KEGG   Peterkaempfera bronchialis: C7M71_024030
Entry
C7M71_024030      CDS       T05561                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
stri  Peterkaempfera bronchialis
Pathway
stri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:stri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C7M71_024030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stri03400]
    C7M71_024030
DNA repair and recombination proteins [BR:stri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C7M71_024030
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C7M71_024030
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_29 DnaJ_CXXCXGXG nSTAND1 AAA_16 AAA_25 Anti-TRAP AAA_22 AAA_33 AAA_28 MeaB DUF87 Viral_helicase1 Exc NTPase_1 DUF5351
Other DBs
NCBI-ProteinID: AXI80013
UniProt: A0A345T208
LinkDB
Position
5444120..5446672
AA seq 850 aa
MNDRSCLPRPAPSGAHDPFVRVRGARLHNLRRIDVDLPRDAFVAFTGVSGSGKSSLAFGT
LYAEAQRRYFESVAPYARRLLQQTGAPEVDEITELPPAVALQQRRGTPGSRSSVGTVTTL
SNLLRMLFSRAGHYPEGTTERLDSDAFSPNTPAGACPECHGLGTVHRVTEASLVPDPSLS
IRDHAIAAWPGAWQGKNLRDVVAALGHDIDRPWRELPQAERDWILFSDEQPVVTVHPVRE
AGRIQRPYQGQFMSAERYVMRAFSESRSAATRRRVLRHLESAPCPVCDGRRLRPEALAVT
FAGRDIAALAALPLTALADALRDALRDTLRDTTCDTAGSDAAAVLTQDLVARIAVLAELG
LGYLSMDRPTPTLSPGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADVEPLLAVLARL
RAAGNSLFVVEHDMDVVRRADWVVDVGPGAGGQGGRVLHSGPVAGLRDVEESATRRYLYG
PDGGQAAPARPPRRPDGWLRLRGVTLHNLRNLDVDLPLGVFTAVTGVSGSGKSTLVSLVL
ADLVAEALRARGGPAAAAPRDGQDDEDDPHGTPRAEVASAEGLDSLDRLVRVDQKPIGRT
PRSNLATYTGLFDAVRRVFAATDQARAHGYGPGRFSFNTPSGRCETCQGEGFVAVELLFL
PGTYAPCPTCHGARYNPETLRITYRGRTIADVLDLAVDEAADFLADVPAAARSLRTLRDV
GLGYLRLGQPATELSGGEAQRIKLATELQRAHRGRTLYLLDEPTTGLHPADTAVLMRQLH
GLVDAGNTVLVVEHDMAVVADADRVLDLGPGAGDDGGRVVAAGTPAQVARAPHSRTARYL
ARHLGVPGAS
NT seq 2553 nt   +upstreamnt  +downstreamnt
gtgaacgaccgcagctgccttccccggcccgcgccgtccggcgcgcacgaccccttcgtc
cgggtgcgcggcgcccgcctgcacaatctgcgccgcatcgacgtggacctcccccgcgac
gcctttgtggccttcaccggagtctccgggtcgggcaagtcgtcgctggccttcggcacc
ctctacgccgaggcccagcgccgctacttcgagtccgtggcgccgtacgcccgccggctc
ctccagcagaccggcgcacccgaggtggacgagatcaccgaactgccgcccgccgtggcg
ctccagcagcggcgcggcacccccggctcccgctcctccgtcggcaccgtcaccacgctc
tccaacctgctgcggatgctcttctcccgggccgggcactaccccgagggcaccaccgaa
cggctggactccgacgccttctcgcccaacaccccggccggcgcctgccccgagtgccac
ggcctgggcaccgtgcaccgggtcaccgaagcctccctggtgcccgacccgtcgctctcc
atccgcgaccatgcgattgccgcctggcccggcgcctggcagggcaagaacctgcgcgac
gtggtcgcggcgctcggccatgacatcgaccggccctggcgggagctgccgcaggccgaa
cgcgactggatcctcttcagcgacgagcagcccgtcgtcaccgtccacccggtgcgcgag
gccggccgcatccagcgcccctaccaggggcagttcatgagcgccgaacgctatgtgatg
cgcgccttctccgagtccaggagcgcggcgacccgcagacgggtgctccggcacctggag
agcgccccatgcccggtctgcgacggccgccgactgcggcccgaggccctggccgtgacc
ttcgccggccgcgacatcgccgccctggccgccctgccgctcaccgccctcgccgacgcc
ctgcgcgacgccctgcgcgacaccctgcgcgacaccacctgcgacaccgcagggtcggac
gccgccgccgtcctcacccaggacctggtcgcccgcatcgccgtcctggcggaactgggc
ctcggctacctcagcatggaccgccccacccccaccctctcgcccggcgaactccagcgg
ctccggctggccacccagctgcgctccggcctcttcggcgtcgtctacgtgctggacgaa
ccctcggccggcctccacccggccgatgtggaacccctgctggccgtactcgccaggctc
agggccgcaggcaactcgctcttcgtggtcgaacacgacatggacgtggtgcgccgcgcc
gactgggtggtcgacgtcggcccaggggcgggcgggcagggcggccgggtgctgcacagc
ggcccggtggccggactgcgggacgtcgaggagtcggccacccggcggtacctgtacggg
ccggacggcgggcaggccgcaccggcccgcccgccgcgccgccccgacgggtggctgcgc
ctgcgcggcgtcaccctgcacaacctgcggaacctggacgtggacctgccgctgggggtc
ttcaccgccgtcaccggggtctccggctccggcaagtccaccctggtcagcctggtcctc
gccgacctggtcgccgaggcgctgcgggcccggggcggaccggccgccgctgcgccccgg
gacggccaggacgacgaggacgacccgcacggcaccccgcgcgccgaggtcgcctccgcc
gaggggctggactccctcgaccggctggtccgggtcgaccagaagcccatcggccgcacc
ccccggtccaacctggccacctacaccgggctcttcgacgccgtacgcagggtcttcgcc
gccaccgaccaggcccgcgcccacggctacggccccgggcggttctccttcaacacgccc
tccggccgctgcgagacctgccagggcgaggggttcgtcgcggtggaactgctcttcctc
cccggtacctacgccccctgccccacctgccacggcgcccgctacaaccccgagaccctg
cggatcacctaccggggccggaccatcgccgatgtgctggacctggccgtggacgaggcc
gccgacttcctcgccgacgtacccgccgccgcccgctcgctgcgcaccctgcgtgacgtt
gggctcggctatctgcggctgggccagcccgccaccgaactctccggcggcgaggcacag
cggatcaagctggccaccgaactccagcgggcccaccgtggacggaccctctatctgctg
gacgagcccaccaccggcctccacccggccgacaccgccgtgctgatgcgccagttgcac
ggcctggtcgacgccgggaacaccgtgctggtcgtcgagcacgacatggccgtggtggcg
gacgctgaccgggtcctggacctgggccccggagcgggcgacgacggtggccgggtggtc
gccgccggtacccccgcccaggtggcccgcgccccgcacagccgcaccgcccgctacctc
gcccgccacctcggcgtcccgggcgccagctga

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