
NI25_31625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
nSTAND3
DUF815
Sigma54_activat
AAA_3
AAA_14
RNA_helicase
Sigma54_activ_2
AAA_19
AAA_28
TsaE
Zeta_toxin
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AIV37501
UniProt:
A0A0N6ZRY5
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All DBs
Position
7114842..7115915
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AA seq
357 aa
AA seq
DB search
MNWDDTTDAEAAAERLVGAVADGEDQAVEAALRPKDLGEFIGQEKVREQLDLVLRAARAR
GATADHVLLSGAPGLGKTTLSMIIAAEMEAPIRITSGPAIQHAGDLAAILSSLQEGEVLF
LDEIHRMSRPAEEMLYMAMEDFRVDVVVGKGPGATAIPLELPPFTLVGATTRAGLLPPPL
RDRFGFTAHMEFYGPAELERVIHRSAGLLDVEIDPTGAAEIAGRSRGTPRIANRLLRRVR
DYAQVKADGLITQEIAAAALAVYEVDARGLDRLDRGVLEALLKLFGGGPVGLSTLAVAVG
EERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLTPPRSQSSGNGQQDLFGA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggacgacacgaccgacgcggaggccgccgccgagcggctggtgggcgctgtc
gccgacggcgaggaccaggccgtggaggccgccctgcgccccaaggacctgggcgagttc
atcggccaggagaaggtgcgcgaacagctcgacctggtgctgcgcgccgcacgcgcgcgg
ggggccaccgccgaccacgtgctgctctccggcgcccccggcctcggcaagaccaccctc
tcgatgatcatcgcggccgagatggaagcccccatccgcatcacctcgggccccgccatc
cagcacgccggcgacctcgcggcgatcctctcctccctccaggagggcgaggtcctcttc
ctcgacgagatccaccgcatgtcgcggcccgccgaagagatgctctacatggcgatggag
gacttccgcgtcgacgtcgtcgtcggcaagggccccggcgccaccgccatccccctggag
ctgccgccgttcaccctggtcggcgccaccacgcgcgcgggcctgctgccgcccccgctg
cgcgaccgcttcggcttcaccgcccacatggagttctacgggccggccgaactggaacgc
gtgatccaccgctcggccggcctgctcgacgtcgagatcgaccccaccggcgccgccgag
atcgccggccgctcccgcggcaccccccgcatcgccaaccgcctgctgcgccgggtccgc
gactacgcccaggtcaaggccgacggcctgatcacccaggagatcgccgcggccgccctc
gccgtctacgaggtcgacgcccggggcctggaccgcctcgaccggggcgtgctggaggcc
ctcctcaagctgttcggcggcggcccggtcggcctgtccacgctggccgtcgccgtgggg
gaggagcgtgagacagtggaagaggtcgccgaacccttcctcgtacgggagggactgctc
gcccgcacccctcgcgggcgggtggccactccggccgcatgggcacatctcggcctcacc
ccgccgcgttcacagagttcaggaaacggacaacaggacttgttcggggcgtga
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