Streptomyces sp. PAMC 26508: F750_0116
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Entry
F750_0116 CDS
T02619
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
strp
Streptomyces sp. PAMC 26508
Pathway
strp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
strp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F750_0116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strp03400
]
F750_0116
DNA repair and recombination proteins [BR:
strp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F750_0116
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F750_0116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
DnaJ_CXXCXGXG
AAA_16
AAA_21
AAA_29
Anti-TRAP
nSTAND1
AAA_25
AAA_22
AAA_33
NACHT
DUF5351
DUF4350
MeaB
Viral_helicase1
cobW
DUF6510
Pput2613-deam
NTPase_1
DUF463
Motif
Other DBs
NCBI-ProteinID:
AGJ52627
LinkDB
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Position
116868..119339
Genome browser
AA seq
823 aa
AA seq
DB search
MVDKDATDPFVHVRGASENNLRNIDVDVPRDAMVAFTGVSGSGKSSLAFGTLYAEAQRRY
FESVAPYARRLLQQVGAPHVQEVTGLPPAVALQQRRGAPSSRSTVGTITTLSNLLRMLYS
RAGTYPPQAARLEAESFSPNTAAGACPHCHGLGVVHDVAEELLVPDPSLSIREGAIAAWP
GAWQGANLRSVVSGLGVDIDRPWRRLRKKDRDWLLYTDEQPSVFIEPEEDRVDYGYQGKF
WSARKHVMHVLADSKSEKMRERALRFVRSVPCPECHGSGLRPEALAVTFAGRSIAEINAM
PLTEVGALLRPVAGRSEADATTSTARSGETTEVAVRICGDLVARVDVLLDLGLGYLSLGR
RSTTLSPGEAQRLRIATQLRSGLFGVVYVLDEPSAGLHPADAEPLLEVLERLKAAGNSLF
VVEHDMDVVRRADWVVDIGPGAGEGGGRVLYSGPVGGLERVGESATSQYLFGRAEPVDHR
PRTPHGWLHLSGVSRHNLHDVSVDIPLCVLTAVTGVSGSGKSTLVTQVLAEVVRGHLGLV
PEEPDEAQLEVDVQDASGVESFDRMVRVDQRPIGRTPRSNLATYTGMFDAVRKLYAATDE
ARARGYSAGRFSFNVAEGRCDTCQGEGFVAVELLFLPGTYAPCPTCQGARYNAATLEVTY
RGKNIAEVLGLSVDAAATFLSAVPAASRSLETLCEVGLGYLRLGQPATELSGGEAQRIKL
ATELQRARRGHALYLLDEPTAGLHPSDVALLLRQLHRLVDAGNTVVLVEHDLDTIVIADW
VIDLGPGGGEAGGRLVAAGPPAKVARARRSATAPYLAARLAGS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaggacgcgaccgacccgtttgtgcatgtccggggcgccagtgagaacaac
cttcggaacatcgacgtcgacgttccgcgggacgcgatggtcgccttcaccggtgtttcc
ggctccggcaagtcctcgctcgcgttcggcacgctctacgctgaggcccagcggcgctac
ttcgagtccgtagccccttacgcacgcaggctgttgcaacaggtcggtgcaccgcacgtg
caggaagtcaccggactgccaccggcggtggccctgcagcagcgacgcggggcgcccagt
tcgcgctcgacggtcggcaccatcaccacgctgtccaatctgctgcgcatgctgtattcc
cgcgccggaacctatccgccccaggccgcacggctggaggccgagtcgttctcacccaac
accgcggccggcgcctgcccgcactgccatggactgggtgtcgtgcacgacgtcgccgag
gagctgctcgtcccggacccctcgctgagcatccgcgagggggcgatcgccgcctggccg
ggtgcctggcagggcgccaacctgcgcagcgtcgtgagtggcctgggggtcgacatcgac
cggccgtggcgcaggctcaggaagaaggaccgggactggctgctgtacacggacgagcag
ccctccgtgttcatcgagccggaggaggaccgcgtcgactacggctaccagggcaagttc
tggagcgcccgtaagcacgtcatgcacgtccttgccgactccaagagcgagaagatgcgc
gaacgggcgctccggttcgtcaggagtgtgccctgcccggagtgccatggcagcggattg
cggcccgaggcgctcgccgtgaccttcgccgggcgttccatcgccgagatcaacgcgatg
ccgctcaccgaggtcggggcgctgctacggcccgtcgcggggcggtccgaggccgacgcc
accacgtcgaccgcgcgatccggtgagacgaccgaggtcgcggtccggatctgcggcgat
ctggtcgcgcgggtcgatgtactgctcgacctgggtctcggatatctcagtctcgggcgc
cgctcgacgaccctgtcgccgggcgaggcgcagcgtctgcggatcgccacgcagttgcgc
tcggggctgttcggcgtcgtctacgtcctcgacgaaccctctgcgggcctgcatccggct
gacgcggaaccgcttctggaggtgctggagcgcctcaaggcggcgggcaactcgctgttc
gtcgtggagcacgacatggacgtggtgcggcgggcggactgggtggtcgacatcggccct
ggcgcgggcgagggcggcgggcgcgtgctctacagcggcccggtcggcggtctggagcgg
gtgggcgagtcggctacgagccagtacctgttcgggcgcgccgagccggtcgatcaccgg
ccgcgcactccgcacggttggctgcacctgagcggggtctcccgccacaatctccacgac
gtgtccgtcgacataccgctctgcgtgctgacggcggtgacgggcgtgtccggttccgga
aagtcgacgctggtgacgcaggtgctcgcggaggtcgtccgcggccacctcggactcgta
cccgaggagcctgacgaggcgcagttggaggtcgacgtccaggacgcgtcgggggtcgag
tcgttcgaccggatggtccgggtcgaccaacggcccatcggccgaacccctcggtccaac
ttggccacgtacacggggatgttcgatgcggtgcgcaagctgtacgcggcgacggacgag
gccagggcgcgcggctactccgccgggcggttctccttcaacgtggccgaagggcggtgc
gacacctgccagggcgaaggattcgtcgcggtggaactgctcttcctgcctggtacctac
gcaccgtgcccgacctgccagggcgcccggtacaacgccgcaacgctggaagtgacctac
cgcggcaagaacatcgcggaagtgctggggctgtccgtcgacgccgccgctacgttcctg
tccgccgtaccggccgcctcccgcagtctggagacgttgtgtgaggtgggactggggtac
ctgcgtctggggcagcccgcgacggagctcagcggcggtgaggcgcagcgcatcaaactg
gccaccgaactgcagcgagcccgccgcggccacgcgctctacctgctcgacgagccgacg
gcggggctgcacccctcggacgtcgcactgctgctgcgacagttgcaccgcctcgtcgac
gccggcaacacggtcgtcctcgtcgagcacgatctggacaccatcgtcatcgccgactgg
gtcatcgacctcgggccgggcggcggcgaggcgggcgggcggttggtcgcggcggggccc
ccggccaaggtggcgagagcccgtcggagcgccaccgctccctacctcgcggcccggctc
gcgggctcctga
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