Salmo trutta (river trout): 115166095
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Entry
115166095 CDS
T08542
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00310
Lysine degradation
stru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115166095 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115166095 (prdm16)
03036 Chromosome and associated proteins [BR:
stru03036
]
115166095 (prdm16)
Enzymes [BR:
stru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
115166095 (prdm16)
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115166095 (prdm16)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115166095 (prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
SET
zf-BED
Motif
Other DBs
NCBI-GeneID:
115166095
NCBI-ProteinID:
XP_029575629
Ensembl:
ENSSTUG00000014475
LinkDB
All DBs
Position
28:34953983..35183082
Genome browser
AA seq
1423 aa
AA seq
DB search
MRSKARARKLAKNDSETVDSMYETDPHLLVGGAESGEEETEDSIMSPIPVGPPSPHPNNH
HHHSHHGRHHHHNEDPFTPKEGSPYEVPVYIPDDIPIPSDLELRESSVPGAGLGIWAKTR
IGMGECFGPHSALQSATVKDGSFGWEQMLNDRETASSPESCIKKVVDEMGNVKFCLDEGS
EAGGSWLKYVRTAPSFEEQNLAACHLSGDQIYYKAIRDIGVGEELLVYMKDGLFPEGSMA
PNLEDEQMYRCEDCDELFTSALELRRHQKYSCASAGSLFDTLSNEDFKQERDDSDHEPVH
ECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECEN
CDKVQHTRHVFTDPSNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSVKPFI
CPCGLCVSPGEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCE
GKNHYGPAGGLFAPGIPMSSSPILAKSKHHHPHHHPGLNHSGLAFPDYFPSRPHPHPHAG
LPFSPGPHGFPSLSHGFPGLFPPSLYPRPPLLPPSPMLKSPLGNNSNNGGIQEGKLPRSP
LDGPPLSLVSSINNNNGGGSLLSSQEREDKDRLAYGEAKAKAKMSEMSDGSDLEDVNTTS
GTDLDTTTGTASGSDLDSDAESEREQRERSTGAKRRKAAGTGGARGAERAGLDGRPDDVS
SGSVSAVSSLSNLACERPSFLSGASQHSFFPPPEEQALPPTTTGGAAATDSIKAIASIAE
KYFGPGLMGLQEKKIGSLPYHSMFPFQFLPNFPHSLYPFAERAGTLNPGMFFKAEPKSPR
EQHPTPHKMAAPGTGESSPFDLTTKPKEAKPAPPAPAKPTPPSGSSNAPLILPGGEEQPL
DLSIGSRRRDGHNGMVAPEQPPSRKNHRKEEHPGSHPHSHVQHPQGHSLLQPPLPQQQQP
LAQPPQQQPSLHYAKPSPFFMDPIYSRVEKRKLLDPVGALKEKYLRPSPLLFHPQLQYLY
RGTPSLPQMSAMENMTEKLESFSALKLDAPPNSLQHSAHPLFNFRSPPPSLSDAILRKGK
ERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPF
KCHLCNRCFGQQTNLDRHLKKHEHESIPVSQHSGILSNLGNNVSSPNSEPDNHALLDEKE
DSYFSEIRNFISNSELNQASSSTDKRSEVAEEERPSSHSLSNSKMAARGLEEEEEEAEGD
DEEEEEGSLTEKSQDEVPESPSPVTMVTPEAYEDEEEEEAEEEEEATPLAMSYEHTRRCI
EEDGGLLDLESLPSFPKGLELHKASSSEEPPFDVKDIFNTASLESEALKETLYRQAKTQA
YAMMLSLSENNPLHASSQNSLDAWLSMGGGPSETSSFHPLNHI
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgaaacagtggacagc
atgtacgagacagacccccacctcctggtgggaggggccgagagtggcgaggaggagaca
gaggacagcatcatgtcccccatccctgtaggacccccgtccccgcaccccaacaaccac
catcaccacagccaccacgggcgccaccatcaccacaacgaggaccccttcacgcccaag
gaaggctcgccctatgaggtgcccgtctacattcccgatgacattcccatccccagtgac
ctggagctgcgcgagtcctcggtccccggagcgggcctggggatatgggccaaaacccgg
atcgggatgggagagtgcttcggacctcacagcgcactgcagagtgccacggtcaaagac
ggctccttcggatgggagcagatgctgaatgaccgcgagacggcatcctctccggagagc
tgcatcaaaaaggtggtggatgagatgggaaacgtcaagttctgcctggacgaaggctcg
gaggctggcgggagctggctcaagtacgtacgcaccgccccctccttcgaggagcagaac
ctggcggcgtgtcacctcagtggagaccagatttattataaagctattagggatattgga
gtgggggaggagctactggtgtatatgaaggacggacttttcccggagggatcgatggca
ccgaacctagaagacgagcagatgtaccgctgcgaggactgtgacgagctgttcacctcg
gccctggagctgcggcggcaccagaagtactcatgcgccagcgccggctccctgttcgac
acgctcagcaacgaggacttcaagcaggagcgcgacgacagcgaccacgagcccgtccat
gagtgcaaggattgcgagaagatcttccccaacgagtacagtctgggccagcacatgatc
gtgcacacagaggagcgggagtataagtgtgaccagtgtcccaaggccttcaactggaag
tccaacctcatccgtcaccagatgtcccacgacagcggaaagcggttcgagtgtgaaaac
tgcgataaggtacagcacacccggcacgtgtttacggaccccagcaacctgcagcgccac
atccgctcacagcacgtaggagcgcgcgctcacacctgccccgagtgtggcaagaccttc
gccacctcctcgggcctcaagcagcacaagcacattcacagcagtgtcaagcccttcatc
tgcccatgtgggctgtgtgtctccccaggcgaggtatgccacaagtcctacacgcagttc
tccaacctgtgccgccacaagcgcatgcacgccgactgccgcacccagatcaagtgtaag
gactgtggccagatgttcagcactacctcctccctcaacaagcaccggcgcttctgtgag
ggcaagaaccattacggccctgctgggggacttttcgctcccggcatccccatgagcagc
agccccatcctggccaagtccaagcaccaccacccccaccaccacccgggcctcaaccac
tcgggcctggccttccccgactacttcccctcccggccacaccctcacccccatgccggc
cttcccttctcccctgggccgcatggtttcccctcgctctcccacggcttcccgggcctt
ttccccccctcgctctacccccggccgcccttactgcctcccagcccgatgctgaagagc
cccctgggcaacaacagtaacaacggtgggattcaggagggcaagctgccccgcagcccc
ctggacgggcctccactgtctctggtcagctccattaacaacaacaatggaggcggtagt
ctcctcagcagccaggagagggaggacaaggataggctggcgtacggcgaggccaaggcc
aaggccaagatgtcggagatgtcggacggcagcgacctggaggacgtcaacaccaccagc
ggcaccgacctggacaccaccaccggcaccgcctcgggttcagacttagacagcgacgca
gagagcgagcgggaacaacgggagcggagcaccggcgccaagaggaggaaggctgcgggc
actggaggggcgaggggggcggagagggcgggtctggacgggcggccggacgacgtgagt
agtggctcggtgtcggcggtttccagcttgagcaacctggcctgcgagcggccctccttc
ctctccggcgcctcccagcactccttcttccctcctccggaggagcaggcgctgccaccc
accaccacagggggcgccgctgccactgactccatcaaggccatcgcctccatcgcagag
aagtactttggccctggcctcatgggcctgcaggagaagaagatcggctcgctgccctac
cattccatgttccctttccagttcttacccaacttccctcactccctctaccctttcgca
gagcgggccggcaccctcaaccccggcatgttcttcaaggctgagcccaagtcgccacgt
gagcaacatccgacaccccacaaaatggccgccccgggcaccggagagtcatcgcccttc
gacctcaccaccaagcctaaggaggccaagccggccccaccggcccccgccaagccgacc
ccacccagcggtagcagcaacgcccccctcattctccccgggggtgaggagcagccgctg
gacctgagcatcggcagccgccgacgggacggacacaacgggatggtggcccccgagcag
ccgcccagccgcaagaaccaccgcaaggaggagcaccccggcagccacccgcactcccac
gtccagcacccccagggccactccctcctccagcccccgctaccccagcaacagcagccc
ctggctcagccgccccagcaacagccctccctgcactatgccaagccctcacccttcttc
atggacccaatatacagcagggtggaaaagaggaagttactggaccctgtgggagctctg
aaggagaagtacctgaggcccagcccactgctctttcatccacagctacagtatctttac
cgtggtacaccttctttacctcagatgtcggccatggagaacatgacggagaagctggag
agcttcagcgctctcaaactggatgccccgcccaactcactgcagcactccgcccacccg
ctcttcaacttccgctcgccgccgccctccctctccgacgccatcctccgaaaaggcaag
gagcgctacacctgcaggtactgtgggaagatcttccccaggtcagctaatcttaccagg
cacttacggacacatacaggagagcagccctacaggtgtaaatactgtgaccgttcgttc
agcatctcctccaacctccagcggcatgtgcgtaacatccacaacaaggagaagcccttc
aagtgtcacctgtgcaaccgctgcttcggccagcagaccaacctggaccgtcacctcaag
aagcacgagcatgagagcatccccgtgagtcaacactctgggatcctctccaacctagga
aacaacgtttcctctcccaactccgagccagacaatcatgcacttttagatgagaaggag
gactcgtacttctccgaaatccgcaacttcatttccaacagcgagctgaaccaggcatcc
agctccacagacaagaggtcagaggttgcggaagaggagcgtccatctagccacagcctg
tccaactccaagatggcagcccgggggctggaggaagaggaggaggaggcggagggagat
gacgaagaggaggaggaaggcagcctgacagagaagtctcaggacgaggtgcctgagtcc
ccctccccggtcactatggttacgccggaggcgtacgaggacgaagaagaggaggaggcg
gaagaagaggaggaggccacaccgctagccatgagctacgaacacacccgcaggtgtata
gaggaggacggcgggctgttagacctggagtccctgcccagcttccccaagggcctggag
ctgcataaggccagcagcagcgaggagcccccctttgatgttaaagacatttttaacacc
gcctcgctcgagtctgaggccctgaaagagactctgtacaggcaggctaaaacccaggct
tatgcaatgatgctgtctctgtcggagaacaaccctttgcacgcgtcctcccagaactca
ctggatgcctggctgagcatgggaggaggcccgtccgagacgagcagctttcacccactc
aaccacatctag
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integrated database retrieval system
