Sulfurospirillum diekertiae SL2-1: Sdiek1_1862
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Entry
Sdiek1_1862 CDS
T04910
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03420
Nucleotide excision repair
suls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sdiek1_1862
03430 Mismatch repair
Sdiek1_1862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_1862
Enzymes [BR:
suls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sdiek1_1862
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sdiek1_1862
MMR (mismatch excision repair)
Other MMR factors
Sdiek1_1862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
ARU49021
UniProt:
A0A1Y0HLQ3
LinkDB
All DBs
Position
complement(1782934..1784964)
Genome browser
AA seq
676 aa
AA seq
DB search
MPLSRLNAEQRSAATAPSGYNLIIASAGTGKTSTIVARIAHLLNHGTQPSKILLLTFTNK
AAAEMLERVGVFFDKSITSQIESGTFHAVSYRLLKKLGRNIVLKQPKDLKILLKSIHDRR
RFDHIDSSVKAYSAAYLYDLFSLYQNSTVTQSFTEWLESNDSEHGLFFDIYEDIFEEFQA
LKREFGYVDFNDLLILMRDTLKTTDTLSFDEVLIDEYQDTNTLQGSLIDAFHSKSLFCVG
DYDQSIYAFNGANIDIIGSFATRYPNANVFTLNKNYRSSHKILSLANRVIEKNPRLYEKR
LEVTRDGTFEAPKLLIYDELFSQYQAISTLIKHSMHAPADIAVIFRNNSTADGIEATLRE
QGIACKRKGGISFFDSAEVKAMLDLVGVVVNPKDMMAFIHSFEYARGVGSSLSKELFDGL
FKLGNGNIYQGFFNPRDDVEDIFKKRAKNHQLGLFDDIIDLGSVSRFYNFGFEELFLSNP
ILKHPKLTTDGAKFLHQFYKFMKHATRIKTPQSLINHVLSSEVFSAIAEVLAIKRTIKKD
GTIDEKLKAEARARIFRKGHLLKDLASGYASSERFLNALTLGSNEMSEGEGVNLLSIHAS
KGLEFKEVYVIDLMDGRFPNRKLMQKGGSLEEERRLFYVATTRAKDMLILSYAKYDKIKK
ISYTHSPFLVEAGMVH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttagtcgacttaatgctgaacaaagaagtgctgcaacagcaccctcaggatat
aatcttattattgccagtgcaggaacaggtaaaacttcgaccattgtcgcaagaattgct
catcttctcaatcatggaacgcagccctcaaaaattttactgctaacttttacgaataaa
gctgctgctgaaatgcttgagcgtgtgggcgttttctttgataaatcgattacctctcaa
attgaatcaggcacgtttcatgcggtgagttaccgtcttttaaaaaaattgggacgtaat
atcgttttaaaacagcccaaagatctcaaaattttactcaaaagtattcatgatagacgc
cgctttgaccatattgactcaagtgtaaaggcgtacagtgcagcgtatttgtatgatctt
ttttcactttatcaaaacagtacggtaacacaaagttttacggagtggcttgagtcaaat
gatagcgagcatggtctttttttcgatatttatgaagatatatttgaagagtttcaagcg
ctcaagcgtgaatttgggtacgttgattttaacgatcttttgattttgatgcgagatacg
ctcaaaacgaccgatacgcttagttttgatgaagtgctcattgatgagtaccaagacacc
aatacgttgcagggttctttgattgatgcttttcactcaaaatctcttttttgtgtggga
gattatgaccagagcatttacgcgtttaatggcgcgaatattgacatcatcggctctttt
gccacgcgctatcccaatgccaatgtgtttacgctcaataaaaattaccgatcatcccat
aaaattctctcattagcgaatcgtgtcattgaaaaaaatccaaggttgtatgaaaaaagg
cttgaagtaacgcgtgatggtacatttgaagcaccaaaacttttaatttatgatgaactc
ttttcacagtatcaggcaatctcaacgctcattaagcattctatgcatgcgcctgctgac
attgccgttatctttcgcaataactcgacagccgatggtattgaagccactctacgtgag
caaggcatcgcctgtaagcgaaaaggaggcatcagcttttttgattcagccgaagtcaaa
gcgatgctcgatcttgttggcgtggtagttaatcctaaagatatgatggcgtttatacat
agttttgaatatgctagaggggtaggaagttcgctttcaaaagagctttttgatggactt
tttaaactgggcaatggcaatatctatcaagggtttttcaacccaagagacgatgtggaa
gacatttttaaaaaaagagctaaaaaccatcaattagggctttttgatgacatcattgat
ctaggcagtgtcagtcgtttttacaattttggctttgaagagctttttctctccaatcct
attttaaaacacccaaagttgaccaccgatggtgcgaagtttttacatcagttttacaag
tttatgaaacatgcaacacgtattaaaacaccgcaaagccttatcaaccacgtcttaagc
tcggaagtgtttagtgccattgctgaagttttagctatcaagcgcacgattaaaaaagat
ggcactattgatgaaaaactcaaagcagaagcacgtgcacgtatctttcgtaaaggacat
ctactcaaagatttggcgagtggttatgcttcgagtgagcgttttttaaatgcgctgacg
cttggaagtaacgagatgagtgaaggtgagggtgtcaatttactcagtattcatgctagc
aaagggttggagtttaaagaagtctatgtcattgatctcatggatggacgtttccccaac
cgtaaattgatgcaaaaaggtggaagcttggaagaggaacgtcgtctcttttacgtagca
accacacgcgcgaaagatatgctcattctctcgtatgccaaatatgacaagatcaaaaag
atcagctacacgcattcaccctttttagttgaagcgggaatggtacattaa
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