Sceloporus undulatus (fence lizard): 121936765 Help Entry 121936765         CDS       T07740                                  Symbol COL5A1 Name (RefSeq) collagen alpha-1(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism sund  Sceloporus undulatus (fence lizard) Pathway sund04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sund00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     121936765 (COL5A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sund00536]     121936765 (COL5A1) Glycosaminoglycan binding proteins [BR:sund00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121936765 (COL5A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  121936765 NCBI-ProteinID:  XP_042335255 LinkDB All DBs Position 7:19027294..19118601 Genome browser AA seq 1322 aa AA seqDB search MLMLPFRFSGGGDGGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGG GGIKGEPGDMGPQGPRGVQGPPGPSGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGL PGEKGHRGDPGPSGPPGAPGEDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGI GGMDGQTGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGPIGPPGDKGPLGKPGLPGMPGA DGPPGHPGKEGPPGEKGSQGPAGPQGPIGYPGPRGVKGADGVRGLKGTKGEKGEDGFPGF KGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGEPGPLGPSGEKGKLGVPGLPGYPGR IGPKGSTGFPGFPGANGEKGTRGTPGKPGPRGQRGPTGPRGERGQRGITGKPGPKGNSGG DGPPGPPGERGPPGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGV VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPAGLRGF PGDRGMPGPIGPVGLKGNEGPPGPPGPAGSPGERGPAGSAGPIGLPGRPGPQGPPGPAGE KGAPGEKGPQGPAGRDGIQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGP PGPTGPQGQIGQPGPAGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGE KGETGDVGQMGPPGPPGPRGPSGSPGADGPQGPSGGIGNPGSVGEKGEPGESGEPGLPGD SGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQ DGPPGDKGDDGESGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEGGLEGP PGKTGPVGPQGPPGKPGPDGLRGIPGPVGEQGLPGAPGPDGPPGPMGPPGLPGLKGDSGP KGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGGSGPKGEQGIPGPSGPIGPPGPPGLPGP PGTKGAKGSLGPTGPKGEMGHPGPPGPPGPPGEVIQPLPIHSSKRTRRNIDASQLVDDAA NTDNYMDYADGMEEIFGSLNSLKLEIEQMKHPLGTQHNPARTCKDLQLCHPDFPDGEYWV DPNQGCSRDSFKVYCNFTAGGETCIFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYV DSEGNPIGVVQMTFLRLLSASAHQNVTYNCFQSVAWHDATAGNYDKAIRFLGSNDEEMSY DNNPFIRAVLDGCAAKKGYQKTILEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACF MG NT seq 3969 nt NT seq  +upstreamnt  +downstreamnt atgcttatgcttccgttccggttcagcggtggaggtgacggtggctccaaaggccccatg gtgtcagctcaggagtcccaagctcaagccatcctacaacaggccaggctggcactgaga ggaccagctggcccaatgggacttactgggaggccaggacccatgggccctccgggtggc ggaggaatcaaaggcgaaccaggagacatggggcctcagggtccacgaggtgttcagggc cctccaggtccatcgggaaagccaggacgtcggggacgtgccggcagcgatggtgccaga gggatgccaggccagacaggaccaaagggtgaccgtggatttgatggcttggctggatta cctggggagaaaggccacaggggtgacccaggcccttctggtcctccaggagctccaggt gaagatggggagaggggagacgatggagaagtcggaccaagaggtctccctggcgaacct ggcccccgtggtttgctgggaccaaaaggacctccgggaccccctggacctccgggcatc ggaggcatggatggacaaactggccccaaggggaatgtgggtcctcaaggagaacctgga ccaccaggtcaacagggaaatccaggcgctcagggtctcccaggtcctcaaggtccgatt ggtccaccaggagacaaaggacctctagggaaacctggtcttcctggcatgcctggcgcg gatggtcccccgggtcatcctggaaaagaaggtcctcctggtgagaagggaagtcaggga cctgccggccctcagggtccaatcggatatcctggaccacgtggtgtcaagggagctgat ggtgtccgtggcttgaaaggaacaaagggcgagaagggtgaagatggcttcccaggcttc aaaggtgacatgggcattaaaggagacaggggtgaaattggccctcctggtccacggggt gaagatggcccagaaggtccaaaaggtcgcggtggtcccaatggagaacctggcccatta ggtccttctggagaaaagggaaagcttggagttcctggtttgcctggttaccctggaagg ataggtccaaagggatccactggatttccagggtttccaggagccaatggagagaaaggc acaaggggcacccccggtaaacctggaccacgagggcaacgaggcccgacgggtccccga ggagaacgagggcagcgagggatcactgggaaacctggaccaaagggtaactctggtggc gatggccctccaggtcctccaggagaaaggggtcctccaggacctcaaggccctactgga tttccaggaccaaaaggccccccgggtccaccaggaaaagacggactgccaggtcaccct gggcagagaggtgaaactggcttccaaggcaagactggtccccctggacctccaggagtt gtgggtcctcagggtcctactggagaaactgggccaatgggtgaacgtggccaccctggt cctcctgggcctccaggtgaacagggacttccagggctggccggaaaggaaggcacaaag ggtgatccaggacctgcaggtcttcctgggaaagatggtccagctggtttgagagggttc cccggagacagaggcatgcctggtccaattggacctgtgggactgaagggcaacgaaggg ccaccaggtccccctgggccagcgggttctcctggtgaaagaggtcccgctggatcagct ggtccaattggtctacctgggagacctggaccccaaggaccaccaggccctgctggtgaa aaaggagccccgggtgagaaaggccctcaaggtccagccggtcgtgatggcatccaagga ccagttggcctcccaggccccgcaggtcctgtcggcccaccaggggaagatggagacaag ggtgaaatcggtgaaccaggacagaaagggagcaaaggcgacaaaggagaacagggtcca ccaggtcctactggtccacaaggccagattggccaaccaggcccagcaggagctgatggt gagcctggtcctcgaggacaacaaggtctctttggtcagaaaggtgacgaaggaccaaga ggtttcccaggacccccaggcccagttggactgcagggtttacctggacctcctggtgag aagggagaaacgggtgatgttggccaaatgggtcctccaggtcctccggggccacgaggt ccatctgggtccccaggtgctgatgggccacaaggtccatcaggtggcattggaaatcct ggatctgttggtgagaagggtgaacctggtgaatctggagaacctgggctacctggagat tctggacctccaggccctaaaggagaaagaggagaaaaaggtgaatcaggtccttcaggg gcagctggtcctcctggccccaaaggtcctccaggtgatgatggccccaaaggtagccct ggcccagttggcttccctggtgatccaggtcctcctggcgaacccggtccagctggtcaa gatggtccaccaggtgataaaggtgatgatggcgaatctgggcagacaggctcccctggt ccaactggagagcctggtccttcaggtccaccagggaaaagaggacctcctgggccagca ggtcctgaaggccggcagggagagaaaggtgccaagggtgagggtggcttggaaggtcca cccgggaagacaggtcctgtgggccctcaggggcctccagggaaacctggtccagatgga cttcgaggaatacctggcccagttggtgaacaaggacttccaggtgcaccaggcccagat ggacctccaggtccaatgggtccacccggtttacctgggttgaaaggcgattcgggtcca aagggagaaaagggtcatccaggtttgattggtctgattgggcctcctggtgagcaagga gaaaagggagaccgaggcctgccaggtcctcaagggggatcaggacctaaaggagaacag ggtattccaggtccttccggtccaattggtcctcctggtccaccaggactaccgggtcct cccggtacaaaaggtgctaaaggatcattgggtccaacaggtccaaagggtgaaatgggc catcctggtccaccagggcctcctggtcctcccggggaagtgatccaacctcttcccatc cattcctcgaagcggacccggaggaacatcgatgccagccagttggttgatgatgctgcc aacactgacaactacatggactatgctgatggcatggaagagatctttgggtccctaaac tctttgaaactggaaattgagcagatgaaacatcccttgggcactcagcacaatccggca cgcacctgcaaagatctccaactttgtcatccagacttcccagatggtgaatactgggta gatcctaaccaaggctgttccagggattccttcaaagtttactgtaactttacagctggc ggtgaaacttgcattttcccagataagaaatcagaaggagctagaattacttcatggcca aaggaaaacccaggctcctggttcagtgaattcaagcgtggtaaactgctctcctacgtt gattcggagggcaaccccattggagtggtacagatgactttcctgaggctcctgagtgct tctgcccaccaaaatgtcacctacaactgcttccagtctgtggcatggcatgatgccact gccggcaactacgacaaggccatccgtttcctgggctccaatgacgaagagatgtcctac gacaacaatcctttcatcagggctgtccttgacggttgtgcagcaaagaagggctatcag aagaccatcttagaaatcgacactcctaaagtggagcaagtccccattgtcgacatcatg ttcaatgactttggagaagcatcccagaagtttgggttcgaggtgggaccggcttgcttc atgggctaa

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