Salmonella enterica subsp. enterica serovar Typhi CT18: STY2836
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Entry
STY2836 CDS
T00064
Symbol
srmB
Name
(RefSeq) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sty
Salmonella enterica subsp. enterica serovar Typhi CT18
Brite
KEGG Orthology (KO) [BR:
sty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sty03009
]
STY2836 (srmB)
Enzymes [BR:
sty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STY2836 (srmB)
Ribosome biogenesis [BR:
sty03009
]
Prokaryotic type
rRNA helicases
STY2836 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
DUF561
Motif
Other DBs
NCBI-GeneID:
1249145
NCBI-ProteinID:
NP_457119
UniProt:
A0A715HAN0
Q8Z4J8
LinkDB
All DBs
Position
2698505..2699839
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK
HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKKRY
RDTKNIGKRRKPSGTKMQEQSSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggatgccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggaaaaacggcggcatatctgctg
ccggcgttgcagcacctgctcgactttccgcgtaaaaaatcggggccgccgcgcattctg
atcctgacgccaacccgcgaactggcaatgcaggttgccgatcacgctcgtgaactggct
aagcatactcatctggatatcgccacgattaccggcggcgtggcctatatgaaccatgct
gaagtgtttagcgaaaaccaggatatcgtggtcgccacgacgggccgtctgctgcaatat
ataaaagaagagaattttgactgccgggcggttgaaacactgatccttgacgaagctgac
cggatgctcgacatgggcttcgctcaggacattgaacatatcgctggtgagacccgctgg
cgtaaacagacgatgctgttctccgccacgctggaaggcgatgcgattaaagattttgcc
gagcgcctgctggaagacccggttgaggtttccgccaatccgtcaacccgcgagcgcaag
aaaattcaccagtggtactaccgtgccgacaatttcgaacataaagttgcgctgttgaag
cacctgctaaaacaagacgatgcaacccgttctatcgtgtttgtacgtaaacgtgaacgc
gtccatgaactggctgaaacgctgcgtctggcagggatcaacaattgctatcttgaaggc
gagatggcgcagatcaaacgtaacgagggtattaagcgtctcaccgacggtcgcgttaac
gtgctggtcgcgaccgacgtcgcggcacgcgggattgatattcctgacgtcagccacgtc
attaacttcgacatgccgcgcagtggcgatacctatctgcatcgcattggtcgtacaggc
cgtgcgggtcgcaaaggcactgcaatctcgctggttgaagcccacgaccatctgttgctg
ctgaaaatcggtcgctacatcgaagagccgctaaaagcgcgcgtcattgatgagcttcgc
ccgaccacgcgtgcgcccagcgaaaagctgaccggcaaaccgtcgaaaaaagtgctggcg
aaacgcgccgagaagaaaaaagagaaagaaaaagagaagccgcgcgtgaagaaacgttac
cgcgatacaaaaaatatcggtaagcgccgcaagccaagcggtacgaaaatgcaggagcaa
tccagcgaagagtga
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