Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_0420
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Entry
SYO3AOP1_0420 CDS
T00715
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
Pathway
sul00470
D-Amino acid metabolism
sul00550
Peptidoglycan biosynthesis
sul01100
Metabolic pathways
sul01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sul00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SYO3AOP1_0420
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SYO3AOP1_0420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SYO3AOP1_0420
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sul01011
]
SYO3AOP1_0420
Enzymes [BR:
sul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SYO3AOP1_0420
Peptidoglycan biosynthesis and degradation proteins [BR:
sul01011
]
Precursor biosynthesis
Amino acid ligase
SYO3AOP1_0420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
GARS_A
ATP-grasp_4
ATP-grasp
RimK
ATPgrasp_ST
TTL
VasL
Synapsin_C
Motif
Other DBs
NCBI-ProteinID:
ACD66063
LinkDB
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Position
435592..436491
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AA seq
299 aa
AA seq
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MTKIALLYGGYSREREISIKSGKAVEKALNQLGYDYKVFDIIERDKFIKEILEYKPDLAF
IVLHGKGGEDGTIQAILEFLGIPYTGSDMKTSVIAMDKVLTKMYLKNFDIPTPDWIFFTE
EKEALNYRPDFPAVVKAPTEGSSIGVYIVNNQQEYENAVKEVFNLDDKVLIEKFIKGREL
TVSILDDEVFDIVEVVVSEGFYDFNNKYITGKTQYICPAQLDEDVYKNVQGLGHKVYKLL
NCKGPARVDIILENDKNPYVLEVNTIPGMTEFSLLPKAASARGITFNQLVEKIIKNSLK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaaatcgcacttttatacggtggatattcaagagaaagagagatttctatcaaa
agtggaaaagcggtagaaaaagctttaaaccaacttggatatgattataaggtatttgac
ataatagaaagagataaatttataaaagagattttagaatataagccagatttagcattt
atagttttacacggaaaaggtggagaagatggcacaattcaagctatcttagagtttctt
ggcattccttacacagggtcagatatgaaaacaagcgtcatagcaatggataaagtacta
acaaagatgtatttgaaaaactttgacattccaacgccagattggatatttttcacagaa
gaaaaagaggctttaaattatagaccagatttcccagcagtcgtaaaagctccaacagaa
gggtcttctattggtgtttatatagtaaataatcaacaagagtatgaaaatgctgtaaaa
gaagtatttaatcttgatgataaagtattgatagaaaagtttatcaaaggaagagagcta
acagttagcattcttgatgatgaagtttttgatattgttgaagttgttgtatcagaaggc
ttctatgattttaataacaaatacattacaggaaaaactcagtatatatgcccggctcaa
ttagatgaagatgtgtataaaaacgttcaaggtttaggacataaagtttataaacttttg
aattgcaaaggacctgcaagagttgatatcattttagaaaacgataagaatccatatgtg
ttggaagtaaatacaatccccggaatgacagagtttagtcttcttcccaaggctgcatcg
gcaagaggaataacgtttaaccaacttgtagaaaaaataataaaaaatagtttaaaatga
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