Streptomyces tsukubensis: B7R87_07920
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Entry
B7R87_07920 CDS
T07155
Name
(GenBank) sugar-binding protein
Organism
stsu
Streptomyces tsukubensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ricin_B_lectin
PT-HINT
RHS_repeat
RicinB_lectin_2
AXH
Hom_end_hint
Hint
SpvB
DUF6443
Motif
Other DBs
NCBI-ProteinID:
AZK93813
UniProt:
A0A5H2UG56
LinkDB
All DBs
Position
2109797..2117413
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AA seq
2538 aa
AA seq
DB search
MDLTDIPKPPPVPGVNGGNLENLTTAEIPTEPEFEPKKTAAPAAVPPAARTLTALTPGQT
VQIGTTPLEIGAPQNATPAETTALEGNWQVALADPAQTEARNIEGFAFTVTPPSTAAGKA
VVALDYTEFAELYGANWADRLNILQFPGCFLTTPEVEACSEPVEVDTENVVKPKTGDTAG
DNIIDGERQIEATINVASLTDPVTPPVPAARAMSAKAAAAPMSAVTAASAGASVLVATSS
GSGAKGDFSATPIPSAGSWSAGNGAGAFTYNYAMQTPSVPAGPSPALGFGYNSQAVDGAT
SSTNNQPSWVGDGWDYNPGSITRTYKSCRDDRTGGNNTKKTADLCWGSYNAVLTLGGSTT
ELVLDDSDKATPHSDKWVTANGDGSKVELAKNPDFANGDADNEYWKVTTRDGTQYWFGRN
KLPGWTTGKETTNSAFTVPVSGNQPGEPCYNATYANSFCQQAWRWNLDYVVDVHGNAMSL
WWKQEQNHYAQNFKFKKPVAYDRGGYLSRIDYGQRDNAIYTGDPIARVMFSTEERCYVED
GMQCTDANFASGDWAKNRIWYDTPADLYCSGATGKECYVPVPSFWSRKRLAAVTTYTQRV
QGSTALHKVDNWKLAQSLPHEKTDEGTALWLNSVTRTGYGVNDNEGVQLNPVTFVANTQS
MPNRVKEVVDAGPPEKKDNNPIFDRLRISRVVNEYGGETVVTYKAPTGACQSGKNFPATH
TNTGLCFPAYWHPDPDKADEKISWFNKYVIAKVEELPNVRGVEPTSTTYEYDETDAAKRK
GAGWALNQAEFSKKKTRTYDQWRGYEIVRTISGADSADPYTGSERSMSETRYFRGMDGDK
LPGTGNPVRDVVVKDSQGYDIARDLLPYQGRVAETITYTKVGGLALTRDVDYPWNKVLAS
RARGDGIPDLKAYRVMESYSVTSTMSSGTRTDSDPTTEDDTRVWRTVRTESKHDNTYGLP
YEVESQGDTGITGDETCSRIEYVHNTAKHLIGLSKQSLTTAGPCPTGTAPEPPASAWISG
SRVAYDTLAYGATPTDGLATTTWTVSKDGGSWDKDSEVTYDSLARPVSATDAANNTSTTE
YIPATGQVYSVKTKNAKQHTSTSEVEPGRATALKETDPNGRVTTFEYDGLGRTVKAWGPT
NTAGEPAAKFTYYAKPGDPISVRSELLKEGEGSRYVSSYIFYDGLGRERQKQDAAVGKGR
LITDIFYGPNGTISRTNNGYYSGGDPQPVMYEPTDASDTKIPNATLYKYDALGRILQETP
YEAGVEKPEKANRSQFGYDYSVSIEPTGAASQRTYTDAMGRTVRVDTFTDPARTAFRSTH
FKYDARGDLIEAKDPKGNKWSWTYDVRGRLTSSTDPDAGTSSTEYDTADRPVISMDGRGV
KVWSKYDELSRPVEQRLNSSTGDLLQTSTYDTITGAVGLPASATRYTDNLPYTSEITGYN
ADYQPTGKKLTLPDSIATTHGLQKTYNYTFSYTKGGQLRETMLPAAGALAAEKIITRYNA
DGLPVSTSGKEWYTTDAEYSVYGQVVRTVSGNNPNRVWTTNIFNENTGALEQSLVDRQST
SDTSTVTGTRVNARSYEYDPAGNITSIADRWNAVTDRQCFTYDTIGQLTQAWTAPSTCQA
AGQQGAAPEYPGGTKNVTAANSGYWQSYTYDELGQRTKLVKHDPAGDATKNATTTYSYGK
ADGTQPHTLTGTSTTYKTEAGAQVTKPSVRTYDKSGNMDTRSDGGVGQTLTWTWDGKAEK
ITGFGEGSGAWTGLAGKCLDLAGGLTLAGTAVQLYTCNGSKAQKFRIDATVADPTVGALK
VLGKCVVPGADGIAAVIADCTGAAAQQWTTVATGKKLKHVASGKCLTAPNATVGTDLQLT
ACDTTASEGQSWKPADETRYIYGPGGERLMSITSGETTLFLGDTTVATSSGLHSYTERYY
AQPGAPTVMRHVLGTGTSELSVQITDHQGTAHINVGLSGGSPVKFAKKDPFGVERNESTS
WRSHKGYVGGDDDSSTGLVHLGAREYEPATGRFISSDPMIDIADPVQINGYSYSENNPVT
FADPTGLVSAAQGGGASSNYKGDEHGGPSKGELAWAQAEQNRSMSSVIADAGWSLLKGLI
GYDDMIACFSRGDLWACGRMIIDALPWTKVFSAAKKVWNAVSRIAGAISAFKKAQEKARQ
IIELARKAQEAARKAAEAKKKAAEKAAQLKKKKAEQAKLRAAKKAAQKTGNAVQKTKKAA
AKKAEKPINRARQQAKREDSPSKRSSGGSCKNPNNSFVPGTRVVMADGTTKPIEEVKNGD
KVIATDPKTGETAIETVTAEIKGEGSKNLVEVTIDTDGAKGSATATVTATDGHPFWVPEL
NEWINATDLKSGNWLRTGTGTLVQISAVERWTTRSTVHNLTVSDLSTYYVLAGASSLLVH
NCKDVVLGLADEGNIRKVAKDNDYQHFMDLSRDDALAAVRDVAHEQPTRTIHVVMDGFRL
TNKKKDNSPPTPQELFEDFYREGAGDNWLTTQKEMYHLGESVRRGEREWNTIKFWSNGRD
ITDQLKIPDWAPLRSHVK
NT seq
7617 nt
NT seq
+upstream
nt +downstream
nt
gtggacttgaccgacattcccaagccgcccccggtgccgggggtcaacggcgggaatctc
gaaaacctgacgaccgccgagatcccgaccgagccggagttcgagccgaagaagaccgcg
gccccggccgcggtgccgccggccgcgcggacgctgaccgcgctgacgccggggcagacg
gtgcagatcggcaccaccccgctcgaaatcggagccccgcagaacgccacccccgccgaa
acgaccgctctcgaaggcaactggcaggttgcgctcgcggatccggcgcagaccgaggcg
cggaacatcgagggcttcgccttcaccgtgaccccgccgtcgaccgccgcgggcaaggcc
gtcgtcgcgctggactacaccgagtttgccgagttgtacggcgcgaactgggccgaccgg
ctcaacatcttgcagttcccgggctgcttcctgacgacaccggaggtcgaagcctgctcg
gagccggtcgaggtcgacaccgagaacgtggtgaagcccaagaccggtgacaccgccggt
gacaacatcatcgacggcgagcggcagatcgaagccacgatcaacgtcgcgtccctgacc
gacccggtcactccgccggtcccggccgcccgtgcgatgagcgcgaaggcagcggccgcg
ccgatgtccgccgtaacggcggcctccgccggcgcctcggtgctggtggcgacatcaagc
ggcagcggtgcgaagggcgacttctccgcgaccccgatcccgagcgcgggctcctggtcc
gcgggcaacggcgccggcgccttcacctacaactatgcgatgcagaccccgtcggtgcct
gccgggccgtcgcccgcgctgggcttcggctacaactcgcaggccgtggacggcgccacg
tcgtcgacgaacaaccagccctcgtgggtcggtgacggctgggactacaacccgggttcc
atcacccggacgtacaagtcctgccgtgacgaccgcaccggtggcaacaacaccaagaag
actgcggacctgtgctggggctcgtacaacgcggtcctgaccctgggcgggtcgacgacc
gagctggtgctggacgactccgacaaggccaccccgcactccgacaagtgggtcaccgcc
aacggcgacggctccaaggtcgagctggcgaagaaccccgacttcgcgaacggcgacgcg
gacaacgagtactggaaggtcaccacgcgtgacggcacccagtactggttcggccgcaac
aagctcccgggctggacgacgggcaaggagaccaccaactccgccttcaccgtccccgtc
tccggcaaccagcccggcgaaccctgctacaacgcgacctacgcgaactccttctgccag
caggcctggcgctggaacctcgactacgtcgtcgacgtccacggcaacgccatgtccctg
tggtggaagcaggagcagaaccactacgcccagaacttcaagttcaagaagcccgtcgcc
tacgaccgcggcggctacctgagccgaatcgactacggccagcgcgacaacgcgatctac
accggcgacccgatcgcccgcgtcatgttctccaccgaggagcgctgctacgtcgaggac
gggatgcagtgcaccgacgccaacttcgcctcgggtgactgggcgaagaaccggatctgg
tacgacacccccgccgacctgtactgctcgggtgccacgggcaaggagtgctacgtcccg
gtccccagcttctggtcccgcaagcgcctcgccgcggtcaccacgtacacccagcgggtc
cagggctcgacggccctgcacaaggtggacaactggaagctggcccagtcgctgccgcac
gagaagaccgacgagggcacggccctctggctcaactcggtcacccgcaccggctacggc
gtcaacgacaacgagggtgtccagctcaacccggtcaccttcgtcgccaacacccagtcc
atgccgaaccgggtgaaggaagtcgtcgacgcgggtccgccggagaagaaggacaacaac
ccgatcttcgaccggttgcggatcagccgggtggtcaacgagtacggcggcgagaccgtc
gtcacctacaaggctcccaccggcgcctgccagagcggcaagaacttccccgcgacgcac
acgaacaccggactgtgcttccccgcctactggcatccggacccggacaaggccgacgag
aagatcagctggttcaacaagtacgtcatcgccaaggtcgaggaacttcccaacgtccgt
ggtgtggagccgacgtcgacgacgtacgagtacgacgagaccgacgcggccaagcgcaag
ggcgcgggctgggcactgaaccaggccgagttctcgaagaagaagacccggacgtacgac
cagtggcggggttacgagatcgtccgcacgatctccggcgccgactccgccgacccctac
accggcagtgaacgctccatgtcggagacccgctacttccggggcatggacggcgacaag
ttgcccgggaccgggaacccggtccgtgatgtcgtggtcaaggacagccagggctacgac
atcgcccgcgacctcctcccctaccagggccgggtcgcggagacgatcacgtacaccaag
gtcggcggcctcgcgctgacgcgcgacgtcgactacccgtggaacaaggtccttgcctcc
cgggcccgcggtgacgggatcccggacctcaaggcctaccgggtcatggagagctacagc
gtcacgtcgacgatgtcgtcgggtacccggacggactccgatccgaccaccgaggacgac
actcgcgtctggcggacggtccggaccgagtcgaagcacgacaacacctacggcctgccc
tacgaagtcgaatcccagggcgacaccggcatcacgggtgacgagacgtgctcgcggatc
gagtacgtccacaacaccgccaaacacctgatcggcctctccaagcagtcgttgaccacc
gccgggccctgcccgacgggcaccgcccccgagccgccggcctcggcgtggatctccggc
tcccgggtcgcctacgacaccctcgcctacggcgccaccccgaccgacggcctggccacc
accacgtggacggtcagcaaggacggcggtagctgggacaaggactcggaggtcacctac
gactccctggcccgcccggtcagcgccacggacgcggcgaacaacaccagcacgaccgag
tacatcccggccacggggcaggtctactccgttaaaacgaagaacgccaagcagcacacc
tccaccagcgaggtcgagcccggccgggccaccgcactgaaggagaccgaccccaacggc
cgtgtcaccaccttcgagtacgacggcctcggccgcaccgtgaaggcctggggcccgacc
aacacggccggtgagccggcggcgaagttcacctactacgccaagcccggcgacccgatc
tccgtccgctccgagctgctgaaggagggcgagggctcccggtacgtcagctcgtacatc
ttctacgacggcctgggccgcgaacgccagaagcaggacgcggccgtggggaagggccgt
ctgatcacggacatcttctacggtccgaacggaacgatcagccggacgaacaacggctac
tactccggcggcgacccgcagccggtgatgtacgagccgaccgacgcgtccgacacgaag
atccccaacgccaccctctacaagtacgacgcactcggccgcatcctccaggagacgccg
tacgaggcgggggtcgagaagcccgagaaggcgaaccgttcgcagttcggctacgactac
tcggtcagcatcgaacccaccggcgcggcatcgcagcgcacgtacaccgacgccatgggc
cgcaccgtacgggtggacacgttcaccgacccggcgcggaccgcgttccgctccacccac
ttcaagtacgacgcccgcggcgatctgatcgaagccaaggaccccaagggcaacaagtgg
tcctggacctacgacgtccgaggccggctgacctcctcgaccgatccggacgccggcacc
agcagcaccgagtacgacaccgccgaccgccccgtcatctccatggacgggcggggggtg
aaggtgtggtcgaagtacgacgagctgtcgcgcccggtcgaacagcggctgaacagcagc
acgggcgaccttctccagaccagcacctacgacacgatcaccggcgctgtcggcctcccg
gccagtgccacccgctacaccgacaacctgccctacaccagtgagatcaccggctacaac
gccgactaccagcccaccggtaagaagctgaccctgccggacagcatcgccaccacccac
ggtctgcagaagacctacaactacaccttcagctacaccaagggcgggcaactgcgggag
accatgcttcccgcggcgggcgccttggctgcggagaagatcatcacgcggtacaacgcg
gacggtcttccggtgtccacctccggcaaggagtggtacacgaccgacgccgagtacagc
gtctacggccaggtcgtgcgcacggtcagcgggaacaacccgaaccgggtgtggaccacc
aacatcttcaacgagaacaccggcgccctggagcagagcctcgtcgaccgccagtcgacg
agcgacacctccaccgtgaccgggacgcgggtgaacgcccggtcgtacgagtacgacccg
gcgggcaacatcacgtcgatcgcagaccgctggaacgcggtcaccgaccggcagtgcttc
acctacgacaccatcggccagctcacccaggcctggaccgcccccagcacctgccaggcg
gcaggccagcagggcgcggcgcccgagtacccgggtggcacgaagaatgtcaccgcagcg
aactccgggtactggcagtcgtacacctacgacgagctgggccagcggaccaagctggtc
aagcacgacccggccggtgacgccaccaagaacgccaccaccacttacagctacggaaag
gccgacggcacccagccgcacaccctgaccggcacctccaccacctacaagacggaggcc
ggggcccaggtcaccaagccgtcggtccgcacctatgacaagtccgggaacatggacacc
cggtcggacggcggcgtcggccagaccctgacctggacctgggacggcaaagccgagaag
atcaccggcttcggcgaaggctccggagcctggaccggactggcaggcaagtgcctcgac
ctggccgggggactgaccctggcgggtaccgcggttcagctctacacctgcaacggcagc
aaggcccagaagttccgcatcgacgccaccgtcgcggacccgaccgtgggtgcgctgaag
gtgctgggcaagtgcgtcgtccccggcgccgacgggatcgccgccgtgatcgcggactgc
accggcgccgcggcccagcagtggaccacggtcgccacgggcaagaagctcaagcacgtc
gccagcggaaagtgcctcaccgcaccgaacgccacggtcggcaccgacctccagctcacg
gcctgcgacaccacggccagtgagggccagtcctggaagcccgccgacgagacccgctac
atctacgggcccggcggcgaacgcctgatgtcgatcacctcgggcgagaccacgctcttc
ctgggtgacaccaccgtcgccaccagcagcggactgcactcctacaccgagcgctactac
gcccagcccggcgcacccaccgtgatgcgccacgtcctgggcaccggcaccagcgaactc
tccgtccagatcacggaccaccagggcaccgcccacatcaacgtgggcctgtccggcggc
agcccggtcaaattcgccaagaaggaccccttcggcgtcgaacggaacgagagcaccagc
tggcgctcccacaagggttacgtcggtggagacgacgacagctcgaccgggctcgtccat
ctgggggcacgcgagtacgaaccggccaccggccgcttcatctcgtcggacccgatgatc
gacatcgccgatcccgttcagatcaacggctactcctacagcgagaacaacccggtcacc
tttgccgacccgaccggtctggtttccgcggcccagggcggcggcgccagcagcaactac
aagggcgacgaacacggtggcccgtccaagggcgagctggcctgggcgcaggcggagcag
aaccgctcgatgtccagcgtcatcgcggacgccggctggtccctcctcaagggcctcatc
ggctacgacgacatgatcgcctgcttctcccggggcgacctgtgggcctgcggccgcatg
atcatcgacgccctgccgtggaccaaggtcttcagcgcggccaagaaggtctggaacgcc
gtcagtcgcatcgccggagccatctccgccttcaagaaggcccaggagaaggcccgccag
atcatcgaactcgcccgcaaggcacaagaagcggcaagaaaggcagccgaagccaagaag
aaggcagcggaaaaggcagcacagctgaagaagaagaaagctgagcaagccaaattgaga
gccgcgaagaaggcggctcagaagaccggaaacgccgtacagaaaacgaagaaggccgcg
gcgaagaaggccgagaagccgatcaaccgggccaggcagcaggccaagagggaggactcg
cccagcaagcgctcgtcgggtggcagctgcaagaacccgaacaacagcttcgttcccggc
actcgcgtcgtcatggccgacggaaccaccaagccgatcgaagaggtcaagaacggcgac
aaggtcatcgccaccgaccccaagaccggcgagaccgcaatcgagacggtcactgcggag
atcaagggcgaaggcagcaagaacctcgtcgaggtcaccatcgacaccgacggcgccaag
ggctcggccaccgcgacggtcaccgccaccgacggacacccgttctgggtacccgagctg
aacgagtggatcaacgccaccgatctgaagtcgggcaactggctgcggaccggaaccggg
acgctggtccagatctccgcggtcgagcgctggaccactcggtcaaccgttcacaacctc
accgtcagcgacctcagcacctactacgtgctggcgggagcgtcctcccttctcgtccac
aactgcaaggacgtggtactgggactggcggacgagggcaacattcgcaaggtcgccaag
gacaacgactaccagcacttcatggacctgtcgcgggacgacgcactcgccgcggtacgg
gacgttgcccatgagcagcccacgaggaccatccatgtggtcatggacggcttccgtctg
acgaacaagaagaaggacaattccccgcccacgcctcaggagctgttcgaggacttctat
cgagaaggcgccggcgacaactggctcaccacacaaaaggagatgtaccatctcggggaa
tcagtgagacgcggcgagcgggaatggaataccatcaaattctggagcaacggaagagac
ataacggaccagctcaagattcctgattgggctccactgagatcgcacgtcaagtag
DBGET
integrated database retrieval system
