Sceloporus undulatus (fence lizard): 121920657
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Entry
121920657 CDS
T07740
Symbol
VCAN
Name
(RefSeq) versican core protein
KO
K06793
versican core protein
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04514
Cell adhesion molecules
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121920657 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121920657 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sund00535
]
121920657 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
sund00536
]
121920657 (VCAN)
04091 Lectins [BR:
sund04091
]
121920657 (VCAN)
Proteoglycans [BR:
sund00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
121920657 (VCAN)
Glycosaminoglycan binding proteins [BR:
sund00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
121920657 (VCAN)
Lectins [BR:
sund04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
121920657 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
hEGF
Sushi
Motif
Other DBs
NCBI-GeneID:
121920657
NCBI-ProteinID:
XP_042303723
LinkDB
All DBs
Position
2:complement(285381426..285494996)
Genome browser
AA seq
2936 aa
AA seq
DB search
MASSAITNYKFQDSIGRCKEDYTGDVFHLTSPNKLTFEEAARQCEERDAVLATAGDLHAA
WREGFDQCDYGWLADGSVRYPVAVARIQCGGGLLGVRTLYRYENQTGFPFPDSRFDAYCF
KRKENISDSSLAELVIPLESGSANLVTELKTMPSKAALHPHISSVTPEVTKAKQEEKVLK
IISLSTVLPQTITDISDFSEVPEQDSVPSDLVVTTPTQDVFDFSKESSESQTEQIEVGPI
RTSVDALLRNDLNETLESETSLILTKEETHIGIQPTKKSMEAKSDVKLTTVLIPKELLKD
HQEPTDNDDNGVVMPDHRLEDPSIIPELDVVKVSKPFIEQNATARPDKAVTLSERKRLTT
SGYIKGPETPLFTVMDKTKMVHTDSTKLKVKEEHTVTPTDFESRLIPTLLPVERTSPSTS
ESPLVELTSVTSTVAGFLTKDQDEVASTTQMQEEKTEGRTDQKYDWTYEGSSPEEQPELG
IPRERTTISPALHTEDTAGIDQDVFTDASAMTPSGITSKKEPSIFLVPETSEDTLAKDIV
TINIRTGATGTPPEFTTVFGEEPTTVELVMEKLATVFNLTVVPSKLPLAPEHDVAEGSAH
DEKYASTKAVDPGLEIPGYETVTTSELSPEKDAVTEEKLQHSDVLPTKPSIKSENETSTV
KFISPFPTKVIIPSTDGGKVEAPTTQSPEGSGTTEEAIETEPILFPAFATSKPTVVSGAI
DKLLPTSAMKPLSTKTQPPLIYKEPDEDTSIDVQIIDESISPIKTTADDDFVGKTTEPEI
DTEYFTSSSVTAVEQPTGPPTEVLESQEEPPSTSDNDVGLESQPDIKVFVVAISGNDTDP
LYGVWDLFGFPHEIDEPPTDAESTSDEPCTSAPDEESAEILIVDHLYPGIFSLGDEDDDD
ESCENTTDVTTPPALQFINGKQQVTTAPKDTKAEEARSDQIESLAHSKNVTFPHTNETNM
LSEHEVFATIQPNESTEIMGEAVATQKVIAESVMTELFFSGDSEISTTDKVLQVTSLHDE
SDATEKTEFGTDFNQILSKHPNVFSLLNAEHSGDFTTMSKLNNYAVSHTAKPRLNEDSKR
FSATISAASKLSPSTTVSTGINDNTSSNEASVLPDYKSTVTVNTFSYVKKLLETTGSPSW
FHISEGSGDVQEENSKSTTMLIKTEKIPVQEIFSDDGRQISTKSNNDFSLYKATNPTSEH
NSVETITIQAILSSSKNVEVEDNREDSTNTISPPTAESEKMLLSNDLKDARDSNQIVTQE
PKTHTTTISTTDFSPFRAKEDTEKRLAIDEESGDGSTDVWKKPSTNIILGGPTEKVVSTD
SPFIDPGSGEIDVMYGTTTQISFPLKPESTDTQVKEIDIFNTGASSSEYAVVIDPTMKAL
DNESDRRAITEGQVSKNAFNNHQGLQHESDAVPQLTFSKKSIVESSEKVTFPTAMEEKMD
VFATSGLITSMEPGLITSMEPLKNINPDTAVTHSVGTIMSVAELSENDSKDNMIISASMS
TIQTNETRESAQLEKSSHLFPTVFTDKTGLVDVGSGEKPRDDRHSVVLVPYGPAEKIIHT
KFPLTEEGSGDKDYFPESPTQTTVLSQFLIERPVTQTMKSGSSTASDHQLFTDTPTILDI
NSDPMTPSTNKGTVRDIFNIVNMEAETSVELEVKDFATNVPAEYEINSVEESSESPGKMP
HTSTAITQGFLTKRTEYTTEQPGRALEVTPNIEEIKADTKSHDVTLTFKPQTFQNKTIRI
SPVVEEKNEWLEQNVHPTEGSHKAFSISTAYRPMSTVISNTQFFSEQGSGDAFFTVPSTT
VNTHSAVSANTLNNYILPPQSSAQTFAEGNINELENHTTKSNKDSDNDIKYHHTITEAFP
TASDKRIPTTSSLDIRATDTEASTWKQFISENEQNQKNAFEEEENISVLAAADRISQRET
SLVIKHEHTTSASELFTGTSTHRIAETSKVTSKATVLDVTGHDGSGEGSGWLDSLAKHSE
SPTQLPEREISFTFHTPQENYSDFVNPDIAVNGTPTMLIPSPSQREEKEPLPASDGDLLD
TFADESSTNSIKDYEELIPIAADKRNYSGESSSFMDITEDNGIITDETTIIDADNVKSNV
EDISAQTTVNSETYSIYGIYTSTVESQNATPAIILTNYKSGVSADSQGSSVTSKFIYSEP
ILSENTPTSDDVGSGELIPFTISQSSPISQELPQITTSLPTLSFLISSAVSSPTSFSAGE
KENGFETKDTESKSTVKDNSELQTLSDNQAIADESEIAPINRTSGKEQVDFAEKKHIAPS
PTLLYLPLKPEQDVTTHRSEARTVATQLVSQSVSNSEETSQETYEDMKTTTTESKETDLD
NFLLVTQTPKVPVTVYLLNGVSEHSEGITPSTSSSFDFDKHDSSVVQTFREASADVAATY
KPSLNESSVNTGFPLGPSSKWKFETKLSESTPVSSDHIAETTEKLGSSEELITAEETNVS
RESLSKEVNPTMFISSGTETSETSSEEGPSSEKLKELNQLDGNSAEGDLPWIHTTPSSVP
HESKTGGVFGTDGETDAWPISSPPSMDTVVELQFTQKESTTFPSNAAAKTPDPESIPEYN
KQTRNTEDINASELITPPFLLLDVTNGSDFLIRRGGGSVEGTAVQIPGQDPCKSNPCLHG
GTCYPRDSFYICTCMPGFSGDQCEVDVDECQSSPCRNGATCIDGVNTFTCLCLPSYVGAL
CEKDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQLFVNRLGH
DYQWIGLNDKMYESDFRWTDGSVLQYENWRPNQPDSFFSSGEDCVVIIWHENGQWNDVPC
NYHLTYTCKKGTVACGQPPIVENAKTFGKMKPRYEINSLIRYHCKDGFIQRHVPIIRCQG
NGRWDLPKITCMTPSSFQRTYSKKYYYKHSSPGKGNSFNSSKHFHRWIRTWQDSRR
NT seq
8811 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagtgccataacaaactacaaatttcaggattccataggtagatgtaaagag
gattacacaggtgatgtcttccatttaacatctcccaacaagctaacatttgaagaagct
gcacgtcagtgtgaagaacgagatgcagttctggctactgctggtgacctgcatgctgcc
tggagagaaggctttgaccaatgtgactatggctggctggctgatggaagtgtgcgttat
cctgttgctgtggcaagaatccagtgtggtggaggtttacttggagtgcgaactctgtat
cgttatgagaatcaaacaggatttcctttcccagacagcagatttgatgcctactgcttt
aaacgtaaggagaatatatctgattcttcattggctgaactggttatacctttggaaagt
ggatctgccaatttagtaactgaactaaagactatgccttcgaaagctgcacttcatccc
cacatctcttcagtcacaccagaagtgactaaagcgaaacaggaagaaaaggtactgaag
atcattagtttatccactgttctacctcaaacaattacagacatttctgatttttcagaa
gttcctgaacaagattctgtgccaagtgatctagtagtgaccacacctacacaagatgtc
tttgacttcagcaaggaaagttctgaaagtcagactgaacaaatagaggtgggaccaata
aggacttcagtagatgctctactgagaaatgacttgaatgaaactctagaatcagagact
tctcttatattaactaaagaagaaacacatattggcatccaacccacaaaaaaatcaatg
gaagcaaaaagtgatgtaaaactaacaactgttctcattccaaaagagctgctcaaggat
catcaagaacctacagacaatgatgacaatggggttgttatgcctgaccacaggctagag
gatcctagcataattccagaactagatgtagttaaagtgtcaaagccattcatagagcag
aatgctacagctagaccagataaagcagtaaccttatctgaaaggaaaaggctaacaact
tcaggatatataaaaggccctgaaacaccactgtttacagtaatggataaaactaaaatg
gtgcacactgattcaacaaagttgaaagtgaaagaagaacatacagtaacacctactgat
tttgagtcaagattaattccaactttgttaccagttgaaagaacatcaccctctacatct
gaatcgccccttgtggaactaacaagtgtcacttccactgtagcagggtttttaaccaaa
gatcaagatgaagtagcatctacaacacagatgcaagaagaaaagactgaaggaagaaca
gatcagaaatatgattggacttatgaaggaagttctcctgaggagcaaccagagttagga
attcccagagaaagaacaactatttccccagcactacacactgaagacacagcaggcata
gaccaggatgtatttacagatgcatcagcaatgacaccatctggtataacatcaaagaaa
gaacccagcattttcctggttcctgagacctcagaagatacacttgctaaagacatagtt
accataaatattcgtacaggtgccacaggaacaccaccagaatttacaacagtttttgga
gaggaacccactactgtagagctagttatggaaaaactggccactgttttcaatttgaca
gtagtgccttcaaagctacctttagcaccagaacatgatgtagctgaaggatctgcacat
gatgaaaaatatgcaagtacaaaagctgtagacccaggtctggaaataccaggttatgaa
accgtcacaacgtctgaattgtctcctgaaaaagatgctgttactgaagaaaagctgcaa
cattctgatgttcttcccacaaagccaagtataaaaagtgaaaatgaaacatccacagtc
aagtttataagccctttccctacaaaggttattattccttctactgatggggggaaagta
gaggctcccacaactcaaagcccagaaggttcaggaacaacagaggaggccatagaaaca
gagcctattttatttccagcttttgctacaagtaaaccaacagtggtaagtggggcaata
gacaaactcctaccaacttcagcaatgaaacctttaagtactaaaacacagccaccttta
atatacaaagaacctgatgaggatacaagcatagatgtacaaataattgatgaatctatt
tctcccattaaaactactgctgatgatgattttgtgggcaaaacaacagaaccagaaatt
gatacagaatattttacatcatcgagtgtcactgcagttgaacagcccacaggaccacct
acagaggttttagagtctcaagaagagcctccttctacttccgataatgacgttgggtta
gaaagccaacctgacataaaagtgtttgttgttgctatctcaggcaatgatacagatcca
ttatatggagtttgggatttatttggtttcccacatgaaatagatgaacccccaacagat
gccgaatcaacatctgatgaaccctgtacatcagcccctgatgaagagtctgcagaaatc
ttaattgtggaccatctttacccaggaatattcagtcttggagatgaagatgatgatgat
gaaagctgtgaaaatactaccgatgtcacaactcctccagctttgcagtttatcaatgga
aagcagcaagtgactactgcaccaaaagatacaaaagctgaagaagcaaggagtgatcaa
attgaaagtctagcacactccaaaaatgtgacatttccacacactaatgaaactaacatg
ctatctgagcatgaggtctttgctacaatacagcctaatgaatccactgaaataatggga
gaagctgtggctacccaaaaggtaatagcagaatctgtcatgacagaactgttctttagt
ggggattcagagatatctactacagataaagtgcttcaagtaacatctttacatgatgaa
tcagatgcaacagaaaaaacagagtttggaacagattttaatcaaatcttaagtaaacac
cctaatgttttttctttacttaatgcagaacattcaggagattttactaccatgtctaag
ttaaacaattatgcagtttctcacacagctaagccaagactaaacgaagattctaaaaga
ttttctgctacaatttctgctgcaagtaagttatctccttccaccactgtaagcacaggt
atcaatgacaatacatcatcaaatgaagcttctgttctacctgattataaatcaacagtt
acagtaaatacattttcttatgttaaaaaattattagaaactacaggaagtcccagttgg
tttcatatatcagaaggctcaggagatgttcaggaagagaattctaaatctacaactatg
ctaataaagacagaaaagattcctgttcaggaaattttctcagatgatggcagacaaatc
tctacaaaaagtaacaatgatttttctttgtataaagccactaaccctacatctgaacac
aattctgtagaaacaattactatccaggctatattaagctcttcaaaaaatgtagaagtg
gaagataacagggaagatagtacaaacacaatttctccacctactgctgagtctgagaag
atgctgctcagtaatgacttgaaggatgccagagatagtaaccaaattgtgacccaagaa
ccaaaaactcacaccacaacaatatcaacaactgatttttcacctttccgagccaaagaa
gacacagagaagagactggccatagatgaagaatctggagatggatctacagatgtttgg
aagaaacctagcacgaatataattttggggggtcccacagagaaagtggtaagtactgac
tccccatttatagatccaggttctggagaaattgatgttatgtatggaactactacacaa
atttcattcccactgaaacctgaaagcactgacacacaagtgaaggagatagacattttt
aacaccggtgcatcatcatcagaatatgcagtagttattgatcctacaatgaaagcatta
gataatgaatcagatagaagagccataacagaaggtcaagtatcaaagaatgcatttaat
aaccaccaagggttacaacatgaatcagatgcagttccccagttgacatttagtaaaaag
tcaattgtggagtcaagtgaaaaagtgacatttcccacagcaatggaagaaaaaatggat
gtatttgcaacatctggtttgataacatccatggagcctggtttgataacatccatggag
cctttgaaaaacattaatcctgacactgctgtgacccatagtgttgggactataatgtca
gtagctgaattaagtgaaaatgatagtaaggataatatgatcatttctgccagtatgtct
acaatacagacaaatgaaacaagggaatctgctcagctagaaaagtcaagtcatcttttc
ccaactgtatttacagataaaactggccttgtagatgtgggctcaggggagaaaccaaga
gatgacagacatagtgtggtactagttccttatggtcccgcagaaaaaataattcatact
aaatttccattgactgaagaaggttctggagacaaagactattttccagaatcccctaca
caaacaacagttttatcacaatttttgatagaaagacctgtaactcaaaccatgaaaagt
gggagcagcacggcatcagaccatcagttgtttacagacacacctacaatattagatata
aatagtgaccctatgactccctcaacaaataaaggtactgtaagagacatttttaatata
gtcaacatggaagcagaaacatcagttgaattagaggtgaaagactttgctacaaatgta
cctgccgaatacgaaattaattctgttgaagaaagttctgaatcaccaggaaaaatgcca
cacacttctacagcaatcacacaaggattcttaactaaaagaacagaatatactactgaa
cagccaggaagagctcttgaagttacgcccaacatagaagagataaaagctgatactaaa
tcacatgatgtaactctcacatttaaaccccaaacatttcaaaacaaaaccatcaggatt
tcaccagtagtagaagagaaaaacgaatggttggaacaaaatgttcatcctactgaaggt
agccataaggctttttccatatctacagcgtatagacccatgagcacagtgatcagtaat
actcaatttttctcagaacaaggttctggagatgctttttttactgttccgtctactaca
gtaaacacacattctgctgtaagtgcaaacacattaaataattatatccttcctcctcaa
agttcagcacaaacctttgcagagggtaacataaacgaattagagaatcacaccaccaaa
tcaaataaagattctgacaatgacattaaatatcatcataccataacagaggcatttcct
acagcaagtgacaaaagaatccctacaacatcaagcctagatatcagggccactgacact
gaagcatctacctggaagcagttcatttctgaaaatgagcaaaaccaaaagaatgccttt
gaagaggaagaaaatatatcagtactggctgctgctgatagaatatcccaaagggaaacc
tctcttgtgataaaacatgaacatacaacttctgcttcagaattattcactggaacctct
actcatagaatagctgaaacatctaaagtcacctcaaaagctacagtgttggatgtaaca
ggtcatgatggttctggagaaggctctggctggctggacagtttggcaaaacattctgaa
tcacctactcaattgccagaaagggaaatatcttttacatttcatacccctcaagaaaat
tattcagattttgtaaatccagatatagctgtgaatggaactccgacaatgttaatacca
tcacccagtcagagagaagaaaaagaaccactaccagcctcagatggtgacctcttagat
acatttgcagatgaaagttctacgaacagcataaaagactatgaagagctaattccaata
gcagctgacaaaagaaattattctggggagagctctagctttatggatattacagaagac
aatggaataataactgatgaaacaacaattatagatgctgacaatgtgaaatcaaatgtt
gaagacataagtgcccaaacaactgtgaattctgaaacatactcaatatatggtatttac
acttcaacagtagaaagccagaatgcaacacctgccattattttaactaattataaatct
ggtgtctctgccgatagccaaggaagttctgtaaccagtaagtttatatacagtgaaccc
atactatctgaaaacacgccaacctcagatgatgtgggttcaggagaactaatacctttc
acaatctctcaatcttcccccatctctcaagagctacctcaaataaccacttcacttcca
accctgtcatttctaataagttctgctgtatcatctccaaccagcttcagtgctggtgaa
aaggagaatgggtttgaaactaaagacacagaatccaaaagtacagtaaaagacaattct
gaattacaaacattatcagacaaccaagcaatagctgatgaaagtgaaattgctcctatc
aatagaacttcaggaaaagaacaagtagactttgctgagaagaaacacatagctccatcc
cccactttgttatacctacctcttaaaccagaacaagatgtgaccactcacagatctgaa
gcaagaactgttgctacacagcttgtctcccaaagtgtatcaaattcagaagaaacatct
caggagacttatgaagacatgaaaactacaactacagaatccaaagaaactgatctagat
aattttttactagtaacacaaacaccaaaggtgcctgtcactgtctatttactcaatgga
gtctctgaacactctgaaggaattacgccaagtacttcatcatcatttgattttgataag
catgattcatcagtggtacaaacttttagagaagctagtgctgatgttgcagctacttac
aaaccttcacttaatgagtcttcagttaacacagggtttccattaggcccctcatccaaa
tggaaatttgagaccaaactctctgaaagcacgcctgtttctagtgaccatatagcagaa
acaacagaaaaactaggaagttcagaagaactgattactgcagaagaaaccaatgtttcc
agagagtctctttcaaaagaagtgaatccaacaatgtttatatcatcaggcactgaaact
tcagaaactagctcagaagaaggaccttcttctgagaagttaaaggagctaaatcaacta
gatggaaatagtgctgagggagatctgccatggatacacaccacaccatcttctgtgcca
catgaaagtaaaacaggtggagtctttggtactgatggggaaacagatgcttggccaatt
tcatccccaccatctatggatacagttgtggagctccagttcactcagaaggaatcaaca
acatttccatctaatgctgcagccaaaacccctgaccctgagagtatacctgaatataac
aagcagacaagaaatacagaggatataaatgcaagtgaacttataaccccaccattttta
cttttggatgttactaatggatcagatttcctaattcgcagaggtgggggatcagtagaa
ggcacagcagttcagatcccaggtcaagatccatgcaaaagcaacccatgtctacatggg
ggcacttgctacccaagagattctttctacatctgcacttgtatgccaggtttcagtggt
gaccagtgtgaagtagatgttgatgaatgtcaatccagcccttgcagaaatggagccaca
tgcatcgatggagtcaatacgtttacctgcctttgtcttccaagttatgttggagctctt
tgtgaaaaagacacagaaacatgtgattatgggtggcacaaattccaagggcagtgctac
aaatactttgcccatcgcaggacatgggatgcagctgagagagaatgccgcctccaggga
gcccatttgacaagcatcttgtcgcatgaagagcagctctttgtgaaccgcttagggcat
gactaccagtggattggcttgaatgataagatgtatgaaagtgacttccgctggactgat
ggcagtgtactgcaatatgaaaactggaggccaaaccagccagatagtttcttttcttct
ggtgaagactgtgttgttataatttggcatgaaaatggccagtggaatgatgtaccatgc
aactatcatctcacctatacttgcaagaaaggcacagtggcctgtggccagccacccatt
gtagaaaatgcaaagacttttggaaagatgaagcctcgctacgaaattaactcactgatc
agataccactgtaaagatggtttcatccagcgccatgttccaatcatccgatgtcaaggg
aatggtcgatgggatttgcctaaaattacctgcatgactccatcctcattccaaaggact
tattctaagaaatattattataaacattcttcaccaggaaagggaaactcatttaattca
tcaaaacattttcatcgttggatcaggacatggcaagattcaaggcgctga
DBGET
integrated database retrieval system
