Streptomonospora litoralis: EKD16_21060
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Entry
EKD16_21060 CDS
T05863
Name
(GenBank) hypothetical protein
Organism
strr
Streptomonospora litoralis
Brite
Glycosaminoglycan binding proteins [BR:
strr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
EKD16_21060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4190
Motif
Other DBs
NCBI-ProteinID:
QBI55971
UniProt:
A0A4P6Q8V5
LinkDB
All DBs
Position
complement(4873711..4877421)
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AA seq
1236 aa
AA seq
DB search
MTDNGGQRYVPPDGDHGSGEHAGSSWFTPSGDRHRTQSAYQDTYNEADAAEGGDAGRYGT
PDEQPGEQKRAPAREGPPFPQRPHEQQGPESGRPPHEGERPRSTFPDSGGYPGLRAERPG
MAEPYPSALGDLGPPAEPRSAGPPASPGGQQPASPGRPYAALGDTEDTGEHGRGPTGGVS
AAGPGDPLTGHPADQGDARSAAGDPARSAPADHDGSAGTTAADTDRSGDGSIVAGYRLPG
TPASGKDPLNGAAGTGYPDPHADAGAARGAGSTAAEPSSTAGPPTADHGSRPWARSPQDA
ADPLRTAGEGAGPDTQPFRAGPEPGADTDRFDDQGYSASGAAAAPAGGAARWDDRYSDSD
ASGARGTADGRRDAFDGYPAPPAGDARDGAYPGAADEPQRPGTAVPDDPYPGPTTAHAPG
SDPSRPAGGTWRESPQPWSAGLSADDPRRNGSEAASWRESAFGAADTGASPNERGAPDLS
AYADDRAPGASSVESWRDARGGAGAWSDSGRDTDPGFGSSEAASDTARFPGHGDFRGPDG
PLGESDGGAAAASGDRAFGGAGEPADFPGSGGFRDQGESAANRWREPYGGAAPRDASASG
DLSAHTDMRGHGDRFEGERWEPSGEDDRQPADPAYWYGAGAVGEPERYGSGAGYRLDAEP
GLPSYGESASYGDGASSEWSDARRYPGAGSSERTGADPAAGAYGYDDGYDDELSRPYSHR
IQADGDPAARSESPSASPSFGDTDPSAPDERVGDTGAGEGLGTGSGNTWAFSRDDSRLPE
SVREAVAEAHRKRRDGSPDHTTRMFGGGGPGSEPGADSGDPRDRAPAAGLGDDPLAAIAE
QQARARSAEEAGGESAEREERPGAEAGSGAPAGTQQMPAVSDELGWDLRGGESAYPGEAT
RDRRGAGDAYDPYAQRGHYDHYDRFGPDDDSGASATYAEYGSHAGHGRYGGEPVGAQDAD
AGYGGTAEPEYSIGGSHAGYDSGRAQAEGAYGAAESQSPAGEWARSERPAEGYSEHTDRR
GAEPPRPDGFGGDPGSAYAGLSASGAAAGQPYSAHASAGSDTAAMSLRDLEAAGDDAARY
RAAEAEEYGAEPYGADPYQGAPDALSEPPVGPDGRRGRSSRERDPIREDFPGFDRPLGGD
AGDAYPGYDNIDHWPDTAPEASATLWLGIAALIPVIGLFTAVAALITGPRARRAVQRSQG
ELEGLNLVRLGTILAWVGIGLFIVEIAGYLGAFVLA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacaacgggggacagcggtacgtgccgcccgacggtgaccacggctccggcgag
cacgccggaagctcctggttcacacccagcggcgaccgccaccggacgcagtctgcgtat
caggacacctacaacgaggccgacgccgccgaggggggcgacgcgggccgctacggcaca
cccgacgaacaaccgggcgagcagaagcgcgctccggcccgcgagggcccgccgtttccg
cagcgcccgcacgagcagcaagggcccgaatccgggcgaccgccgcacgagggcgagcgg
ccgcggtcgaccttccccgacagcggcggctacccgggcctgcgtgccgagcgtccgggc
atggccgagccctacccgtcggcgctcggcgacctcggaccgccggccgaaccgcgcagt
gcgggcccgccggcgtcccccggcgggcagcagccggcgtcgcccggccgcccctatgcg
gctctcggcgacacagaggacaccggcgaacacggccgcggcccgacgggcggtgtgtcc
gcggcgggtcccggggatcccctcaccgggcatcccgccgaccagggggacgcccggtcc
gcggccggcgacccggcgcgctccgcgccggcggaccacgacgggtcggccggtaccaca
gcggcggacaccgatcgcagcggcgacggcagtatcgtggccggctaccggctgcccggg
accccggcatccgggaaagacccgctgaacggcgccgcgggcaccggctaccccgacccg
cacgccgacgcgggtgccgcgcgcggcgcaggctccacggcagcggaaccctcctctacc
gcggggccccccacggccgaccacgggtcgcggccctgggcccggagcccgcaggacgcg
gccgatcccctccggaccgccggcgaaggcgccggccccgatactcagcccttccgggcc
gggccggaacccggtgcggacaccgaccggttcgacgaccagggctactccgcgtcgggt
gccgcggcagcgcccgcaggcggcgccgctcggtgggacgaccgctactccgactccgac
gcctccggtgcacgcgggacggccgacgggcgccgcgacgccttcgacggctatccggcc
cctcccgccggcgacgcaagggacggcgcctaccccggggcggccgacgagccgcagcgg
cccggtaccgccgtgccggacgacccctatcccggccctacgaccgcacacgcacccggt
tcggacccgtcccgaccggcgggcggtacctggcgcgagtccccgcagccctggagtgcc
ggactctccgccgacgatccccggcggaacggatccgaggccgcctcctggcgggagtcc
gccttcggggccgcggacaccggtgcgtcgccgaatgagcgcggtgctcccgacctctcc
gcctatgccgacgaccgcgcccccggtgcgtcgtccgtggagtcgtggcgggatgcccgc
ggaggggccggggcgtggtcggattccgggcgcgataccgatcccgggttcggttcgtcc
gaggctgcgagcgataccgcgcggttcccggggcacggcgacttccgcggccccgatggg
ccgttgggcgagtccgacggcggggccgcggcggcatcgggcgaccgcgcgttcggcggc
gcgggggagccggcggacttccccggttccggcggcttccgcgaccaaggggagtctgcc
gcgaaccggtggcgggaaccctacggcggtgcggcgccccgcgacgcctccgcctccggc
gacctctccgcgcacaccgacatgcgtggccacggcgaccgcttcgagggggagcggtgg
gagccgtccggcgaggacgaccggcaaccggcggaccccgcctattggtacggtgccggt
gccgtcggcgagcccgagcgctacggatccggggccggctaccgcctggatgccgaaccc
ggcctcccgtcctacggggagtccgcctcctatggggacggcgcttcgagcgagtggtcc
gacgcgcggcgctaccccggcgccgggtcctcggagcgcaccggtgccgaccccgcggcc
ggcgcttacggctacgacgacggctatgacgacgagctttcgcgtccctactcccaccgc
atccaggcggacggcgacccggccgcccgatcggagtcaccgtcggcttcgccctccttc
ggcgacacggacccttccgcccccgatgagcgtgtcggcgacaccggggcgggcgagggc
ctgggtaccggaagcggcaacacctgggccttcagccgcgacgactcccggctcccggaa
agcgtgcgcgaggcggtcgccgaggcgcaccgcaagcggcgtgacggttcgcccgaccac
accacccggatgttcggtggcggcgggcccggatccgagcccggcgccgactccggcgat
ccgcgggatcgtgctccggccgccggcctcggcgacgacccgctcgccgcgatcgccgag
cagcaggcgcgcgcccgctccgccgaggaggccgggggtgagagtgccgagcgcgaggag
cggcctggtgccgaggccggttcgggcgctccggcgggtacgcagcagatgcccgcggtc
tccgacgagctcggatgggacctgcgaggcggtgagtccgcctaccccggcgaggccacg
cgggaccgccgcggagcgggcgacgcctacgacccctacgcgcagcgcggccactacgac
cactacgaccggttcggcccggacgacgactccggggcgtccgcaacgtatgcggagtac
gggagccacgcgggccacgggcgctacggcggcgagcccgtcggcgcgcaggacgcagac
gccggatacggcggcaccgcggagcccgagtactccatcggcggttcccacgcgggctac
gactccggccgggcacaggccgagggcgcctacggggccgccgagtcgcagagcccggcg
ggcgagtgggcgcgttcggaacggcccgccgagggctattccgagcacaccgaccgccgc
ggcgcggaaccgcctcgcccggacgggttcggcggcgatcccggctccgcctacgccgga
ctgtcggcgtcgggggcggctgccgggcaaccgtactccgcccatgcctccgcgggctcc
gacacagcggcgatgagcctccgggacttggaggccgccggcgacgatgccgcccggtac
cgcgccgccgaggccgaggagtacggcgccgagccctacggggccgacccctaccagggc
gctcccgatgccctttcggagccgccggtcggcccggacggccggcgcggccggtcgtcg
cgggagcgcgaccccataagggaggacttccccggcttcgaccgccccctcggcggcgac
gccggcgacgcctatcccggttacgacaacatcgaccactggccggacaccgcccccgag
gcctcggccaccctgtggttgggaatcgccgcgctgatcccggtcatcggcctgttcacc
gccgtcgcggcgctgataacgggcccccgggcgcggcgggccgtccagcgttcgcagggc
gagctggaagggctcaacctggtccggttgggcacgatcctggcctgggtcggtatcgga
ctgttcatcgtggagatcgcgggctatctgggcgcgttcgtgctcgcctga
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