Candidatus Solibacter usitatus: Acid_0439
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Entry
Acid_0439 CDS
T00412
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sus03032
]
Acid_0439
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_0439
Enzymes [BR:
sus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Acid_0439
DNA replication proteins [BR:
sus03032
]
Prokaryotic type
DNA Topoisomerases
Acid_0439
DNA repair and recombination proteins [BR:
sus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Acid_0439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABJ81449
UniProt:
Q02BW7
LinkDB
All DBs
Position
546256..547317
Genome browser
AA seq
353 aa
AA seq
DB search
MFSVDPAESAQEAGLRYVSGCGACIQRIRRGKSFRYTGPDGKPLRDARHLERIRSLAIPP
AWEKVWICPSPNGHLQAFGWDARGRKQYRYHPKYREVRDQAKFSRMLAFGTVLALIRKRV
AEDLARRGLPKEKVLATVVRLLETTFIRVGNDEYARDNESFGLTTMRNRHVRIEGARLNF
HFRGKSGQDHTIELTDRRLAKIVRECQDLPGYELFEYVDESGQVGRIDSCDVNEYIREIT
GQDFTAKDFRTWAGTVIAATELNACEKCDSETAVKRNIAAAVKNVARRLGNRPATCRKYY
IHPAILDAYADGSLFARMEQGEQQNAAYGGLGLRPEEYCVMVLIADHQLAAAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgttctctgtcgatcctgccgaatccgcacaggaagcgggcctgcgctacgtatccgga
tgcggcgcttgcatccagcggatccggcgcggcaaaagtttccgctacaccggaccggac
ggaaaacccttacgcgatgccaggcatctggagcgtatccggtcgctggccattcctccc
gcctgggaaaaggtatggatctgcccgtctccgaacggccacctgcaggccttcggttgg
gacgcccgcgggcgcaagcaatatcgctatcatcccaagtaccgggaggtgcgcgatcag
gccaagttcagccgtatgctggccttcggcaccgtgctcgcgctgatccgcaagcgcgtg
gcggaagatctggctcgccgcggcctgcccaaagagaaggttctcgcaaccgtggtgcgc
ctgctggagactacttttattcgcgtgggcaacgacgagtacgcgcgcgacaatgaatcc
ttcggcctgaccacgatgcgcaaccggcacgtgcggattgagggcgcgcggctcaacttt
cacttccgcggcaagagcggccaggatcacaccatcgaactgaccgaccgccgcctggcg
aagatcgtccgggaatgccaggatttgccgggctacgaactttttgaatacgtcgatgaa
tcggggcaggtcggccgcatcgattcctgcgacgtcaacgagtacattcgagagattacg
gggcaggatttcacggccaaggacttccgtacatgggccgggacagtgattgccgccacc
gagctcaacgcctgcgaaaagtgcgacagcgaaacggcggtcaagaggaacattgccgcc
gcggtgaagaacgtcgcgcgccgcttggggaaccgcccggcgacgtgccgcaaatactac
atccatcccgcgattctggatgcatatgcggatgggtcgctattcgcgcggatggagcag
ggtgagcagcagaacgcggcttacgggggcctcggacttcgcccggaagaatactgtgtc
atggttctgatcgccgaccaccagcttgccgccgcggcgtga
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