Streptococcus thermophilus MN-ZLW-002: Y1U_C1448 Help Entry Y1U_C1448         CDS       T02116                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism stw  Streptococcus thermophilus MN-ZLW-002 Pathway stw03030   DNA replication stw03410   Base excision repair stw03420   Nucleotide excision repair stw03430   Mismatch repair Brite KEGG Orthology (KO) [BR:stw00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Y1U_C1448    03410 Base excision repair     Y1U_C1448    03420 Nucleotide excision repair     Y1U_C1448    03430 Mismatch repair     Y1U_C1448  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:stw03032]     Y1U_C1448    03400 DNA repair and recombination proteins [BR:stw03400]     Y1U_C1448 Enzymes [BR:stw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Y1U_C1448 DNA replication proteins [BR:stw03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Y1U_C1448 DNA repair and recombination proteins [BR:stw03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Y1U_C1448    NER (nucleotide excision repair)     GGR (global genome repair) factors      Y1U_C1448    MMR (mismatch excision repair)     DNA ligase      Y1U_C1448   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Y1U_C1448 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT E1-E2_ATPase BRCT_2 Motif Other DBs NCBI-ProteinID:  AFJ83897 LinkDB All DBs Position complement(1412809..1414755) Genome browser AA seq 648 aa AA seqDB search MKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVGGLVL DGFEKYQHEYPLYSLQDAFSREELDAFDKRVKSEFPNADYMAELKIDGLSISLTYVDGIL QVGATRGDGSVGENITENVKRISDIPLKLDQPLNITVRGECYLPRAEFERINTQRQENGE AEFANPRNAAAGTLRQLDTKVVAERRLATFFYQEAGPTERLTQNDVLNEVAELGFSVNPR RIVTSSMDEIWDFIQAVGQDRDHLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIAYKFP AEEKEAKLLSVDWQVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYITEKDIRIGDTVI VYKAGDIIPAVLRVVESKRTTQEAMPVPSQCPSCGSGLLHFEDEVALRCINPSCPAQIKE GLIHFASRDAMNISGMGPSVVEKLFKAELVKEVADIYGLNSQDFLQLEGFKEKSAEKLYA AIQASKENSAEKLLYGLGIRHVGAKVSKQLLESFGTIKELASADVQAIAAVDGLGEVIAK SIQRYFAKEEAQVLLKELESYGVNLSYLGQKVADDAILSGKTVVLTGKLEHLKRSEAKAK LEALGAKVTGSVSKKTDLVVAGSDAGSKLEKAQSLGIEVKDEAWLLDL NT seq 1947 nt NT seq  +upstreamnt  +downstreamnt atgaaagagctggttgacaaacttaaccagtatgcaaaagagtattataccgaggataat ccatcggtgtcagatgccgagtatgataagctctatcgtgagttagtaactttagaggct gaacacccagaacttgttcaggcggatagccctacgcaccgtgtgggtggcctggttctt gatggttttgagaaataccaacatgagtatccgctttatagtttgcaggatgctttttca cgagaagagctagatgcctttgataagagggtcaagtccgaatttcctaacgctgactat atggccgagctcaaaattgatggcctttcaatttctctaacctatgtggatggtattctt caagtaggtgcaacgcgaggtgatggttctgttggtgaaaatatcactgaaaatgttaag cgaatctcagatattcctctgaagttggatcaaccgcttaatatcaccgttcggggtgag tgttatttgccacgagctgagtttgaacgcatcaatacccagcgccaggagaatggtgag gccgaatttgccaatccacgtaatgctgcagcaggaactcttcgtcaattagatacgaaa gtagttgctgagcgtcgtttggccaccttcttttatcaagaagctggtcccactgagcgc ctgacacaaaatgatgtcttgaatgaagtggcagaacttggcttctccgttaatccacgc cgtattgtgacatcatcgatggatgagatttgggactttattcaagctgttgggcaagat cgtgatcacttggcttatgatattgatggagttgttatcaaggtcaatagtttggccatg caggaagaacttggctttaccgttaaggcaccacgttgggccattgcctataaattccca gctgaggaaaaggaagcaaaacttctctcggttgattggcaggtgggtcgtacaggtgta gtaacgccgacggctaatttgaccccagtacaattggccgggacaacagttagccgagct accctacacaatgtagattatattacggagaaagacattcgtattggtgataccgttatt gtttataaggctggtgatattatccctgctgttcttcgtgtggtagaaagtaagcgtaca acacaagaagcgatgccagttccgagtcaatgtccatcttgtggtagtggtctcttacat tttgaagatgaagtagccctacgttgtatcaatccatcttgtcctgctcagattaaggaa ggtcttattcattttgcttctcgtgatgccatgaacatctcaggtatgggaccttcagtg gttgaaaaactctttaaagctgaattggttaaagaggtggctgatatctatggtttaaat agtcaggatttcctccaattagaaggtttcaaggaaaaatcagctgaaaaactatatgca gctattcaagcatcaaaagaaaattctgcagagaaactgctctatggtttgggaattcgc catgttggtgccaaagttagtaagcaattgctagaatcttttggaactatcaaggagttg gcaagtgcagatgtccaagctattgctgctgtagatggtttgggagaggttatcgccaag tcaatccagcgttattttgccaaggaggaggctcaagttcttctgaaagaactggaatcc tatggtgttaatttatcctatcttggtcaaaaagtagcagatgatgccattctatctggt aagactgttgttttgacagggaaattggagcatcttaaacgtagtgaagcgaaggcaaaa ctagaggccctgggtgctaaggtgacgggttcagtctctaagaaaacagatttagtggtt gctggtagtgatgccggaagtaagttggaaaaagcacaaagcctaggaattgaagtaaaa gatgaggcttggttgctggatttatag

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