Salmo trutta (river trout): 115154766
Help
Entry
115154766 CDS
T08542
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115154766 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115154766 (smarcd3)
03036 Chromosome and associated proteins [BR:
stru03036
]
115154766 (smarcd3)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115154766 (smarcd3)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115154766 (smarcd3)
PBAF complex
115154766 (smarcd3)
GBAF(ncBAF) complex
115154766 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115154766
NCBI-ProteinID:
XP_029557194
Ensembl:
ENSSTUG00000015259
LinkDB
All DBs
Position
2:37257646..37319252
Genome browser
AA seq
553 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYSGSPTVRPGL
PTPVMEPSRKRPAPSQQNQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDK
YFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLK
SQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQLKIQRDFML
SFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQR
RQELEQALAVRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagctaggatgccccaccagggt
gcccccatgggcccccccggccccccgtacagtgggagccctacggtgcggcccggcctg
cccaccccggtcatggagcccagccgcaagagacctgccccctcccagcagaaccagcag
cagcagaacgtacagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgagctggtccct
gagtcacaggcctacatggacctgctggccttcgaacgtaaactggaccagaccatcatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcccgacgctgacgactcggatggc
agtattgcatcatgggagctgcgggttgaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctctttcttcaagagcctggtgattgagctggacaaagacctatac
ggtcctgacaaccaccttgtagagctgctgaccagtaaagcgaagcgattcagccttcca
aaagacaacatactcaaagggtcgagagcaaggctgctcgttgaaagttggcaccgcact
cccaccacccaggagacggacggcttccaggtgaagcggccaggggacgtgagcgtgcgc
tgcacactgctgctaatgctggactaccagccgccccagtttaaactggaccctcgtctg
gctcggctgctgggtatccacacccagacccgctcctgtatcatccaggccctgtggcag
tatgtcaagaccaacaagctacaggactcccatgacaaggagtacatcaactgtgacaag
tactttcagcagatctttgactgcccaaggctcaagttctcggagatcccccagcgtctc
accaacctcctcctgccccctgaccccattgtcatcaaccacgtcatcagtgtggaccct
aacgaccagaagaagacggcatgctatgacattgatgtggaggtggaggaccccctgaag
agccagatgagcagcttcctgctctccaccgccaaccagcaggagatcgcctcattggac
aacaaggtgggacaaccacacaggaaggatagccaatcacaattacccaagatgacctta
aagatccatgagaccattgagtccatcaaccagttgaagatccagagggactttatgctc
agcttctccagggatcctaagggctacatccaggactggctcaagtcccaaagcagagac
ctgaagctgatgacagacgtggtggggaacccagaggaggagaggagggcggcgttttac
cacgagccctggtcccaggaggctgtcagtcgctacttctactgcaagatccagcagagg
agacaggagctggagcaggccttggccgtgaggaacacctaa
DBGET
integrated database retrieval system
