Superficieibacter sp. HKU1: P0H77_20155
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Entry
P0H77_20155 CDS
T08896
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
supe
Superficieibacter sp. HKU1
Pathway
supe00550
Peptidoglycan biosynthesis
supe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
supe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P0H77_20155 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
supe01002
]
P0H77_20155 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
supe01011
]
P0H77_20155 (dacB)
Enzymes [BR:
supe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
P0H77_20155 (dacB)
Peptidases and inhibitors [BR:
supe01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
P0H77_20155 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
supe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
P0H77_20155 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WES67891
LinkDB
All DBs
Position
4231932..4233365
Genome browser
AA seq
477 aa
AA seq
DB search
MRFSRFIIGLTTSIAFCVQAANVEEYVNQLPAGANLALMVQKVGASTPEIDYHGQQMALP
ASTQKVITALAALLQLGPDFRFTTTLESKGNVDNGVLKGDLIARFGADPTLKRQDLRNMV
AVLKKSGVQKIEGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
GQKAGDMAFIRVASFYPVTMFSQVRTLARGSADAQYCELDVVPGELNRFTLTGCLPQRAE
PLPLAFAIQDGASYAGAILRDELKQAGITYSGNLLRQTQVNEPGTVIASKQSAPLHDLLK
IMLKKSDNMIADTVFRMIGHSRFNVPGTWRAGSDAVRQILRQQVGVDIGNTIIADGSGLS
RHNLLAPATMIQVLQYIAQHDTELNYISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS
LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPSDQRNRRIPLVRFESRLYKDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttccagatttatcatcggattgactaccagtatagcgttctgcgtacaggcg
gcgaatgtcgaggagtatgtaaaccagctcccggcaggtgctaacctggcgcttatggta
caaaaagtcggcgcctcgacgccagagattgactaccacgggcaacagatggcgttaccg
gccagtacccagaaagtcattacggcgctggcagccctgttacagcttggaccagacttc
cgctttaccactacgcttgaaagtaagggtaacgtagataacggcgtattgaaaggtgac
ctgattgcccgtttcggtgcagatcctaccttaaaacgtcaggatctgcgcaatatggtc
gctgttctgaaaaagtcaggcgtgcagaaaattgagggcaacgtcctgatcgacacctca
attttcgccagccatgataaagcgccaggctggccgtggaacgatatgacccagtgcttt
agcgcgccacccgccgccgccatcgtcgatcggaactgcttctccgtgtcactttacagc
ggtcaaaaagcgggtgatatggcgtttattcgcgtcgcctcgttctatccggtaaccatg
ttcagtcaggtgcgcaccctggcgcgaggctccgctgacgcgcagtattgtgagctggat
gtcgtgcccggtgagttaaaccgcttcacgctgaccggctgtctgccgcagcgtgccgag
ccgttaccgctggcgttcgcgattcaggacggcgcaagttatgccggagccatcctcaga
gacgaactaaaacaggccgggatcacctatagcgggaatttgcttcgccagactcaggtc
aatgaaccgggtacggtaattgccagtaaacagtcggccccgctgcatgacctgcttaag
attatgctgaaaaaatcggacaatatgattgcggatacggtattccgcatgatcggtcat
tcgcgcttcaatgtgccaggcacgtggcgtgcaggatccgacgcggtaaggcagatcctg
cgtcagcaggtgggcgtcgatattggcaacacgatcatcgccgacggatccggactgtca
cgtcataacctgcttgcccctgccaccatgatccaggttctgcaatacatcgcccagcac
gacaccgagctgaattatatttcgatgctcccgctggcaggctatgacggatcgctccag
tatcgtgccggtctgcatcaggcaggcgtcgacggtaaggtctcggcaaaaacgggatcg
ttgcagggggtgtataacctggcaggctttattaccacggccagcggacaacgtatggca
tttgtgcaatatctttcaggttacgcggtagaaccgtcggatcagcgcaatcgtcgcatc
ccgctggtacggtttgaaagtcggttgtataaggatatttaccagaataactga
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