Candidatus Solibacter usitatus: Acid_6673
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Entry
Acid_6673 CDS
T00412
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sus
Candidatus Solibacter usitatus
Brite
KEGG Orthology (KO) [BR:
sus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sus03400
]
Acid_6673
Enzymes [BR:
sus01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Acid_6673
DNA repair and recombination proteins [BR:
sus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Acid_6673
Prokaryotic type
Acid_6673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABJ87595
UniProt:
Q01RX5
LinkDB
All DBs
Position
complement(8376956..8378326)
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AA seq
456 aa
AA seq
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MDERVRLLNDRPVRQGGKYVLYWCRWNRRVEANHALLHAAETANRMDLPLVVYERLSCAY
PTACDRFHTFVLEGVPHFQAQLRKLGIPYIFQLPRRKTVRDERRDAVLRDAAVVVTDDCL
RAAPRLDVRLEAVDGSCIVPVGAIPGRSYAAYSIRPRIHRLLPKYLKAAPALEIRRRSRE
RFEDLHTEVSAPNIASLVAECEIDHGVRASTTFPGGRMAAEAGLQRFLEERLRRYARDKN
EPSLHATSELSPYLHYGHIGALEVALAVREHAAAHKLIADEFLEELIVRRELAHNFARYA
PRLDSLDVLPDWARKTIEDHRRDTRDPVYGRAEFEGAATHDDLWNATQKELVLRGKIHGY
YRMYWGKRIIEWSPSAEEAHATMLWLHDRYALDGDDPNTYTNILWCFGLHDRPWPERPIY
GTIRSMVRSGMERKTDVHAYIREIQYLESTGRELTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaacgcgtgcggctgctcaacgatcgacctgtccggcagggcgggaagtacgtg
ttgtactggtgccgctggaatcggcgggtagaggccaatcacgcgctactgcatgcggcg
gagacggcaaatcgcatggacctgccgctggtggtgtacgagcggctgtcgtgcgcatac
ccgactgcgtgcgaccggtttcacacgtttgtgctcgagggcgtaccgcattttcaggcg
cagctgcgcaaactcgggattccctacattttccaactgccgcgacggaagacggtgcgc
gatgagcggcgcgacgccgtgttgcgggatgcggcggtagtggttacggacgattgtctg
cgcgcggcgccccggctggacgtgcggctcgaggcggtggacgggagctgcatcgtgccg
gtgggcgcgattccagggcggagttacgcggcgtactcgatccggccaaggattcaccgg
ctgctgcccaagtatttgaaggctgcaccggcgctcgagatccggcggcggtcacgcgag
cggttcgaagatttgcatacggaggtctcggcgccgaatatcgcgagcctggtggcggag
tgcgagatcgatcacggcgtgcgggcttcgactacgtttccgggaggacggatggcggcc
gaagcaggcctgcaacgctttttggaggagcggctgcggcggtatgcgcgggataagaac
gaaccgtcgctacatgccacgagcgagctgagtccgtacctgcattacgggcatatcggg
gcgctggaagtggcgctggcggtgagggagcatgcggcggcgcacaagctgattgccgac
gagtttctggaggagctgattgtgaggcgcgaactggcacacaatttcgcgcgttatgcg
ccgcggctggattcgctcgacgtgctgccggattgggcgcggaagacgatcgaggatcac
cgccgcgatacgcgggatccggtgtacgggcgcgcggaattcgaaggggcggccacgcac
gacgatttgtggaacgcgacgcagaaggaactggtgctgcgcgggaagattcacgggtat
taccggatgtattgggggaagaggatcatcgaatggtcgcccagcgcggaggaggcgcat
gccacgatgctgtggctgcacgaccggtacgcgctggatggggacgacccgaatacgtac
acgaacatcctttggtgcttcggtctgcacgaccggccctggcccgagcggccgatttat
gggaccatccgcagcatggtgcggtcggggatggaacgaaagaccgatgtgcatgcgtac
attcgggagattcaatatctcgaaagcacgggaagggagctgacctcgtga
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