KEGG   Streptomyces sp. PAMC 26508: F750_0116
Entry
F750_0116         CDS       T02619                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
strp  Streptomyces sp. PAMC 26508
Pathway
strp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:strp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    F750_0116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strp03400]
    F750_0116
DNA repair and recombination proteins [BR:strp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F750_0116
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      F750_0116
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran DnaJ_CXXCXGXG AAA_16 AAA_21 AAA_29 Anti-TRAP nSTAND1 AAA_25 AAA_22 AAA_33 NACHT DUF5351 DUF4350 MeaB Viral_helicase1 cobW DUF6510 Pput2613-deam NTPase_1 DUF463
Other DBs
NCBI-ProteinID: AGJ52627
LinkDB
Position
116868..119339
AA seq 823 aa
MVDKDATDPFVHVRGASENNLRNIDVDVPRDAMVAFTGVSGSGKSSLAFGTLYAEAQRRY
FESVAPYARRLLQQVGAPHVQEVTGLPPAVALQQRRGAPSSRSTVGTITTLSNLLRMLYS
RAGTYPPQAARLEAESFSPNTAAGACPHCHGLGVVHDVAEELLVPDPSLSIREGAIAAWP
GAWQGANLRSVVSGLGVDIDRPWRRLRKKDRDWLLYTDEQPSVFIEPEEDRVDYGYQGKF
WSARKHVMHVLADSKSEKMRERALRFVRSVPCPECHGSGLRPEALAVTFAGRSIAEINAM
PLTEVGALLRPVAGRSEADATTSTARSGETTEVAVRICGDLVARVDVLLDLGLGYLSLGR
RSTTLSPGEAQRLRIATQLRSGLFGVVYVLDEPSAGLHPADAEPLLEVLERLKAAGNSLF
VVEHDMDVVRRADWVVDIGPGAGEGGGRVLYSGPVGGLERVGESATSQYLFGRAEPVDHR
PRTPHGWLHLSGVSRHNLHDVSVDIPLCVLTAVTGVSGSGKSTLVTQVLAEVVRGHLGLV
PEEPDEAQLEVDVQDASGVESFDRMVRVDQRPIGRTPRSNLATYTGMFDAVRKLYAATDE
ARARGYSAGRFSFNVAEGRCDTCQGEGFVAVELLFLPGTYAPCPTCQGARYNAATLEVTY
RGKNIAEVLGLSVDAAATFLSAVPAASRSLETLCEVGLGYLRLGQPATELSGGEAQRIKL
ATELQRARRGHALYLLDEPTAGLHPSDVALLLRQLHRLVDAGNTVVLVEHDLDTIVIADW
VIDLGPGGGEAGGRLVAAGPPAKVARARRSATAPYLAARLAGS
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggtggacaaggacgcgaccgacccgtttgtgcatgtccggggcgccagtgagaacaac
cttcggaacatcgacgtcgacgttccgcgggacgcgatggtcgccttcaccggtgtttcc
ggctccggcaagtcctcgctcgcgttcggcacgctctacgctgaggcccagcggcgctac
ttcgagtccgtagccccttacgcacgcaggctgttgcaacaggtcggtgcaccgcacgtg
caggaagtcaccggactgccaccggcggtggccctgcagcagcgacgcggggcgcccagt
tcgcgctcgacggtcggcaccatcaccacgctgtccaatctgctgcgcatgctgtattcc
cgcgccggaacctatccgccccaggccgcacggctggaggccgagtcgttctcacccaac
accgcggccggcgcctgcccgcactgccatggactgggtgtcgtgcacgacgtcgccgag
gagctgctcgtcccggacccctcgctgagcatccgcgagggggcgatcgccgcctggccg
ggtgcctggcagggcgccaacctgcgcagcgtcgtgagtggcctgggggtcgacatcgac
cggccgtggcgcaggctcaggaagaaggaccgggactggctgctgtacacggacgagcag
ccctccgtgttcatcgagccggaggaggaccgcgtcgactacggctaccagggcaagttc
tggagcgcccgtaagcacgtcatgcacgtccttgccgactccaagagcgagaagatgcgc
gaacgggcgctccggttcgtcaggagtgtgccctgcccggagtgccatggcagcggattg
cggcccgaggcgctcgccgtgaccttcgccgggcgttccatcgccgagatcaacgcgatg
ccgctcaccgaggtcggggcgctgctacggcccgtcgcggggcggtccgaggccgacgcc
accacgtcgaccgcgcgatccggtgagacgaccgaggtcgcggtccggatctgcggcgat
ctggtcgcgcgggtcgatgtactgctcgacctgggtctcggatatctcagtctcgggcgc
cgctcgacgaccctgtcgccgggcgaggcgcagcgtctgcggatcgccacgcagttgcgc
tcggggctgttcggcgtcgtctacgtcctcgacgaaccctctgcgggcctgcatccggct
gacgcggaaccgcttctggaggtgctggagcgcctcaaggcggcgggcaactcgctgttc
gtcgtggagcacgacatggacgtggtgcggcgggcggactgggtggtcgacatcggccct
ggcgcgggcgagggcggcgggcgcgtgctctacagcggcccggtcggcggtctggagcgg
gtgggcgagtcggctacgagccagtacctgttcgggcgcgccgagccggtcgatcaccgg
ccgcgcactccgcacggttggctgcacctgagcggggtctcccgccacaatctccacgac
gtgtccgtcgacataccgctctgcgtgctgacggcggtgacgggcgtgtccggttccgga
aagtcgacgctggtgacgcaggtgctcgcggaggtcgtccgcggccacctcggactcgta
cccgaggagcctgacgaggcgcagttggaggtcgacgtccaggacgcgtcgggggtcgag
tcgttcgaccggatggtccgggtcgaccaacggcccatcggccgaacccctcggtccaac
ttggccacgtacacggggatgttcgatgcggtgcgcaagctgtacgcggcgacggacgag
gccagggcgcgcggctactccgccgggcggttctccttcaacgtggccgaagggcggtgc
gacacctgccagggcgaaggattcgtcgcggtggaactgctcttcctgcctggtacctac
gcaccgtgcccgacctgccagggcgcccggtacaacgccgcaacgctggaagtgacctac
cgcggcaagaacatcgcggaagtgctggggctgtccgtcgacgccgccgctacgttcctg
tccgccgtaccggccgcctcccgcagtctggagacgttgtgtgaggtgggactggggtac
ctgcgtctggggcagcccgcgacggagctcagcggcggtgaggcgcagcgcatcaaactg
gccaccgaactgcagcgagcccgccgcggccacgcgctctacctgctcgacgagccgacg
gcggggctgcacccctcggacgtcgcactgctgctgcgacagttgcaccgcctcgtcgac
gccggcaacacggtcgtcctcgtcgagcacgatctggacaccatcgtcatcgccgactgg
gtcatcgacctcgggccgggcggcggcgaggcgggcgggcggttggtcgcggcggggccc
ccggccaaggtggcgagagcccgtcggagcgccaccgctccctacctcgcggcccggctc
gcgggctcctga

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