Subtercola endophyticus: LQ955_16130
Help
Entry
LQ955_16130 CDS
T08409
Name
(GenBank) IS1595 family transposase
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS1595
Zn_Tnp_IS1595
Ribosomal_L37ae
zf-RRN7
Motif
Other DBs
NCBI-ProteinID:
UFS58510
LinkDB
All DBs
Position
3469980..3470933
Genome browser
AA seq
317 aa
AA seq
DB search
MAEHSGPLPGVDYPGTFPEFQEWFSTERGCFDFLAGLRWPGGFVCPKCDATKFWRTGDGL
WMCRVCQRRTSVTAGTLFDRTRTPLQTWFAAAWFITAQKNGVSALGLQRVLGLKSYETAW
AWMHKFRRAMVIPGRDVLTGTVEVDETFVGGISRGNAGRSSSKLGVMVAAEMLGPRKLGR
IRLEPTLKEPLALVTFATRTVEPGSRIKTDGARELRRLSGLGYQHDYYTQLGGTKPAHVD
LPGVHIVASLLKRWLQGTLQYGASSDHLAYYLDEFTFRFNRRSAKNRGLLFYRLMSQAVN
TEPHPLPSLVSDQPLWE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacattcgggcccgttgcctggtgtggactatccaggaacatttcctgaattc
caggagtggttctcgaccgagcggggttgttttgatttcctcgctggtttgcggtggccg
ggtgggttcgtgtgcccgaagtgcgatgcgactaagttttggcgcacgggcgacgggttg
tggatgtgtcgggtctgtcagcggcgcacgtcggtgacggcgggcacgctctttgatcgc
actcgtacgccgttgcagacctggttcgctgcggcgtggttcatcacggcgcagaagaac
ggggtctcggctctcgggttgcagcgggtgttggggttgaagtcgtatgagacggcgtgg
gcgtggatgcataagttccggcgtgcgatggtgatcccgggccgtgatgtactcacgggc
acggtcgaggtcgatgagaccttcgtcggcggcatcagccgcggcaacgcgggccgttcc
tcgtccaagctcggtgtgatggttgccgcggaaatgctcggccccagaaaactcggccga
atccggttggagccgacactgaaagaaccgctcgcgctcgtcacgttcgccacgcgtacc
gtcgagccggggtcgaggatcaaaacggacggcgcgagagagttacgccggctgtcgggg
ctgggctatcagcatgattactacacgcagctcggtggtacgaaacctgcgcatgttgac
ctgcccggggtgcatatcgttgcgtcgttgttgaagcgttggttgcagggaacactgcaa
tatggggcatcctctgatcacctcgcgtactacctggacgagttcacattccgcttcaac
cggcgttccgcgaaaaacaggggcctgctgttctaccggctgatgagccaggcggtgaac
accgaaccccacccgctgcccagcctcgttagcgatcaacccctctgggagtga
DBGET
integrated database retrieval system
