KEGG   Streptomyces venezuelae: SVEN_5001Help
Entry
SVEN_5001         CDS       T02274                                 

Definition
(GenBank) ATP-dependent DNA ligase clustered with Ku protein, LigD
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sve  Streptomyces venezuelae
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sve00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SVEN_5001
Enzymes [BR:sve01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SVEN_5001
DNA repair and recombination proteins [BR:sve03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SVEN_5001
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5384095..5384979)
Genome map
AA seq 294 aa AA seqDB search
MTPITEVEGRRLALSNLAKVIHPVTGTTKGEVLHYYATVGPAILPHLRDRPVSFLRYPDG
PDGQLFFTKNPPPGTPSWVRTTPVPRSEDPRARQVVIEDLPSLMWAANLVVEFHTPQWRA
SSPAVADRLVFDLDPGPPATVVECCRVALHLRERLAADGLEAYAKTSGSKGLHLLVAVVP
TPSADVSAYARRLAVEAEAALPGLVTHRMAKALRPGKVFVDHSQNAAAKTTATPYTLRAR
ARPAVSAPVTWDEVADCADPESLVLLMDDIAPRLERYGELLAPLFAPEHAGEVP
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcacagaggtggagggacggcgcctggcgctgagcaacctggcgaaggtg
atccacccggtcaccgggaccaccaagggcgaggtgctccactactacgcgaccgtcggc
cccgcgatcctgccgcatctgcgggatcgtccggtgtccttcctgcgctatccggacggt
ccggacggccagctgttcttcaccaagaatcctccgcccggcacaccctcctgggtgagg
accacccccgtgccccgctccgaggacccccgcgcccggcaggtggtgatcgaggacctg
ccttcgctgatgtgggcggccaacctggtggtggagttccacacgccccagtggcgggcc
tcctcccccgccgtcgccgaccggctcgtcttcgacctcgaccccgggccgcccgcgacg
gtcgtcgagtgctgccgggtcgcgctgcacctgcgcgagcggctcgcggcggacggtctc
gaggcctacgccaagacctccggctcgaaggggctgcacctgctggtggcggtcgtcccg
acgccgtccgccgacgtctcggcgtacgcgcgccggctcgccgtcgaggcggaggccgcg
ctgccgggtctcgtcacccatcggatggccaaggccctgcggcccgggaaggtcttcgtc
gaccacagccagaacgccgccgccaagaccaccgccaccccctacaccctgcgggcgcgg
gcccggccggccgtctcggcgccggtcacctgggacgaggtggccgactgcgccgacccc
gagtccctcgtcctcctcatggacgacatcgcgccacgtctggagcggtacggggagctc
ctggcgccccttttcgcgcccgagcacgccggggaggtcccatga

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