Peterkaempfera bronchialis: C7M71_024030
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Entry
C7M71_024030 CDS
T05561
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
stri
Peterkaempfera bronchialis
Pathway
stri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7M71_024030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stri03400
]
C7M71_024030
DNA repair and recombination proteins [BR:
stri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7M71_024030
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7M71_024030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_16
AAA_25
Anti-TRAP
AAA_22
AAA_33
AAA_28
MeaB
DUF87
Viral_helicase1
Exc
NTPase_1
DUF5351
Motif
Other DBs
NCBI-ProteinID:
AXI80013
UniProt:
A0A345T208
LinkDB
All DBs
Position
5444120..5446672
Genome browser
AA seq
850 aa
AA seq
DB search
MNDRSCLPRPAPSGAHDPFVRVRGARLHNLRRIDVDLPRDAFVAFTGVSGSGKSSLAFGT
LYAEAQRRYFESVAPYARRLLQQTGAPEVDEITELPPAVALQQRRGTPGSRSSVGTVTTL
SNLLRMLFSRAGHYPEGTTERLDSDAFSPNTPAGACPECHGLGTVHRVTEASLVPDPSLS
IRDHAIAAWPGAWQGKNLRDVVAALGHDIDRPWRELPQAERDWILFSDEQPVVTVHPVRE
AGRIQRPYQGQFMSAERYVMRAFSESRSAATRRRVLRHLESAPCPVCDGRRLRPEALAVT
FAGRDIAALAALPLTALADALRDALRDTLRDTTCDTAGSDAAAVLTQDLVARIAVLAELG
LGYLSMDRPTPTLSPGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADVEPLLAVLARL
RAAGNSLFVVEHDMDVVRRADWVVDVGPGAGGQGGRVLHSGPVAGLRDVEESATRRYLYG
PDGGQAAPARPPRRPDGWLRLRGVTLHNLRNLDVDLPLGVFTAVTGVSGSGKSTLVSLVL
ADLVAEALRARGGPAAAAPRDGQDDEDDPHGTPRAEVASAEGLDSLDRLVRVDQKPIGRT
PRSNLATYTGLFDAVRRVFAATDQARAHGYGPGRFSFNTPSGRCETCQGEGFVAVELLFL
PGTYAPCPTCHGARYNPETLRITYRGRTIADVLDLAVDEAADFLADVPAAARSLRTLRDV
GLGYLRLGQPATELSGGEAQRIKLATELQRAHRGRTLYLLDEPTTGLHPADTAVLMRQLH
GLVDAGNTVLVVEHDMAVVADADRVLDLGPGAGDDGGRVVAAGTPAQVARAPHSRTARYL
ARHLGVPGAS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaccgcagctgccttccccggcccgcgccgtccggcgcgcacgaccccttcgtc
cgggtgcgcggcgcccgcctgcacaatctgcgccgcatcgacgtggacctcccccgcgac
gcctttgtggccttcaccggagtctccgggtcgggcaagtcgtcgctggccttcggcacc
ctctacgccgaggcccagcgccgctacttcgagtccgtggcgccgtacgcccgccggctc
ctccagcagaccggcgcacccgaggtggacgagatcaccgaactgccgcccgccgtggcg
ctccagcagcggcgcggcacccccggctcccgctcctccgtcggcaccgtcaccacgctc
tccaacctgctgcggatgctcttctcccgggccgggcactaccccgagggcaccaccgaa
cggctggactccgacgccttctcgcccaacaccccggccggcgcctgccccgagtgccac
ggcctgggcaccgtgcaccgggtcaccgaagcctccctggtgcccgacccgtcgctctcc
atccgcgaccatgcgattgccgcctggcccggcgcctggcagggcaagaacctgcgcgac
gtggtcgcggcgctcggccatgacatcgaccggccctggcgggagctgccgcaggccgaa
cgcgactggatcctcttcagcgacgagcagcccgtcgtcaccgtccacccggtgcgcgag
gccggccgcatccagcgcccctaccaggggcagttcatgagcgccgaacgctatgtgatg
cgcgccttctccgagtccaggagcgcggcgacccgcagacgggtgctccggcacctggag
agcgccccatgcccggtctgcgacggccgccgactgcggcccgaggccctggccgtgacc
ttcgccggccgcgacatcgccgccctggccgccctgccgctcaccgccctcgccgacgcc
ctgcgcgacgccctgcgcgacaccctgcgcgacaccacctgcgacaccgcagggtcggac
gccgccgccgtcctcacccaggacctggtcgcccgcatcgccgtcctggcggaactgggc
ctcggctacctcagcatggaccgccccacccccaccctctcgcccggcgaactccagcgg
ctccggctggccacccagctgcgctccggcctcttcggcgtcgtctacgtgctggacgaa
ccctcggccggcctccacccggccgatgtggaacccctgctggccgtactcgccaggctc
agggccgcaggcaactcgctcttcgtggtcgaacacgacatggacgtggtgcgccgcgcc
gactgggtggtcgacgtcggcccaggggcgggcgggcagggcggccgggtgctgcacagc
ggcccggtggccggactgcgggacgtcgaggagtcggccacccggcggtacctgtacggg
ccggacggcgggcaggccgcaccggcccgcccgccgcgccgccccgacgggtggctgcgc
ctgcgcggcgtcaccctgcacaacctgcggaacctggacgtggacctgccgctgggggtc
ttcaccgccgtcaccggggtctccggctccggcaagtccaccctggtcagcctggtcctc
gccgacctggtcgccgaggcgctgcgggcccggggcggaccggccgccgctgcgccccgg
gacggccaggacgacgaggacgacccgcacggcaccccgcgcgccgaggtcgcctccgcc
gaggggctggactccctcgaccggctggtccgggtcgaccagaagcccatcggccgcacc
ccccggtccaacctggccacctacaccgggctcttcgacgccgtacgcagggtcttcgcc
gccaccgaccaggcccgcgcccacggctacggccccgggcggttctccttcaacacgccc
tccggccgctgcgagacctgccagggcgaggggttcgtcgcggtggaactgctcttcctc
cccggtacctacgccccctgccccacctgccacggcgcccgctacaaccccgagaccctg
cggatcacctaccggggccggaccatcgccgatgtgctggacctggccgtggacgaggcc
gccgacttcctcgccgacgtacccgccgccgcccgctcgctgcgcaccctgcgtgacgtt
gggctcggctatctgcggctgggccagcccgccaccgaactctccggcggcgaggcacag
cggatcaagctggccaccgaactccagcgggcccaccgtggacggaccctctatctgctg
gacgagcccaccaccggcctccacccggccgacaccgccgtgctgatgcgccagttgcac
ggcctggtcgacgccgggaacaccgtgctggtcgtcgagcacgacatggccgtggtggcg
gacgctgaccgggtcctggacctgggccccggagcgggcgacgacggtggccgggtggtc
gccgccggtacccccgcccaggtggcccgcgccccgcacagccgcaccgcccgctacctc
gcccgccacctcggcgtcccgggcgccagctga
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