Sceloporus undulatus (fence lizard): 121916526
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Entry
121916526 CDS
T07740
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04142
Lysosome
sund04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121916526 (CLTCL1)
04142 Lysosome
121916526 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121916526 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sund04147
]
121916526 (CLTCL1)
Membrane trafficking [BR:
sund04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121916526 (CLTCL1)
Exosome [BR:
sund04147
]
Exosomal proteins
Proteins found in most exosomes
121916526 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
121916526
NCBI-ProteinID:
XP_042297665
LinkDB
All DBs
Position
10:11972977..12034911
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTV
ALVTETAVYHWSMEGDSLPQKMFDRHASLAGCQIINYRTDENQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPAAG
NQPFVKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHMYDLESGVCIYMNRIS
ADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAG
AEELFARKFNTLFAQGNYAEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPDQGLQFAQMLVQD
EEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWVSV
LEENNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYME
VVQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQ
QVGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKYKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFF
SKVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRL
EKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLE
EDKKECFAASLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFNKVDK
LDASESLRKEEEQVTEPTPIVFGQQLMLTAGPTAVPPQANFSYGYPAPGFTHPPVYGFNM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactccccataaggttccaggagcactttcagctccaaaatctcggaatt
aatccagcgaatattggattcagtaccttaacgatggagtctgacaagttcatatgtatc
agagaaaaagtgggcgagcaagcacaagttgtgattatagacatgagtgacccaacaact
cctatccggcgcccaatctctgcagaaagtgccatcatgaaccctgcctctaaagtaatt
gctctgaaagatgcggggaaaacactccagatttttaacattgagatgaaaagtaaaatg
aaagcacacacaatggctgaggaggtcatcttttggaaatggatatctgtaaatacagtt
gccttagtgacagagacagccgtttatcactggagtatggaaggagactctctgccacaa
aagatgtttgacagacacgccagtcttgcaggttgccaaatcatcaactacagaacagat
gaaaatcaaaagtggttgcttctcataggaatctctgcccagcaaaaccgtgtggttggt
gctatgcagttatattcagtggatcgaaaagtttcacaacctatagaaggacacgcagca
gcctttgcagaattcaagatagaaggaaatgccaagccatccactctcttctgttttgct
gtacgcagccctgcaggaggcaagctgcatatcattgaagtgggtcagcctgcagctgga
aaccagccctttgtcaagaaagcagttgatgtgttttttcctcctgaggctcaaaccgat
ttcccagtagcaatgcagattggaacaaagcatggtgttatctatctgatcacaaaatat
ggatacattcacatgtatgacttggagtctggagtctgcatctacatgaaccgtattagt
gcagacaccatctttgtgactgcacctcatgaacctacgtctggtataattggagtaaat
aaaaaagggcaggtactttctgtttgtgtggaagaagataacattgtaaactatgccaca
aatgttctccagaatcctgacttaggtctccgtatggctatccgaagtaacttagctgga
gcagaagaactctttgcccgaaaatttaatactctttttgcacagggaaactatgcagaa
gcagccaaagtggcagcatctgcaccaaagggaattctgcggacaagtgataccattaga
aagttccagagtgtgcccgcgcaacctggtcaggcctctcccttgctacagtactttggt
atcctccttgatcaaggtcagctcaacaaatttgagtcgctggagctctgccgtcctgtc
cttcaacaaggccgcaaacagttgctagaaaaatggctgaaagaagataagctggaatgc
tctgaggagctgggagatttagtaaagactgctgacccaacccttgccctcagtgtttat
ctccgtgcgaatgtaccaaacaaagtaattcagtgttttgcagaaactggtcagttccag
aaaattgttctttatgccaaaaaggttggctatacaccagactggattttcctattgaga
agtgtgatgagggtcagcccagatcagggccttcagtttgctcagatgttggtacaagat
gaagaacccctggccaacatcaatcagattgttgatgtattcatggagaatagtttgatt
cagcagtgtacctccttcttgttggatgccttgaaaaataatcgacctgctgaaggtcac
cttcagactcgtctgcttgagatgaacctcattcatgcgccacaggttgcagatgccata
ttaggaaatcagatgttcacgcactatgatcgtgcccatattgcacagctttgtgaaaaa
gcaggcttattacagagagcgctggaacattatactgatctttatgatatcaagcgtgct
gttgttcatacccatcttttgaatccagagtggcttgtgaatttctttggttctctgtca
gttgaagattctgtggagtgccttcgagctatgctgtctgccaacatccgacaaaatctg
cagctctgtgtgcaagtagcttctaagtatcatgaacagttgggcacgcagtctcttgtg
gagctttttgaatcctttaaaagttatgaagggctcttttatttcttgggctctattgtg
aacttcagtcaggatccagatgtccacttcaaatatatccaggcagcttgcaagacaggc
caaatcaaagaagtggaaaggatctgccgtgaaagcaactgctacaatccagaacgagtg
aaaaacttcctgaaggaagccaagcttactgaccagcttcccctcatcattgtttgtgac
agatttgactttgttcatgacctggttctctacctgtaccgtaacaacctccagaaatac
attgagatctatgttcaaaaggtaaacccaagccgtattccagcagtggtcggagggctt
cttgatgtggattgttctgaagatgtcattaagaacttgatcatggtggtgagaggccag
ttctcaacggatgaattagttgctgaagtagaaaaaagaaataggcttaagttgcttctg
ccatggcttgagtcccgaatccatgaaggctgtgaagaaccagcaacacacaacgcactg
gctaaaatctatattgacagcaacaacaacccagaacgcttcttgcgggagaaccctttc
tatgatagccgggttgtaggcaaatactgtgaaaagagagacccgcacttggcatgtgtt
gcttatgagagggggcagtgtgatcttgagctcatcaaggtctgcaatgagaactccttg
tttaagagtgaagcacgttacctagtacgcagaaaagatccagaactgtgggtcagtgtt
ctggaagaaaacaatccattccgaagaccactcattgatcaggttgtccagacagcatta
tcggaaacacaggatccagaggaggtttctgtgacggtcaaagcctttatgactgctgac
ctgcccaatgaacttattgagttgcttgaaaagattgttctggataattctgtcttcagt
gagcataggaatctccagaatctactaattttgactgccattaaagcagaccgtacacgt
gtgatggagtacatcaaccgtctggataactatgatgccccagatattgcaaatattgct
ataagcaacgaactttatgaagaagcttttgccatctttaggaaatttgatgtgaatact
tctgcgattcaggtattgatagaacatattggcaacttggaccgtgcttatgaatttgca
gagcgatgtaatgaaccagcggtttggagtcagctggcaagggcacagctccaaaaggac
ttggttaaggaagccatagactcttacataaaagctgatgatccttctgcctacatggaa
gttgttcaggcagccaacagaaatgataactgggaggatctggttaaattcttgcaaatg
gctaggaaaaaggcaagagaatcttacgttgagactgaacttatttttgccttggccaaa
acgaataggctgtcagagttagaagaatttgtcagtggccctaacaatgctcacatacaa
caggttggagatcgctgctatgaggaaggcatgtatgatgcagcaaagctgctgtacaac
aacgtttctaattttgcccgcctggcatctacactagttcatcttggagaataccaagca
gcagtcgatagtgcccgtaaggccaatagcaccaggacatggaaagaggtctgctttgcc
tgtgtggatggaaaggagttccggcttgcacaaatatgtggcttacacatagtcatccat
gctgatgagcttgaagaactgatcagctattaccaggatcgtggatactttgaagagctg
attgccctcttagaagctgctctaggcctggagcgtgctcatatgggaatgttcactgaa
cttgccatcttgtattctaaatacaaaccgcagaagatgagagagcacctggaactgttt
tggtccagagtcaatattccaaaggtgcttcgagcagcagagcaggcccatctctggggg
gagctggttttcctctatgacaaatacgaagaatacgataacgcaataattacaatgatg
aatcatcctaccgatgcgtggaaggaagggcaattcaaggacataattgccaaggtagcc
aatgtggaactatattacaaagcccttcagttctacttggattataaacctttgctgatc
aatgatctccttctggtattatctccacggttggatcacaccaggacagtcagctttttc
tccaaggttaatcaactgcctctagtgaaaccttacttacgctcagtccagaaccataat
aataaaggagtcaatgaggctctgaacaatcttttgacagaagaggaagactatcagggc
ttgcgagcatccattgatgcctacgataactttgataacattacactggctcagcgctta
gagaaacatgaattgattgagttcagacgtattgctgcttacctgtacaaaggcaataat
agatggaaacagagtgtggagctctgcaagaaagatcgtctttataaggatgcgatgcag
tatgctgcagaatccaaagatgctgaactggcagagaaactgcttcagtggtttctggaa
gaagacaagaaggagtgttttgcagcatctctatttacatgctatgacttgttgcatcct
gatgtggtccttgagctggcatggagacacaacattatggactttgcaatgccttatttc
atccaggtgatgagggaataccttaccaaagttgatggtctgtttaataaggtggataaa
cttgatgcttccgaaagcctaaggaaagaagaagaacaagtaacggaacccactccaata
gtttttggccaacagttgatgctaacggcaggccccactgcagtacctccacaagccaac
ttctcatatgggtatccagcaccaggattcacccacccgccagtttacggtttcaatatg
tag
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integrated database retrieval system
