Salmo trutta (river trout): 115172187
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Entry
115172187 CDS
T08542
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115172187 (wdhd1)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
115172187 (wdhd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
Ctf4_C
WD40
ANAPC4_WD40
HMG_box
eIF2A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
115172187
NCBI-ProteinID:
XP_029585203
Ensembl:
ENSSTUG00000020685
LinkDB
All DBs
Position
33:548810..603092
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AA seq
1133 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDDTGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSL
ALKNGKLVTAASNNTVQIHTFPEGDPDGILTRFTTNATHVTYNSSGSRVAAGSSDFMVKV
VEMSDSSQQKTLRGHSAPVLSVTFDPKDEFLASASCDGSVAVWKIEEQTQVTSWPLLQKS
NDVINAKSLCRLAWQPKAAKLLAVPVETTVQLYQRDSWAHVSTLSDDLGTQAINVVAWSP
CGKFLAAGSIGGLLTVWDVESKLCVERQTHEKGYTVCGLAWHPSGGQIAYTDTEGCLGVL
DGLSSSSSSSSTAAAKSTKQAPASYDDLFDDDDDDRPMDEGIGEGTRSPAKNPGDEDDDD
DLMPATGRARNRSAFLDDENSLDTGSLKQGLDKFVDDDDAGSAIVPPAAVAAPLRPVYDG
PMPTPPQKAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAVHHAMHLTN
SLGHTVADLSQEAVLLACPGTDELASKLQCLHFSSWDTNKEWMVDLPKGEDVRALCLGQG
WAAAATSALMLRLFSIGGVQRELFSLPGPVVCMAGHGEQLLIVYHRGTGFDGEQALGVQL
LQFGHKRRQVIHGEPLPLSRKSHLSWLGFTAEGTPCFIDSEGVVRLLNRSLGNMWTPVCN
TRDNCKGKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAVLPFKLPLCQTTTEKG
QMEEQYWRSVLLHNHYGFLSSSGYEIDEEGQSQAQKEQQELLMKMFALSCKLEREFRCVE
LAELMTQNVVTLAIRYASRSRRMALAQRLSDLALEKANQLQGEEPQDEEEEEPLQYTRRN
TGYDQSSSEMGADRQHSSHRQAQEEEVDEEEGQDEHMDEGDVAESKRQGLNPFAKGTAAS
PEKPSPKPVSKEGRVNPFKVSSGLGRPGLAGGQHRVTNVLDSMMSSSRKPTALLSSSGST
GKLNKTPVLKPLAPRPKTKTQSTLLHMNAPKAANKKAAEERELAVCSLKQTEAPPPASPA
ENVENKKPKTGFQLWLEENRRIILADNPDLEETDVIKEAMGRFRTLSADDRLSWTERAKG
QSGDVADMKKRKRGEEESRGDENGQSDADETSAKKKKPLDTSAKLSAFAFNKN
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgaaagaaagccaatgcgctacggccactcggagggacacacagatgtttgc
ttcgatgacactggaaagtatatagtcacttgtggaagtgatggggatgtgagaatatgg
gagagtctggatgacgacgatcccaagtccatcaacgtgggggagaaggcctattcttta
gccttgaagaatgggaagctggtcacagcagcctccaacaacacagtacaaatccacacg
ttccctgagggtgacccagatggcatcctcacccgctttaccaccaacgccacccacgtc
acctacaacagcagcggctccagagtcgctgccggatccagtgacttcatggtgaaggta
gtggagatgtccgacagcagtcagcagaagaccctgcggggacacagtgcccccgtcctc
agtgtcacctttgaccccaaggatgagttcctggcctctgctagctgtgatggatctgta
gctgtgtggaagattgaggaacagactcaggtgaccagctggccgctgctgcagaagtcc
aatgatgtcatcaatgccaagtccctgtgccgactggcctggcagcccaaggccgctaag
ctcctggctgttcccgtggagacaacggtgcagctgtaccagagagactcctgggcccac
gtgagcacactctccgatgaccttggcacacaggcaataaacgttgtggcatggtcgccc
tgtgggaagttcttggctgcagggagcatcgggggtttgctaacggtctgggacgtggag
agcaagctgtgtgtggaaaggcagactcatgagaagggctacactgtgtgtggactagct
tggcatccctcgggtggtcaaatagcctacaccgacacagagggctgtcttggcgtgctg
gatgggctctcttcttcatcctcttcttcctccactgcggctgcaaagagtaccaagcag
gctccagccagctacgacgaccttttcgacgacgatgacgacgacagacccatggacgag
ggtatcggcgagggcacccgttcacctgccaagaaccccggggacgaggacgatgacgac
gacctcatgcctgcgacagggcgagcacggaacaggagtgccttcctcgacgacgagaac
tcactagacacaggctcgctcaaacaggggctggataagtttgttgatgatgatgatgcg
ggcagcgccatagtgccccccgctgccgtggctgctcccctccggcccgtctatgacggg
ccaatgcccaccccaccacagaaggccttccagccaggctccaccccggcacacctcatg
caccgcttcatgatgtggaactcggtgggaatcgtgcgcggctacaatgacgaccaggac
aacgccattgatgtggagttccacgacacagctgtgcaccatgccatgcatctcaccaac
tccctgggccacaccgttgcagacctctcccaggaggccgtgctgcttgcctgccccggc
accgacgagctcgccagtaagctccagtgccttcacttctcatcgtgggacaccaacaag
gagtggatggtggatctgcccaagggggaggacgtgcgggccctatgcctgggccagggc
tgggcggcggctgccaccagtgccctcatgctgcggctcttctccatcggaggggtgcag
agggagctgttcagcctgcccggacccgtggtctgcatggctgggcacggggagcaactg
ctcatcgtctaccaccgaggcacagggtttgacggagaacaggccctaggggtccagctg
ctgcagtttggacacaaaagacggcaggttatccacggggagcccctccccctctcccgc
aaatctcacctatcatggttaggcttcacagccgagggaaccccatgcttcatcgactct
gagggcgtggtgcgcctgctaaaccgctccttgggaaacatgtggacacctgtgtgtaac
accagggacaactgcaagggcaagtcagaccactactgggtggtgggagtgcatgagaac
ccccagcagctcaggtgtatcccatgtaaagggtcccggtatccccccacgttgcccagg
cctgctgtggccgtccttcccttcaagctgcctctctgtcagaccactacagagaagggc
cagatggaggagcagtactggcgctcggtgctcctccacaaccactacggcttcctgtcg
tccagcggctacgagatagacgaggaaggccagagccaggcccagaaagaacagcaggag
ctgctcatgaagatgtttgccctgtcgtgtaagctggagagggagttccgctgcgtggag
ctagccgagctgatgacccagaacgtagtgaccctggccatccgctacgcctcgcgatcc
cgccgcatggccctggcccagcgcctcagcgatctggctctggagaaggccaatcagctg
cagggggaggagccccaggatgaggaagaggaggagccactccagtacaccagacggaac
actgggtacgaccagagcagcagtgagatgggtgcggatcgccaacacagcagccacaga
caagcacaggaggaagaggtggatgaagaggagggtcaggatgaacatatggatgaaggg
gatgtagcagagagcaaaagacaaggtctaaatcccttcgctaaagggactgctgcatca
cctgagaaaccttctcccaaacctgtaagcaaagaaggacgtgtgaaccctttcaaggtg
agcagcgggttagggaggccgggtttggcggggggtcagcacagggtgacaaacgtcctg
gacagcatgatgtcgtccagcaggaagcccactgctctactgagcagctccggctccacg
gggaaactgaataaaacacctgtcctcaagcctctggctcccagaccaaagaccaagacc
cagtctacactgctgcacatgaacgctcccaaagcagccaataagaaagcagcggaggag
cgggagctggcagtgtgtagtctgaaacagacagaggcaccgcctccagcctcaccagca
gaaaatgttgagaacaagaagcccaagacgggcttccagctgtggctggaggagaatagg
aggatcatcctggctgacaacccagatctggaggagacggatgtcatcaaggaggccatg
ggccgcttcaggaccctgtctgcagatgaccggctgtcctggacagagcgggcaaaggga
cagtctggagacgtggcggatatgaaaaaacgaaagagaggagaagaagagagcagggga
gacgagaacggacagagtgatgcagacgagaccagtgccaaaaagaaaaagcccttagac
acctcagccaagctctcagcatttgccttcaacaaaaattaa
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