Spiroplasma turonicum: STURON_00389
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Entry
STURON_00389 CDS
T04034
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stur
Spiroplasma turonicum
Pathway
stur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STURON_00389 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stur03400
]
STURON_00389 (recD)
Enzymes [BR:
stur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
STURON_00389 (recD)
DNA repair and recombination proteins [BR:
stur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STURON_00389 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
SH3_13
AAA_11
HHH_4
UvrD-helicase
SLFN-g3_helicase
AAA_12
DEAD
AAA_22
ResIII
AAA_29
NACHT
AAA
PhoH
AAA_28
T2SSE
NTPase_1
RsgA_GTPase
cobW
AAA_14
IstB_IS21
AAA_16
ABC_tran
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AKU79635
UniProt:
A0A0K1P5V2
LinkDB
All DBs
Position
443724..445949
Genome browser
AA seq
741 aa
AA seq
DB search
MKKFKGKIYKYIYTTDSGWGVVLFNLLDNPKKVLKLVGNVSNLNKDYIYEIEVEQFEDKL
RNEINFKLINFKNIKDFKEQDITSLIKYLSSPLFPTIGKRLAENIVKYFKDDVLNKIINN
KEELMNISGMTIEKSLILYKNVFELKNNILDFFIENNLSLDIYNKLLRKLNGDTKLFENF
LKSDFYSFANKNKIYNFEEIDKISLAFGEQKNSDRRISWVVYNLVNKILFASSNTYTDID
QIKKELYKTTYIDINYPFQSIINNLLYAKENNILYFKDKKIYTKESYEDELYISKKMFEI
KNLVPEIKYSDNEITKKINLVELYFREIKKDDTFKFNEEQLHSLKSFVNNNVLIITGGPG
TGKTTIITAIIKLYELLYNKKNDDYAILAPTGRAASRIKEDFSDLTTSTIHKFLKYTGED
NFEINIQNQVSKSLLIIDESSILGNHLFSNLLKGISCLNKLVLIGDIKQLPSVDYGNLYE
DLINSKLFTTEYLITNNRQSSDNDIPKLANSLWDGNELELNDLKNVIFDYSESQNLLIDK
IKFYYEKFNTNNLMESITKVQIISPMYKEEFGINNLNNIIQNHLIKSSKFSLKKGNISFK
QNDKIIFTENNAKLSLFNGDVGIIESIYKDKEEYKMRLKFLDRDIIIGKEVLKNIDLSYA
CSIHKTQGSEYENVIIILDQTNKYTNFFVDKRMLYTAITRAKKNLVILSTKETFMKCSSF
LKESRKTTLVDNLLNIFKNKE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttcaaaggcaagatatataaatatatttatactactgattcaggttgaggt
gttgtattatttaatcttttagataatccaaaaaaagttttaaaacttgttggaaatgta
tctaatttaaataaagattatatttatgaaatcgaagttgaacaatttgaagataaacta
agaaatgaaattaattttaagttaataaattttaaaaatataaaagattttaaagaacaa
gatattacaagtctaattaaatatttatcttctcccttgtttccaacaattggtaaaaga
cttgcagaaaatattgttaaatattttaaggatgatgttttgaacaaaattattaataac
aaagaagaattgatgaatataagtgggatgacaattgaaaaatcattaatattatataaa
aatgtatttgaattaaaaaataatatactcgacttttttattgaaaataatttaagttta
gatatttacaataagttactaagaaaacttaatggtgacacaaaattatttgagaacttt
ttaaaaagtgatttttatagttttgcaaataaaaataagatatataattttgaggaaata
gataaaatttcattagcatttggtgaacaaaaaaatagtgatagaagaataagttgagta
gtttataatctagttaataaaattttatttgcaagtagcaacacttatacggacatagac
caaataaaaaaagaattatataagactacttacattgatattaactatccatttcaaagt
atcatcaataatttattatatgcaaaagaaaataatattttatatttcaaagataaaaaa
atatatacaaaagaaagttatgaagatgaattgtatatctctaaaaaaatgtttgaaatt
aaaaacttagttccagaaataaaatatagtgataatgaaataactaaaaaaattaatctt
gttgaattatattttagagaaataaaaaaagatgatacttttaagtttaatgaagaacaa
ctacattctttaaaaagttttgttaataataatgttttaataataactggtggtcctgga
acaggaaaaacaactattattacagcaataattaagttatatgaattattatataataaa
aaaaatgatgattatgcaatcttagcaccaacaggtagagctgcttcaagaatcaaagaa
gactttagcgatcttacaacttctacaattcataagtttttaaaatatacaggcgaagac
aattttgaaattaatattcaaaaccaagtttcaaagagtttattaataatagatgaatct
tctattcttggaaatcatcttttttctaatttattgaaaggtatttcatgtttaaataaa
ttagttttaattggtgatattaaacaactacctagtgttgattatggaaacttatatgaa
gacttaattaactcaaaattatttactacagagtatcttattacaaacaatagacaatca
agtgataatgatattcctaagttagcaaattcattatgagatggaaatgaattagaatta
aatgatttaaaaaatgttatatttgattactctgaatctcaaaatttactaatagataaa
ataaaattttattatgaaaagtttaatactaataacctaatggaatctataactaaagta
caaattatttcaccaatgtataaagaagagtttggaattaataatttaaataacataata
caaaatcatttaattaaatcaagtaaattttctcttaaaaaaggtaatataagttttaaa
caaaatgacaaaattatattcactgaaaataatgctaaattatcattgtttaatggtgat
gttggaattatagaaagtatttataaagataaagaagagtataaaatgcgtttaaagttt
ttagatagagatatcataattggtaaagaagttttaaaaaatatagatttaagttatgct
tgctccattcataaaacgcaaggtagtgaatatgaaaatgtaataataattttagatcaa
acaaataaatatactaatttttttgttgataaaaggatgctttatacagcaataactcga
gcaaagaagaacctagttatattatctacaaaagaaacatttatgaaatgttcaagcttt
ttaaaagagtcaagaaaaactactcttgtagataatttattaaatatttttaaaaataag
gaataa
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