Schaalia turicensis: G5S47_01820
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Entry
G5S47_01820 CDS
T07393
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stuc
Schaalia turicensis
Pathway
stuc03420
Nucleotide excision repair
stuc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5S47_01820
03430 Mismatch repair
G5S47_01820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stuc03400
]
G5S47_01820
Enzymes [BR:
stuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S47_01820
DNA repair and recombination proteins [BR:
stuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5S47_01820
MMR (mismatch excision repair)
Other MMR factors
G5S47_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
ResIII
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QYB15718
LinkDB
All DBs
Position
425004..428471
Genome browser
AA seq
1155 aa
AA seq
DB search
MTQHVYSAEEIQRLINPKIHPTPEQIKVIESPLHPLLVVAGAGSGKTETMAMRVLWAVAN
EPDITASRVLGLTFTKKAAGELKDRLRSRLKKLSIGIGASEKEKISNDDDSSAKTKMIDP
HEEPTSMTYNAFAGQIVSEHGLRIGLNPDVTMLSQAGSVQLMTDIMTNWPKRLDENITIS
SAVTTALSLNGQLGEHGLSIEQAREQLGQFGAELTEVGDSNEDARKVQARNQLRIALLDP
IAQFQRRKRELGVMDFSDQLILATRIVNTVPDVVQQIRKEYGLVLLDEFQDTSVIQMELL
STLFKDQAVTAVGDPNQAIYGWRGASASSLESFMERFCSEEPKPEQTLTLSTAWRNDRQI
LVCANEVAKPLRSHSHAATSPVLVESTLATEGDVEIAYEADRDAQIAHVVDYVQRLRNTH
RSEWKIGILCRKKSHFLPIDRALREHGIPTQVLGLGGLLEQPVVADLRAALEITNSVDAS
PALLRLLVREDIGASDLRLLGQWASRLNRKSRGTPYEGVLLSAVDSPPEVGWTSTNRQAG
SSQSDSVAESANDAPQESDAQTEALDGPSFSEGGYRRVLRLGERLRKLRSLRGHGLVELA
ERASQIMGILDDAIADPLGSGARESLDAFIDQIAEYESSVDNPTLAGLVEWLNVAESDPA
GLKGVDVQPDPSAVQILTVHGSKGLEWDSVIVFGMSDTIFPSHRSKSVYWRDEPPAQTGW
VMAPEELPHPLRGDYGDLPPFTIDVSNGRTPSAGFSKWLKTVYGPELGAHVEREERRLAY
VAMTRARHTQLLIGSWLDESKTLRNPSRYLMASRHAMIEDFEQTLATGQVVWANGNVDVK
DGNELQELQKRIDGLNDVIPEAPTSESFAQDSEEDTIYFPFEIGPSRQAVAKGAQRVRQA
QAELKTDADVFELLDALGESQRVKDVTALIEEHRLASSKETMVIHQDHIPATSVSKMLED
IDAFALDMRRPMPAQPSDSATLGTIFHAWVERQLHLASAEERDEPVAGIETLDDHERARL
RHMQDNFVELPIVKTGTPIAIEEAFSVKVADISVNGRIDAVFEDKHGKTIIVDWKTGRAP
HRNTKKETLRYYATQLRLYRLAWSQLTGLAEESITPMLAFVDANTTVSLDDLVKLGGAGL
EESLEDEVKRTLKRA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcatgtctatagcgctgaagagatccagcgactgattaaccccaaaatccat
ccgaccccagagcaaattaaagtcatcgaatcacctctacacccgctgctggtcgttgct
ggcgcgggttcgggcaaaacggaaacgatggcaatgcgcgttctctgggcggttgccaac
gaaccggacatcacagcgtcgcgtgttctgggcctgactttcacaaagaaagccgcaggt
gaactgaaagatcgtctacgttcacgattgaagaaactcagcattggcatcggagcttcc
gaaaaggaaaagatcagcaacgatgatgattcttctgcgaaaacaaagatgatcgacccg
catgaagaaccgacatcaatgacctacaacgccttcgcggggcagattgtcagcgaacac
ggtttacggatcggcttgaatcctgacgtcacaatgctcagccaagctggttcggttcag
ctgatgacagacatcatgacgaattggccgaaacgcctcgatgagaacatcacgatttcg
tctgcggtcacgacggcgttgagcctcaacggacagttgggggagcatggactcagcatc
gaacaagctcgcgaacagttgggacaattcggagcggaactcaccgaagtcggcgattct
aacgaagatgcgcgtaaggtgcaggcgcgtaaccagcttcgtatcgccctccttgatccc
attgcccagttccaacgccgtaagcgtgaactcggagtcatggatttttcagaccagctg
atcctggccactcgaatcgtgaataccgtgcccgatgttgttcaacagattcgtaaagaa
tatgggcttgttctgctcgatgaattccaggacacctctgtcatccagatggaactcctg
tcaacgctcttcaaagaccaggcggtgactgccgtcggcgacccgaaccaagcaatctac
ggctggagaggtgcttcggcatcctcgctagaatcattcatggaacgtttctgttctgaa
gaacccaagccggaacagactctgacgctatcaaccgcgtggcgtaacgatcgtcagatc
cttgtatgcgccaacgaagtggcaaaaccgcttcgctcacattcgcatgctgcaacgtct
ccggtcctcgtcgaatctacattggcaactgaaggcgatgttgaaattgcctatgaagct
gatcgcgatgctcagatcgcgcacgttgttgactacgtgcaacgccttcgcaatacccat
cggagtgagtggaagatcggcattctctgtcgcaagaagagccactttcttcccattgac
cgcgcacttcgcgagcatggcattcccacccaagttctcgggctcggcggactgctggaa
caaccggttgttgctgacctgcgtgcagccctcgagattacgaactcagtagatgcatct
cctgccctgttgagactccttgttcgtgaagatatcggagcgtccgacctgcgtttgctg
gggcagtgggcaagccgtctgaaccgtaagagcagaggaactccgtatgagggcgtgctt
ctgtcagccgttgattctcctccggaagtgggatggacgtctacgaatcgtcaagcggga
tcgtcacaatccgattccgttgcagagagtgccaacgatgctcctcaagaatcggatgcg
cagacggaggcgcttgatggtccatcgttctctgaaggtggatatcgtcgcgttcttcgc
ctcggagagcgcctgcgaaaactacgctcgttgcgtgggcatgggctggttgaactcgca
gaacgagcaagccagatcatggggatcctcgatgatgcgatcgccgacccgctgggttca
ggtgctagggaatcgctcgatgcctttatcgaccagattgcagaatacgaatcaagcgtt
gataaccccactcttgctggtcttgtcgaatggctgaacgttgcagaaagcgatccggca
gggctcaaaggcgttgacgttcaaccggacccgtccgcagtgcagatcctgacagtgcac
ggatccaaaggcctggaatgggatagcgtcattgtctttggaatgtccgatacaattttc
ccctcgcaccgtagcaagagcgtgtattggcgggacgagcctccagcccaaaccggctgg
gtcatggctcctgaagaactcccgcatccgttgcgaggtgactatggcgacctcccacct
ttcaccattgatgtttctaacggacgcaccccatccgcaggattctcaaagtggttaaag
accgtgtatgggccggaacttggtgcacacgtagaaagggaagaacgtcgtctggcatac
gtggcaatgacacgagcacgccacacgcaactcctcatcggctcgtggctggatgagagc
aaaaccctacgaaacccttcccgctacctcatggcatcacggcatgcgatgatcgaagac
ttcgaacagaccttggcgacagggcaagtcgtgtgggcaaacggaaacgtggatgtcaaa
gacggcaacgagttgcaggaacttcaaaaacgaatcgacggcttaaacgacgtcattccc
gaagctccaacatcggagtcgtttgcgcaagacagtgaggaagacaccatctacttcccc
ttcgaaattggtccatcacgtcaagcggtcgccaaaggagcccagcgcgtgcgacaagct
caagcagagctgaaaacggacgccgacgtcttcgaactgctcgacgccttgggtgaatct
cagcgcgttaaagacgtgacagcgctcattgaggaacatcgacttgcatcaagcaaagaa
accatggtgatccaccaggatcatattccggcaacctcggtttcaaagatgctcgaagac
atcgacgcgtttgctctggatatgcgcagacccatgcccgctcaacccagcgacagcgca
acgcttggaacgattttccacgcgtgggttgaacgacaactgcatcttgccagcgcagaa
gaacgcgatgagcccgttgctgggatcgagacccttgatgatcacgaacgcgcccgattg
cgacacatgcaggacaacttcgtcgagcttcccatcgtcaaaacgggcacaccgatcgct
atcgaagaagcattcagcgtcaaggtcgctgatatttcagtcaatggcaggatcgacgct
gtcttcgaagacaaacacggtaaaacaatcatcgtcgactggaagacggggcgggctcca
cacaggaacacgaagaaggaaacactgcgttactacgcgactcagctccgcctctaccgg
ctggcctggtcgcaactcaccgggctcgcggaagaatcaatcactccgatgcttgccttc
gtggatgccaacacaactgtttcccttgatgatctggtgaaactaggtggtgcaggcctc
gaagaaagcctagaagacgaagtgaaaaggaccttgaagcgggcctag
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integrated database retrieval system
