Sceloporus undulatus (fence lizard): 121937207
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Entry
121937207 CDS
T07740
Symbol
USP40
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 40
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sund01002
]
121937207 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121937207 (USP40)
Enzymes [BR:
sund01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121937207 (USP40)
Peptidases and inhibitors [BR:
sund01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121937207 (USP40)
Ubiquitin system [BR:
sund04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121937207 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
121937207
NCBI-ProteinID:
XP_042336124
LinkDB
All DBs
Position
1:complement(166558195..166622869)
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AA seq
1237 aa
AA seq
DB search
MFGDLFDEDFSVLSHNQCGKTKLKLKDADRPFPRENTNLSGIKNQGGTCYLNSLLQTLLF
TPEFREALFSIGPEELGSLEDTHKPESKVRIIPLQLQRLFAQLLLLDQHAASTTDLTDSF
GWNSNEEMRQHDVQELNRILFSALETSLVGTSGHNLINQLYHGTVVNQIVCKECKNVSER
QEDFLDLTVAVKDVSGLEEALWNMYVEEEHFERDNLYRCGACNKLVEATKSAKLRKLPPF
LTISLLRFNFDFEKCERYKETSCYTFPVQINLKPFCEQTQLDDLEFMYELFSVIIHKGGC
YGGHYHVYIRDIDELGNWQVLEEGRLNDEEKGLKQTENDEEKENPLTILKNILLEEECKE
IPINRLAQKVLEKKSVSWNKTYRKQYGPIRKYLQNNSQAFLLSSDESKVRLNDQNHYLHF
GSPSQSHLQNEDMKMSLEEASTDLNKHSSESHWFDLNDSKVQPIREREIEKQFQGNESAY
MLFYRKSQMMRPSEARGNPRYRVPSHLLNEMDAANMKLQKKRAECDLADNNIDLHLHICS
HYKFCNGALHPLRSQKESVVDLTFDKRRTLGELRQSVFQLLEFWEGDLVLSLAKPLPAGL
HIYQTLEGEDASLCNTGLFDGAGIFVWNGKEVDGVEVQTGTDHEPVLINVLRLAGHNEGR
KGQQFMESQHVFSCSSSLRMICETLTSSKGIILKNHSGSEKEADNWKVIPEEDMEKSLRT
VGLSDGSSILVLDSHDQSMVNVAGGNLTAFTHDISWLQVKNFCKLEAEEIQVKITATIET
VMADIRIKAIEEMQLDKELVNNSCLRPISKNGKLLCPVPEDYTVKEAELKMGSLLGLCSG
KAPTSTQLFLYFIVGHDLQSSPEKEIVVEETATVKECLNLMLKKSGLAGDSWHLRKIDWC
YEPGEPLHEESATLKELNICNGEILNVAEGKLPPKGFLKVPIWWYKPFSQVKHRKNIQDQ
VNCISKKTGALGLSASGDSPTFLQSEVDLCYMGDIEISGEAFLEDLKMQVMTLPSIQDFS
VPLPEFLRVWTMENKQPCKLLRNNKEQLHKFKLGSRVEICIEPLRKEENLGPKDLLLRVL
MSIPGERDYYHPVELIWDISRECTASALRERIAAYYSLPVEKIEIAKYSPGKFEWIPISS
WTQQVSKKKKKKKSDSLQLSPYSLKDGDIIGVKNLLVDDSKDFSTIKDDIGKQMQKQVTV
EKPKQSECVQNDCFREKKMTKHHKPEAVLSISVGAFS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggatttatttgatgaagatttctcagttctgtcgcacaatcagtgtgggaag
actaagctgaaactcaaagatgctgaccgaccatttcctagagaaaacaccaatttaagt
ggaataaaaaatcagggtggaacatgctaccttaattcactacttcaaaccctgctcttc
acgccagaatttagagaagcactgttttccataggccctgaagaacttggctctctggag
gacacccataaacctgaatcaaaggttcgaataatccccttacagctgcaaagattgttt
gcccagcttttgctcttagatcagcatgctgcatccacaacagacctcactgacagcttt
ggatggaatagtaatgaggaaatgagacaacatgatgtgcaggagttaaatcggattctg
ttcagtgctttagaaacctcccttgtgggaacttctggccataatcttataaaccagctg
taccatgggacagttgttaatcagattgtctgcaaagagtgcaagaatgtcagtgagagg
caggaggatttcttagatttaacagttgctgtgaaggatgtgtctggtttagaggaagcc
ttatggaacatgtatgtggaagaagaacattttgagagagacaacctatatcgatgtgga
gcatgcaataaactggttgaagcaacaaagtccgctaaactacgcaagttgcctccattc
ctcacgatctccctcttgagatttaactttgattttgagaagtgtgaacgatacaaagag
acaagctgctataccttcccggttcagataaacctcaagcctttttgtgagcagactcag
ttggatgatctggaattcatgtatgaactcttttctgttataatacacaaaggtggctgc
tatggaggacactatcatgtttatatcagagatattgatgaattgggaaactggcaggtg
ctagaggaagggcgcttgaatgatgaagagaaaggtttgaaacagacagaaaatgacgaa
gagaaggaaaatcccttaacaattctgaaaaacatattattggaggaagagtgtaaggaa
atacctatcaatcgcttggcacagaaggttttggaaaagaaaagtgtgtcttggaacaag
acgtaccgcaagcagtatggcccaatccggaagtatttacagaacaattcccaagcattt
cttctcagttctgatgaaagcaaagttaggctgaatgaccaaaaccactacctccatttt
ggatcaccatcccaaagccacttgcaaaatgaagatatgaaaatgtcattggaagaagca
tcgacagacttaaacaaacattcctctgaatcccattggtttgatttgaatgattccaaa
gttcagccaatcagagaaagagagattgagaagcagtttcaggggaatgagagtgcctac
atgctgttctaccgaaaatcccaaatgatgagaccatctgaagctcgaggaaatcctaga
tatcgggttccaagccacctcttgaatgaaatggatgccgctaacatgaaattgcagaag
aagcgggcagaatgtgacttggcagataataatatcgatttgcatctccacatatgttct
cactataaattttgcaatggggccctgcacccattgcgttcgcaaaaggagagtgttgta
gatcttacttttgataagaggagaacactaggagaacttcggcagtctgtttttcagttg
ctggaattttgggaaggagatctggttctcagccttgcaaagcctctgccagctggactg
catatataccaaacccttgagggtgaagatgctagtttgtgtaacactggactttttgat
ggagctggtatatttgtgtggaatggaaaggaggttgatggagtggaggttcagactggc
actgaccatgaacctgttctcataaatgttcttcgtttagctggacataatgaaggacga
aaggggcagcagtttatggagtcccaacatgttttttcatgtagttcaagcctgagaatg
atttgtgaaactttaacgtcatctaaagggataatcttaaaaaatcattcagggtctgag
aaagaagctgacaactggaaagttattcctgaggaagatatggaaaagtctctcaggact
gttggacttagtgatggaagctcaattctagttttagatagccacgatcaaagcatggtg
aatgtggcaggcggcaatttgactgcttttacgcatgatatcagctggttacaagtaaaa
aatttctgtaaattggaggctgaagagatacaagttaaaattactgcaactattgaaaca
gtaatggcagatatccgaattaaagcaattgaggaaatgcagctggacaaggagctagtt
aataatagctgtctcagacccattagcaaaaacgggaaacttctctgcccagtgccggag
gattatacggttaaagaagcagagctgaaaatgggaagcttactaggcctttgctctgga
aaagctccaacatctactcagcttttcctgtattttattgttggacatgatcttcagtct
agtccagagaaagagatagtggtggaggagactgccactgtaaaagagtgtctaaattta
atgctgaagaaatctggcttagcaggagacagctggcatttgagaaagattgactggtgt
tatgaacctggggaaccattacacgaggagagtgccacactaaaagaacttaacatttgc
aatggagaaatcttgaatgttgctgaggggaagcttccaccaaagggattcttgaaagta
cctatctggtggtacaagcctttctctcaggtgaagcacagaaagaatattcaagaccaa
gtaaactgtatcagcaaaaaaacaggagctctgggactatctgcatctggagattcacca
acatttctacaaagtgaagttgacttatgttacatgggtgacatagaaatctcaggagaa
gcttttttggaagacttgaagatgcaggtgatgactttgccatccattcaagactttagt
gttccactgccagaatttctccgcgtttggacaatggaaaataaacagccttgcaaactg
ttacgaaacaacaaggagcaactccataagttcaaactaggaagcagagtggaaatttgt
atagagcctttacgcaaagaagagaatcttgggccaaaggatttgcttctacgagtgttg
atgagcataccaggagagagagattactatcacccagtggaattaatctgggacatctcc
agagagtgtacagcatctgcattgagagaaagaattgctgcatactattccttgccagtg
gagaaaattgaaatagctaaatattctcctggaaaatttgaatggataccaataagtagt
tggacacagcaagtttcaaagaaaaagaagaagaagaaaagtgatagcttacaattgagt
ccctatagcttgaaggatggagacattattggtgtgaagaatcttctagttgatgacagt
aaagacttcagtacaattaaggatgatattggaaaacaaatgcagaagcaggttactgtt
gaaaaaccaaagcaaagtgagtgtgtacagaatgactgtttccgtgaaaaaaagatgact
aagcatcataagcctgaagcagtactctccatcagtgtaggggctttcagctga
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