KEGG   Streptomyces sp. 4F: ASR50_25810
Entry
ASR50_25810       CDS       T04265                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
strf  Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:strf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:strf03016]
    ASR50_25810
Enzymes [BR:strf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     ASR50_25810
Transfer RNA biogenesis [BR:strf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ASR50_25810
 Prokaryotic type
    ASR50_25810
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD DUF2382 DinB_2
Other DBs
NCBI-ProteinID: ALV52494
LinkDB
Position
5738258..5739166
AA seq 302 aa
MTQKQTPPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTVRLGQTTVTDDAEGEITASADASRVTREAVDAGVAALTGDIMQV
PSKVSAIKIDGVRSYKRAREGEEFDIPARPVTVSSFSVYDVREAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYRLDAAKTLDQLQEKLTIMPIAEAAA
AAFPRWDVDERRARLLTNGVRLEMPEEYAGRGPVAVFGPEGRFLALVEEQRGKAKSVAVF
AS
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacccagaagcagaccccgcccgacggccttgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtggtcgccaagatgcgcggcatcgcccgcacccgccgggtcggccac
gccggcaccctcgacccgatggcgaccggtgtgctcgtcctcggcgtcgagcgggcgacc
aagctcctcggccacctggcgctgaccgagaaggagtacctcggcacggtccggctcggt
cagaccaccgtcaccgacgacgccgagggggagatcaccgcctccgccgacgcctcacgg
gtcacccgcgaggccgtcgacgcgggggtcgccgccctgaccggcgacatcatgcaggta
ccgtccaaggtcagcgccatcaagatcgacggggtgcgctcctacaagcgcgcgcgggag
ggcgaggagttcgacatccccgcccggccggtcacggtctcgtcgttctccgtgtacgac
gtccgcgaggccgtcgccgaggacggcaccccggtgctggacttggtcgtctcggtcgtc
tgctcctccggcacctacatccgcgccctcgcccgcgacctgggcgcgggactgggcgtc
ggcggccacctgaccgcgctgcgccgcacccgcgtcgggccgtaccggctggacgcggcg
aagaccctggaccagctccaggagaagctgacgatcatgccgatcgccgaggccgcggcg
gccgcgttcccccgctgggacgtcgacgaacgccgcgccaggctgctgacgaacggcgtc
cgcctggagatgcccgaggagtacgccggccgggggccggtggcggtcttcgggccggag
gggcggttcctggcgctggtggaggagcagcgggggaaggcgaagagcgtggcggtcttc
gcgagctga

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