Streptococcus salivarius NCTC 8618: SSAL8618_07995
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Entry
SSAL8618_07995 CDS
T03511
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
strs
Streptococcus salivarius NCTC 8618
Pathway
strs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSAL8618_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strs03019
]
SSAL8618_07995
03009 Ribosome biogenesis [BR:
strs03009
]
SSAL8618_07995
Enzymes [BR:
strs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SSAL8618_07995
Messenger RNA biogenesis [BR:
strs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSAL8618_07995
Ribosome biogenesis [BR:
strs03009
]
Prokaryotic type
rRNA helicases
SSAL8618_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIY21655
UniProt:
A0A0A1E1J4
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All DBs
Position
complement(1751855..1753441)
Genome browser
AA seq
528 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEKPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVAPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQAKKKVALKKIERDFADEAIRSNFDKFKGDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKKNSRDFENRGNKRPHRTSSEKKNGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaaaaaccatcacctatccaagagttgacgattccactcgctcttgaaggtaaggat
gttatcggtcaggcccaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcgtacagaagaaaatacaatccaagctcttgttattgctccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggtcgtgacaaaggcgttaaagtt
cgctcagtctacggtggttctagcattgaaaaacaaatcaaggccctccgttcaggtgcc
cacattgttgtagggacaccaggtcgtctccttgaccttatcaaacgtaaggctcttaaa
ctcaataacattgagactttgattttggatgaagcggatgaaatgcttaacatgggcttc
cttgaagatattgaagctatcattagccgagtaccagaagaacgtcaaactctccttttc
tcagcaactatgcctgatgctatcaaacgtattggtgtgcagttcatgaaagatcctgag
catgtgaaaatcaaggctaaagaattgaccaatgttaacgttgaccaatactttatccga
gtgaaggaacaagagaagtttgataccatgactcgccttatggacgttgaccaaccagaa
ttgtcaattgtctttggtcgtaccaaacgtcgtgtggatgagttgacacgtggcttgaaa
cttcgtggtttccgtgcagaaggtatccatggtgaccttgatcaaaacaaacgtcttcgt
gttatccgtgacttcaagaacgaccaaatcgatatcttggttgcgacagacgttgcagcg
cgtggtcttgacatttcaggtgtcactcacgtctacaactatgatattccacaagatcca
gaaagctacgttcaccgtattggacgtacaggacgtgcaggccaatcaggtcaatctatt
actttcgtagctccaaacgaaatgggttacttgggaatcatcgaaaacttgactaagaaa
cgcatgaaaggtcttaagccaccaacagctcaagaagccttccaagctaagaagaaagtt
gcccttaagaagatcgaacgcgactttgcggatgaagctatccgttctaactttgacaag
ttcaaaggtgatgcggttaaattggctcaagaattcactcctgaagaattggcactttac
atcttgagcttgaccgttcaagacccagagacaatgccagaagtggaaattgcccgtgaa
aaaccattgccattcaaaccatcaggtggtggctttggtggtaaaggcggcaaaggtggc
cgtggcaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgc
gatgaccgagacggtggccgtcgtgacttcaaacgcaagtctaagaagaatagccgtgac
ttcgaaaaccgtggcaacaaacgcccacaccgtacctcaagcgaaaagaaaaacggcttt
gttatccgtaacaagggtgataaatag
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