Superficieibacter sp. HKU1: P0H77_17390
Help
Entry
P0H77_17390 CDS
T08896
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P0H77_17390 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
supe03400
]
P0H77_17390 (recB)
Enzymes [BR:
supe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P0H77_17390 (recB)
DNA repair and recombination proteins [BR:
supe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P0H77_17390 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WES67377
LinkDB
All DBs
Position
complement(3665050..3668592)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTDTAETLDPLRLPLIGERLIEASAGTGKTFTIAALYLRLLLGLGGESAFPRPVNVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRETTDNPLYASLLAEIADKQQAADVLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLTRDIA
QVIHASWKGPRELLASIDRYLQGEAPKIKTPPGPEETLLVRHQQILERIAAIKTQWRETV
AELEGILENSGIDRRKFNRGNQGKWIDKITAWAEEETVTYQLPDALEKFTQSFLRERTKP
DGVVPEHPLFEAIETVLGGTLTLDDLVIAQAMVEIRETVAREKRRRGELGFDDMIGRLAT
ALYSESGEALATAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARGDVSAHYTLGTNWRSAPGMVGSVNRLFSLTENPFMFRDIPFKPVNA
AAKNQGLRFELNGETQPAMNLWLMPGEGVGAGDYQTTMAQLCAAQIRDWLSAGQQSRALL
WRGESSRPVRASDITVLVRSRQEAALIRDALNVLAIPSVYLSNRDSVFETPEAQELLWLL
QAVLAPERENALRSALATAMLGLNAQDIERLNLDEHAWDAVVEEFTAYRQQWQLRGVMPM
LRTLMSQRNIAENLLATPGGERRLTDILHISELLQEAGTQLESEYALVRWLAQHIAEPDT
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARYRKQEQAFYHDRTSFEAVLDL
NHSDESLELAEAERLAEDLRLLYVALTRAIWHCSLGIAPLTSRRSDKPGETDLHHSALGR
LIQKGEARDAAGLSACLHELCNEDIALRSPDAPDNSRWQAPQPPQDALAARLVRRRMADE
WRVTSYSGLQQRGHSVAQDLMPRLDIDAAGPGDIIDEPALTPHQFPRGASPGTFLHSLFE
DLDFTRPVESEWVREKLQLAGFDEQWEPVLTAWIATILAAPLTPEGISLSQLTAKEKQVE
LEFYLPINQMLDAPTLDAQMRRFDPLSAGCPPLDFRQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGESSEAYTQAAMAQAMQAHRYDLQYQLYSLALHRFLRHRLADYDYERHFGGVIY
LFLRGIDGQDPQQGIFTTRPDLHLINALDDLFAGEKEEMA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgagacccttgatccactgcgcctgccgcttatcggcgagcgcctg
attgaagcctcagcgggtaccggtaaaactttcactatcgccgctctgtacctgcgactc
ctgctggggctgggcggcgaatccgcttttccccggccagttaacgtcgaagaactgctg
gtggttaccttcaccgaagccgccaccgaagaacttcgcggacgtattcgcagcaatatt
cacgaattgcgcatcgcctgcctgcgtgaaaccaccgataacccgctttacgccagcctg
ctggcagaaattgccgataagcagcaggcggctgacgtcctgttactggcagaacggcag
atggacgaggcggcggtatttaccattcacggcttttgccagcggatgctcagcctcaac
gcttttgaatccgggatgcttttcgaacagcaactgatcgaagatgaatcgttgctgcgc
taccaggcctgtgccgatttctggcggcgccattgctacccgctgacgcgcgatattgcc
caggtgatccacgcctcatggaaaggcccgcgcgaactgctggcatccatcgatcgttac
cttcagggcgaagcgccgaaaattaaaaccccgccaggcccggaggaaacgctcctcgtt
cgccatcagcagatccttgagcggatcgcggcgattaaaacgcagtggcgcgaaacggtg
gcagagctggaaggcattctggaaaactccggcatcgacaggcgcaaattcaaccgtggc
aaccaggggaaatggatcgataagatcaccgcctgggcggaggaagagaccgttacctat
cagttgccggacgcgctggaaaaattcacccagtcgtttttgcgtgagcgtaccaaaccg
gacggcgtggtgcccgaacatccgctgtttgaggctattgaaacagtactcggcggcacg
ctaacgcttgacgatctggtgattgcccaggcgatggtggagatccgcgagacggtggcg
cgggaaaaacgccgccggggcgagctgggttttgacgacatgatcggacggctggcgaca
gcgctgtacagcgaaagcggcgaggcgctggccactgcgatccgccagcgttttccggtc
gccatgatcgacgaattccaggacaccgatccgcagcagtaccgtatttttcgccgcatc
tggcgacagcagcctgacacggccctgttgctgattggcgatccgaaacaggcgatttac
gcgttccgtggcgcggatattttcacctacatgaaagccagaggcgacgtcagcgcccac
tatacgctcggcaccaactggcggtccgcgccgggaatggtcggaagcgttaaccggctt
ttcagcctgaccgaaaatccgtttatgttccgcgatatcccgtttaagccggtgaacgcc
gccgcgaaaaatcagggcctgcgttttgaactgaacggtgaaacacagcccgcgatgaac
ctctggctgatgccgggcgaaggcgttggcgcgggggattatcagactaccatggcgcaa
ctctgtgcggcgcaaatccgcgactggctgagtgcgggccagcaatcgcgtgcgctgttg
tggcgtggcgagagctcgcgtccggtgcgcgcctcggacattaccgtgctggtgcgcagc
cgccaggaagcagcgctgatccgcgatgcgcttaacgtgctggcgatcccttcggtctat
ctctccaaccgcgacagcgtatttgaaactccggaggcgcaggagctgctgtggctgctc
caggcggtgctggcgcccgagcgggaaaatgccctgcgcagcgcgctggcgaccgctatg
ctggggctgaacgcgcaggatatcgagcggctgaatctggatgaacacgcctgggatgcg
gtcgtcgaagaatttaccgcctaccgccagcaatggcaattgcgcggcgtgatgccgatg
ctgcgcacattgatgtctcagcgcaatattgcggaaaacctgctggcaacccccggcggc
gagcggcgcctgaccgacatcctgcacatcagtgaactgttgcaggaggcggggacgcag
ctcgaaagcgaatatgccctggtgcgctggctggcacagcatattgccgagccagacacc
aatgcctccagccagcagatgcgtctggaaagcgataagcatctggtgcagatcgtgaca
atccataagtcaaaagggctggagtatccgctggtgtggctgccgtttatcgcgcgctat
cgcaagcaggaacaggctttttatcacgatcgcacctcatttgaggcggtgctcgatctt
aatcacagcgatgagagtctggagctggcggaggctgaacgtctggcggaggatctgcgc
ctgctgtatgtggcgctcacccgcgcaatctggcattgcagcctgggtattgcgccgtta
accagtcggcggagtgataaacccggtgaaaccgatcttcatcacagcgcgctgggccgt
ctgatccagaaaggtgaggccagggatgcggccgggctgagtgcctgcctgcatgagctt
tgcaatgaggatattgcgcttcgttcgcccgatgcgccggataacagccgctggcaggct
ccgcaacccccgcaggatgcgcttgccgcacgtcttgttcgccgcagaatggcggacgag
tggcgcgtgaccagctactccggcctgcaacagcgcgggcacagcgtggcgcaggatctt
atgccgcgtctggatattgacgcggcggggccgggcgacattattgacgaaccggcgctg
acgccgcaccagtttccacgcggcgcatcgccgggcacctttctgcacagcctgtttgag
gatctcgattttacccgtcccgtagagagtgaatgggtgcgggaaaaactccagctggcg
gggtttgatgagcagtgggagccggtgctgacggcgtggattgcgaccattctcgctgcg
ccgttaacgccagagggcatttcactcagccagctcacggcaaaagagaaacaggtggag
ctggagttttatctgcccatcaatcaaatgctcgacgcgccgacgctggatgcgcagatg
cggcgttttgatccgctctccgcaggctgtccaccgctggatttccgccaggtgcgcggt
atgctcaaaggatttatcgatttagtgtttcgccacaacgggcgttactacctgctggat
tacaaatccaactggcttggcgaaagcagtgaagcttatacgcaggcggcgatggcgcag
gcgatgcaggcgcatcgctacgatctgcaatatcagctttatagcctggcgctgcaccgc
ttcctgcgtcaccgcctggctgattatgattatgaacgccattttggcggcgtgatttat
ctctttttacgcggtattgatggtcaggatccgcagcagggtatttttaccacccggccc
gatctgcatcttatcaacgcgcttgatgacctgttcgccggagaaaaagaggagatggcg
taa
DBGET
integrated database retrieval system
