Sulfolobus sp. E5-1-F: GFS03_11540
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Entry
GFS03_11540 CDS
T06918
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
sule
Sulfolobus sp. E5-1-F
Brite
KEGG Orthology (KO) [BR:
sule00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sule02048
]
GFS03_11540 (cas4)
Enzymes [BR:
sule01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
GFS03_11540 (cas4)
Prokaryotic defense system [BR:
sule02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
GFS03_11540 (cas4)
Subtype I-B factors
GFS03_11540 (cas4)
Subtype I-C factors
GFS03_11540 (cas4)
Subtype I-D factors
GFS03_11540 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
GFS03_11540 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
RE_TdeIII
PDDEXK_3
Dna2
Motif
Other DBs
NCBI-ProteinID:
QGA55159
UniProt:
A0A5Q0SNK6
LinkDB
All DBs
Position
complement(2185881..2186489)
Genome browser
AA seq
202 aa
AA seq
DB search
MITEFLLKKKLEEQLGHIKEENAIYVTDLVKCPRKVKYESEYKELAISQVYTPSAILGDI
LHLGLENLLKENFTAETEVETQREIQVQGKVYKIKGKADAIIKNDNGESIIIEIKTSRSD
KGLPLIHHKMQLQIYLWLFSAKKGILIYITPDRIAEYEINEPLDEATIIRLTEDTITLRN
SPRFNWECKYCIFSVICPAKLT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgataactgagtttctactaaaaaagaaattagaagaacagttgggccatataaaggaa
gagaatgcaatatatgtaacagatttggtaaaatgccccagaaaagtaaaatatgaaagt
gaatataaagagctcgcaatctctcaagtttatacaccttcagctattttgggagatata
ctacatcttggtcttgaaaatttattaaaagaaaactttactgcagaaactgaagtggaa
actcagagagagattcaagttcaaggtaaagtttacaaaattaaaggaaaagcagatgcg
ataattaaaaacgataatggagaaagtataataattgagataaaaacttctaggagtgat
aaaggattacctttaatccatcacaagatgcaactacagatatatttatggttgtttagt
gcaaaaaaagggatactaatttatataacccctgataggattgcggaatacgaaataaat
gaacctttagatgaagcaacaataataagacttacagaagatacaataacgttaaggaac
tcacctagatttaattgggagtgcaaatattgtatattttccgtaatttgtccagccaaa
ctaacctaa
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