Peterkaempfera bronchialis: C7M71_023395
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Entry
C7M71_023395 CDS
T05561
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
stri
Peterkaempfera bronchialis
Pathway
stri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7M71_023395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stri03400
]
C7M71_023395
DNA repair and recombination proteins [BR:
stri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7M71_023395
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7M71_023395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
nSTAND1
AAA_22
AAA_33
AAA_25
AAA_23
APS_kinase
ATPase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AXI79906
UniProt:
A0A345T1Q1
LinkDB
All DBs
Position
5279837..5282731
Genome browser
AA seq
964 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPHCGRPIARQTPQAIVDRVLELAEGTRFQVLSPLVRARKGEYADLFSDLQAKGYARARV
DGATVQLTEPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPQRERMFSEHLYCPYDDVSFEEMEPRSFSFNSPFGACPECTGIGTRMEVDAELVVP
DEEKSLDEGAIHPWALGHTKEYFQRLVGALATELGFRTDIPFAGLPARARKALLYGHKTQ
IAVHYRNRYGRERSYTTSFEGAVPFVQRRHSEAESDSSRERFEGYMREVPCPGCQGTRLK
PVVLAVTVQEKSIAEVAAMSISDCADFLLGLTLSAREKTIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DLGNTLIVVEHDEDTIRTSDWVVDIGPGAGEHGGKVVHSGPLAEMLANEESMTGQYLVGK
RSIATPEERRPRDRKRQLVVHGAREHNLKDVTVGFPLGTLTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRITGTDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRRLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
DVHYKGKSIAEVLDMPIEEALGFFEAVPSIARHLRTLNEVGLGYVRLGQSAPTLSGGEAQ
RVKLSSELQKRSTGRTVYVLDEPTTGLHFEDISKLIKVLSGLVEKGNTVIVIEHNLDVIK
TADWVVDMGPEGGHGGGGVVAEGTPEEIAAVGESHTGKFLRDILGDRVSDAVPAQRTRRK
RTTA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaccgcctcatcgtccgcggtgctcgcgagcacaacctgaagaacgtctcgctc
gacctgccccgcgacgcgctcatcgtcttcacggggctgtccgggtcgggcaagtcgtcg
ctggccttcgacaccatcttcgccgagggccagcggcgctacgtggagtcgctctcctcg
tacgcacggcagttcctggggcagatggacaagcccgacgtcgacttcatcgagggcctc
tccccggcggtctccatcgaccagaagtcgacctcccgcaacccccgctccaccgtcggc
accatcaccgaggtctacgactacctgcggctgctcttcgcccgcatcggcaagccgcac
tgcccgcactgcggccggccgatcgcccggcagactccgcaggcgatcgtcgaccgggtg
ctggagctggcggagggcacccgcttccaggtgctcagcccgctggtgcgggcgcgcaag
ggggagtacgccgacctcttctccgacctccaggccaagggctacgcccgcgcccgggtg
gacggcgccaccgtgcagctcaccgagccgcccaagctgaagaagcaggagaagcacacc
atcgaggtggtggtggaccgcctcaccgtgaaggagtccgccaagcgccgcctcaccgac
tcggtggagaccgcgctggggctctccggcggcatggtggtgctggacttcgtggacctc
ccggaggacgacccgcagcgcgagcggatgttctccgagcatctgtactgcccgtacgac
gacgtctccttcgaggagatggagccccggtccttctccttcaactcgccgttcggcgcc
tgcccggagtgcaccggcatcggcacccggatggaggtcgacgccgagctggtggtgccc
gacgaggagaagtcgctcgacgagggcgccatccacccctgggcgctcggccacaccaag
gagtacttccagcggctggtcggcgcgctcgccaccgagctgggcttccgcaccgacatc
ccgttcgccgggctgccggcccgggcgcgcaaggcgctgctgtacggccacaagacccag
atcgcggtccactaccgcaaccgctatgggcgcgagcgctcctacaccacctccttcgag
ggcgcggtgccgtttgtgcagcggcgccactcggaggcggagagcgactccagccgcgag
cgcttcgagggctatatgcgggaggtgccctgccccggctgccagggcacccggctcaag
ccggtggtgctggccgtcaccgtccaggagaagtccatcgccgaggtcgcggccatgtcg
atcagcgactgcgcggacttcctgctggggctgaccctgagcgcccgcgagaagaccatc
gccgagcgggtgctcaaggaggtcaacgagcggctgcggttcctggtcgacgtcggtctg
gactacctctcgctcaaccgcgccgcaggcaccctctccggcggcgaagcgcagcgcatc
cggctggccacccagatcggctccggcctggtcggtgtgctgtatgtgctggacgagccg
tcgatcggtctgcaccagcgggacaaccaccggctgatcgagaccctggtgcggctgcgc
gacctgggcaacaccctgatcgtggtggagcacgacgaggacaccatccgcacctccgac
tgggtggtggacatcggccccggtgcgggcgagcacggcggcaaggtggtccactccggg
ccgctggccgagatgctggccaacgaggagtcgatgaccgggcagtacctggtcggcaag
cggtccatcgccaccccagaggagcggcggccgcgcgaccggaagcggcagctggtcgtc
cacggcgcccgtgagcacaacctcaaggacgtcaccgtcggcttcccgctgggcaccctc
accgccgtcaccggcgtctccggctccggcaagtccaccctggtcaacgacatcctctac
acccacctggcccgggagctcaacggcgcccgctcggtgcccgggcggcacacccggatc
accggcaccgacctggtggacaaggtggtccatgtcgaccagtcgccgatcggccgcacc
ccccggtccaacccggcgacctacaccggcgtcttcgaccacatccgccgcctcttcgcg
gagaccacggaggccaaggtgcgcggctatctgccgggccggttctccttcaacgtcaag
ggcggccgctgcgagaactgctccggcgacggcaccatcaagatcgagatgaacttcctg
ccggatgtctacgtcccctgcgaggtctgccacggcgcccgctacaaccgggagacgctg
gacgtccactacaaggggaagtccatcgccgaggtgctggacatgccgatcgaggaggcc
ctgggcttcttcgaggcggtaccgtccatcgcccgccatctgcgcaccctcaacgaggtc
ggcctcggctacgtccggctcggccagtccgcaccgaccctctccggcggcgaggcacag
cgggtcaagctctcctcggagctccagaagcgctccaccggccgcaccgtctacgtcctg
gacgagccgaccaccgggctgcacttcgaggacatcagcaagctgatcaaggtgctctcc
ggcctggtggagaagggcaacacggtcatcgtcatcgagcacaacctcgatgtgatcaag
accgccgactgggtcgtggacatgggccccgagggcggccacggcggtggcggcgtggtg
gccgagggcaccccggaggagatcgcggccgtgggcgagagccacaccggcaagttcctc
cgcgacatcctcggcgaccgggtcagcgacgcggtgcccgcccagcggacccgccgcaag
cgcaccaccgcttag
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