Sceloporus undulatus (fence lizard): 121915024
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Entry
121915024 CDS
T07740
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04136
Autophagy - other
sund04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121915024 (ATG2A)
04136 Autophagy - other
121915024 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121915024 (ATG2A)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121915024 (ATG2A)
Membrane trafficking [BR:
sund04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121915024 (ATG2A)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121915024 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2-VPS13_C
Chorein_N
ATG2_CAD
Motif
Other DBs
NCBI-GeneID:
121915024
NCBI-ProteinID:
XP_042294776
LinkDB
All DBs
Position
9:26643459..26667831
Genome browser
AA seq
1971 aa
AA seq
DB search
MQTSSFSCCWLDSSLPPKKHTLLLLSLQSVNEFLESVGAPLEIVDGFIDSIAVTIPWSAL
VTENCTVEVSGLQITCRPKYRSAAPDSQSQSWASCMTTSMQLAQECLKDQTEEPSDAPQP
LEGLEMFAQTIETVLRRIEVTFLDTVIRIEHVPTGAQSSIALEVHIKRLDYCDEAVKESG
QTLSVDIHQPPPFVHKILQLSGVLFYYEEFAEAGARTPSPVPKEASESPSSKGEEAAPIP
LLQIGSCSGYTEMRIRLKQNEAFPGPKLELDGKMGSLHLLLTPRQISYLLDLLCSLNLSE
SSLLQEQLSKNRPLDSEDLKLIEQDLSQQLHSGFRTAATCLEGTGPYVGLENGEMFFSMA
PMTSSVTSIRSVSELSDIDLESSTHSDVSTSHLQAPPFTPGFILSSPRRYGHSPFAATLP
CLSRMPSKASHHPPPPSLESQHPEVLLRLTVGGLTLTLLQQAPEPMPLDRPHHHLLAQRF
FSQLEGLKDSAFGGRDFHLLRPCFEGACPHSNVRLTGAAVQISCEHKASGQLHMLSWDAS
FRLLEVLECLWPRDGGQAKPEYTELLVFAIPSAFPYNQSPQPCARIRSKHSEKVPSSKSR
LAKAAAKQTMELEAELAEFCSDVDLAALDRLCSLLHCAIVPTSPAWPPPEAHLADSPLAA
RWQASLHLTSPKATLRLQFPIPDLRPWPERRPGTEKAIRKESLLLDLAGADFRTELGPAG
ATRLELSFSDLHGVYEDGEKFSVPCFRVGKAPDLSAKTTGKKYILPKITLNLCPRASNIQ
WDPTLPKPEEMELSSAESPCELKQPEPSPFSSKRTMYETEEMVIPGDPEEMAKFQTQTLE
ASQYALEVTFPTMHIFLPSKEFYENIYNRINNDLLMWVPFSPPPSPSESLGSTSSTVSPF
ASEGPASIRWQENFQMCKSAFKLDSDSEEEDSHFYSVDEAQRKKGDQRSPFPQSCVSVLL
SVGKGRITALCDAKGEGGKKLEGCHGELVLDLENGCLFSVSQYKGRDDLGYFCIEAEKVA
LYHKAVVEDYLMADHLEIPNFLPPEGLHPTIYTSQEGPITWPLGSKKEGPLKMLSLAIQI
NLDLEKNIKEFLVTLRLEGATMRHYMALAHQSWYSQMIDFLDVLDDPILGFVPPTVITVL
HTHLFSCAVDYRPLYLPIRVLITAETFTLSSNIILDTSVFLLRFILDDSALYLSNKCDSE
TGDLRKDYVCVVDVDLLELVITTWKGATTGKLTRPLFELRCSNNVVHIHTCADSCAALAN
LIQYVVNNGDLHPPPRHDSPTEIAGQKVQLSESPASLPTCPPAETAAINQRDLTDALIDT
ERSLQELASETGDYGLRRQPSPVSVYLFPGENGAAGKAKTPASPPAPVGEGLDFSPSEDS
EGESEATDDFCILDAPGTGIPPRDGEPVVTKLLEGPIRIQEGHFSRPLGSTDLLKAPSRF
PVPESRVMMREISVVWHLYGGRDFGASRLGSGHVHSPRTKPSLSSVRSSPSRSSVTNRPQ
NTWRAQGGASRIHDLLMEIQLTKVSFQHETYPSGAPEKPSLEVEEQPMARQVFIVQELEI
RDRLASSQINKFLYLYSSECMPRRAHSNMLTIKALHVCPEAGLGGPECCLRVSLMPLRLN
IDQDALFFLKDFFTSVAASINPVVPIETGSEGRAESPGKEPAGTEGEMMASMETTASENS
SLSNASSSSSEQPIYFREFRFTSEVPIWLDYHGKHVTVDQVGTFAGILIGLAQLNCSELK
LKRLCCRHGLLGVEKVVSYALTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGLRDLFWLP
IEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTAPPLNR
TLLDKKQTRKLKRGQQPADLREGVAKAYDTVREGVIDTAQAICDVAARGHEQKGITGAVG
GVLRQIPPTVVKPLIVASEATSNLLGGMRNQIKPDARKEESLKWRSEETQE
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagttctttttcctgctgctggcttgactcctccctcccccccaaaaaacac
accttgctgcttttgtctctgcagtccgtcaatgaattcctggagtccgttggagctccg
ctggaaatcgtggatggctttatcgatagcatcgctgtcaccatcccctggtctgcctta
gtcaccgagaactgcaccgtggaagtgagtggcctgcagatcacgtgccgcccaaagtac
cgaagcgccgctcccgactcacagtcacagagctgggcatcatgcatgaccaccagcatg
cagctggcacaagaatgcctgaaggatcagaccgaagagccctccgacgcccctcaaccg
ctggaggggctggagatgtttgcccaaaccatcgaaaccgttctgcggaggatcgaagtg
acctttctggacacggtgatacgcattgagcatgtgcccactggggctcagagcagcata
gccttagaggtgcacatcaaaaggttggactactgtgatgaagcggtgaaagagtctggg
caaaccctatctgtggacatccaccaacctccgccatttgtccacaagatcttacaactg
agtggagtcctattttactatgaggagtttgcagaagcaggtgcccgcacaccgtctccg
gtcccaaaggaggcatctgagtcccccagctccaaaggcgaggaggctgctcctattcct
ttgcttcagattggcagctgctccggatacacggagatgaggatccggctgaagcagaat
gaggcctttcccggacctaagctggagttagatggcaagatgggatcgctgcatctcttg
ctgacccctcggcagatctcctatttgctggaccttctgtgttccctcaacctctcagag
tctagcctccttcaggagcagctgagcaagaaccggcccctcgattcggaggacctgaag
ttgattgagcaggacctcagccagcagctgcattcgggcttcaggacagccgccacgtgc
ctggagggaacagggccctatgttggactggaaaatggagagatgttcttctccatggca
cccatgacaagcagcgtgacgtccatccgctcggtcagcgaactgtctgacatcgacctc
gaatcctccacccacagcgacgtcagcaccagccaccttcaggcgccgcccttcacgcca
gggttcatcctgagcagtcccaggcgttacggacactctccctttgctgcaaccctgcca
tgcctcagcaggatgccaagtaaagccagtcaccacccgccgcccccctctttggaaagc
cagcatcccgaggtgctcctgcggttgaccgtcggagggctgactctgacactgctgcaa
caggccccagagcccatgccccttgaccgtccccaccaccatctcctggctcagcggttc
ttctcccagcttgagggcttgaaggactctgccttcgggggccgggatttccatctcttg
cgtccatgctttgaaggggcttgcccccacagtaatgtcaggctcacaggggccgctgtg
cagatcagctgtgagcacaaggcctctgggcagctacacatgctcagctgggacgcatca
ttcagactcttggaggttttggagtgcctgtggccgcgtgacggtgggcaagcaaagcca
gagtacaccgagttgctggtctttgccatccctagtgccttcccctacaaccagtcgcct
caaccctgtgctcgcattcgctccaaacactcagagaaggtgccatcttccaagagccgt
cttgccaaggctgcagccaagcaaaccatggagctggaagctgaattggcagagttctgc
tccgacgtggacttggcagcgctggaccggctctgttccctgctccactgtgccattgtt
cccacctcgcccgcctggcctcctcccgaggcacacttggcagattctcccctggctgcc
aggtggcaggccagcctccacttgacctcaccaaaagccactctaaggctccagttcccc
atcccggacctacgcccctggcctgagaggcggcctgggaccgagaaggcgatacgcaag
gagagtctgctcttggacctggctggtgcagatttccgcacagagcttggtcccgcaggt
gccacccggctagagctttccttcagtgacctacatggcgtgtatgaagacggtgagaag
ttctctgtgccctgcttccgggttggcaaagcccccgacctatcggccaaaacaacgggg
aagaaatatatcctcccaaagatcactctgaacctctgtccccgggccagcaacatccag
tgggacccgaccttgccgaagcctgaggagatggagctctcatctgcagaaagcccctgt
gagctgaagcaaccagagccttcgcccttctcctccaagcggaccatgtatgaaacagaa
gagatggtgatccccggagatcctgaggagatggccaagttccagacccagacgttggag
gcttcccagtatgctctggaagtgacgttccccaccatgcacatcttcctccccagcaaa
gagttttatgagaacatctacaacaggatcaacaatgacctcttgatgtgggtgcccttc
agcccacctcccagcccctctgagtctttggggagcaccagttcaactgtcagccccttt
gccagtgaagggcccgcatccatccgctggcaggaaaacttccagatgtgcaagtctgcc
tttaagttagattcggactctgaggaagaagattctcacttctattcggtggatgaggcg
cagcgaaaaaagggggaccagagaagcccctttcctcagagctgtgtctctgttctgcta
agcgtgggaaagggacgaatcacagctctgtgtgatgccaagggcgaggggggcaagaag
ctggaaggctgtcatggggagctggtcttggacctggagaatggctgcctcttcagcgtc
tcacagtacaaggggcgcgatgacctcggctacttctgcatcgaagcagagaaagttgca
ctttatcacaaagctgtcgtggaggactacctcatggctgatcacctggaaatacccaac
tttttgcctccagaggggctgcaccccaccatctatacctcccaggagggccccatcacc
tggcccttggggagtaagaaggaagggcccctaaaaatgctctccctggccatccagatc
aacctggacttggaaaagaacatcaaggagttcctggtgactctgcggctggaaggtgcc
accatgcgccattatatggcattggcccatcagagctggtactcacagatgattgacttt
ctggacgtcctggatgacccaatcctgggctttgtgccacccacagtcatcacagtcctg
cacacccacctcttcagctgtgctgtggattacaggcctctctacttacccatccgtgtc
ctcatcacagccgagacctttactctctcaagcaacatcattctggacacatcagtcttc
ctcctccggtttattctggatgattcagccctttacctctcaaacaaatgtgactccgag
actggagacttgaggaaagattatgtttgtgttgtggatgtagacctcctggagttagtg
atcaccacttggaagggagccaccactgggaagctgactcgtccgctctttgaactgcgc
tgctccaacaatgtggttcacattcacacctgtgcggactcttgtgcagctctcgccaac
ctcatccaatacgtggtcaacaacggagacttgcatccgccaccccggcacgacagcccc
actgagatagcagggcagaaggtgcagttgtctgagagtccagcatctctgcctacatgt
ccccctgccgagacggcggccattaaccagcgcgacctgacggatgccctgattgacacg
gagcgcagcctgcaggagctggccagtgagaccggtgattatgggctcaggcggcagccg
tctcctgtctcagtgtacctcttccccggagagaatggcgctgcaggcaaagcaaagacc
ccggcctcaccgccagcccctgtgggagaggggctggacttcagcccttcagaggacagt
gagggggagagcgaggccacagatgatttctgcatcttggatgctccaggcacaggaatc
ccgccccgggatggggagccagtggtgacaaagcttctagaagggcccatccgcatccaa
gaggggcacttctcccggccgctggggagcacggatttgctgaaggctccttcgcgcttc
ccggtgccagagagccgggtgatgatgcgggagatctcggtggtgtggcacctctatgga
ggcagggatttcggggccagccgattgggatcagggcatgtccattcgcccaggacgaag
ccatccctttccagtgtccgatcctccccttcccggtcctccgtcaccaaccggccccag
aacacttggcgggcccaaggaggtgccagccgcattcatgaccttctgatggagatccag
ttgacaaaggtgagctttcagcatgaaacatatcccagcggcgcacctgagaaaccatcc
ctggaggtggaggaacagcccatggcccggcaggtgttcatcgtccaagagctggagatt
cgggaccgcttggcttcctcacagatcaacaagttcctctacctgtacagcagcgagtgc
atgccccggcgtgcccactccaacatgcttaccatcaaagccctgcatgtctgtcccgag
gccggcttgggaggccctgagtgctgccttcgtgtttcgctcatgccactgaggctcaac
attgaccaggatgccttgttcttcctcaaagacttcttcaccagtgtggctgccagtatt
aacccagtagtgcccatcgagactggctcagaaggtcgtgcagagtcccctgggaaggag
cctgcgggaaccgagggggagatgatggcttcaatggagaccacagccagcgaaaacagc
tccttgtccaacgcctcctcttcctcctctgagcagcccatttacttccgagagttccgg
ttcacctctgaagtgcccatctggctggactaccacggcaagcatgtgaccgtggaccaa
gtgggtacatttgctggcattctgattggcctggctcagctcaactgctccgagctcaaa
ctcaaaagactctgctgtcggcatgggcttctgggtgtggagaaggtggtgagttacgcc
ttgaccgagtggctgacggatatccgcaagaaccagctcccgggcatcttagggggtgtg
ggtcccatgcattcggtggtacagctcttccatggcctcagagacctcttctggctgcca
atcgaacagtaccgcaaagatgggcgcatcatccggggactgcagcggggggccgcctcc
ttcggcacctcgactgcctctgccgctctcgagctcagcaaccgcctggtgcaagccatc
caggccacggcggagacagtctatgacatcctgtccccgacggctccccctctgaaccgc
acacttctggacaagaagcaaacccgtaagctgaagcgtggccagcaaccggctgacctg
cgcgagggggtggccaaggcctacgacaccgtgcgagagggcgtgatcgacaccgctcag
gccatctgcgatgtggctgcccgtggccatgagcaaaagggcatcactggagcagtgggg
ggcgtcttacgccagatcccccctactgtggtcaagcccctcattgtggcttcggaagcc
acctccaacctcctgggaggcatgcggaaccagatcaagcccgacgcccgcaaggaagag
tcgctgaaatggcggtcggaagagactcaggaatga
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integrated database retrieval system
