Sturnus vulgaris (common starling): 106855697
Help
Entry
106855697 CDS
T08833
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
svg
Sturnus vulgaris (common starling)
Brite
KEGG Orthology (KO) [BR:
svg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svg03021
]
106855697 (AFF1)
Transcription machinery [BR:
svg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
106855697 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
106855697
NCBI-ProteinID:
XP_014736051
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MAAQSSLCNEDRNLLRIREKERRSQEALEDKKQFSEKTPLFAEPYKTNKEDELSSRIQNM
LGNYEEVKEFMSNKSCQNLIGIPKSVAPLFPPGQPDRPYFPEKAIRTLPSSFQHLPRRPP
MGPMVVPPRPPSHSSHYQKAQPGTEPASGLHSKSRSLPSARSHGQEHGRAGRDTQAGFPH
SHSDKPGSGEGHAHGLQASPLALSPFLPCLLSSPVAPLSPLHSSQNINSRSQNSSKSHGS
TYSQTKSLQDLVTGSQEKESRDSPAVTLTSTTQPSSQTFPPSLTSKVSAMQQKPTAYVRP
MDGQDQAPFESLELKPLLEEYHEGPNEDVSDLKAKVKAELSKLEMPSEPKKEADDDLSDL
KAKAKAELSKFETPSEPIEQTNPIDVQSIEEILREMTRSWPPPLTALNTPTKAEPSKFPF
PAKELQPEGSVAKDQKQYGTPSEMLPGSQPRTSMLQDDLQLSDSEESGDDQVVEKSPSSL
APPRYSSLQSQPKSVASAHSSSSESGSTSDSDSSSDSETESHSSDSEANDPPRAPAPEPE
PPTPNKWQLDNWLTKVNPPAVPTESLSDIARGDGREEGKKQEQDISSNSSQQHTELREPP
HKSQVARAPQEAPLPTKRSCQKAPAHEPSPRQTVGIKGPSKPLLHQEPKRGLKVESEPGP
LEVTDQSFRDKPKVKKTVKTKSSDRKDLKPGLQEPSEKKKDKGSHQANAKPFLDPRLMGD
AQARDGLSPLPQGQGTTSIRTSSHRLQDLPKEKLPLPLREKLLSPVRDPPTREHLVVKID
LCHLEKVPEPPRKNEHQRKAETKDLPGARKQDLKRKAMDSPEESLRKKKRGEKEETDRKK
MKSEKETKSLQSSSNKDSSKLKASKTSSETQKKDVLPPLPAMSAAQPAPKSAKMTQKRPR
NETTELPAMDNPARNKSNHKDPLFAKHRKVEGNHMELSKGIKGSAGDVTKPFPVPSLPNG
TSKPGRPLLKFEKQHSKEYYIEQAQRLKHKADAMTDKTGKAFEYLEAALLFIEYGIALES
DVLEPKSAYSIFSDTIVLIKFIMTLKPFADSSVSSHGKIFAVLRMRCQSILHMAMFGYKK
DTAMRYSRLLNDHFKSNFRVIQAPSPGVARSTGLPSPLSPIPSPAGSGSSQPGSNDSNGV
GHSSIGNSTGSTVTVSCHISSVTSSYVNITSYILHAYEIWEKADALARKNKEFFAELSRA
TSALALTSSLTDLVHYIRQGLQWLRLEANMP
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccagtcgagcttgtgcaatgaggacagaaacttgctgcggattcgagagaaa
gagagacggagtcaggaggctctggaagacaaaaagcagttttctgagaagactcccctc
tttgcagaaccctacaagactaataaagaagatgagttgtcaagccgaattcagaacatg
ctgggcaattatgaggaggtcaaggagttcatgagcaacaaatcttgtcaaaaccttata
gggattccaaagagcgttgcccctctgtttccccccggacagcctgatcgcccgtacttc
cctgagaaggccatccgtacattgccatcttcattccagcacctgccccgccgtcctccc
atgggacccatggttgtacctcctcgtcctccaagccactccagtcactaccaaaaggca
cagccaggaacagaaccagcttcaggtttgcacagcaagagccgcagcttgcccagcgct
cggagccacggtcaggaacacggccgggctggccgggacactcaggcaggttttccccac
agccacagtgacaagcctggcagcggggaaggtcatgctcatggcctgcaggcctcccct
ctggcactctccccgttcctgccatgtttgttgtcttctcctgtggcacccctgtcacct
ctacattccagccagaatatcaattccaggtcgcagaacagcagcaaaagtcacgggtca
acctacagtcaaaccaaatcattacaggacttagtgacaggatcacaggagaaggaaagt
cgggacagcccagccgttaccttgaccagcaccactcagccttcctctcagacttttccc
ccttctttgacatcaaaagtcagtgcaatgcagcagaaaccaactgcctatgtcagaccc
atggatggccaagatcaggcaccatttgaatccctggagctcaaacctctcctggaggaa
taccatgaaggacccaatgaagatgtctcggatttgaaggcaaaagttaaagctgaacta
tccaagttggaaatgccttctgagcccaagaaggaggctgatgacgatctctcagatttg
aaggccaaagccaaagcagaactatccaaatttgaaaccccttctgagcccatagagcaa
accaaccccattgatgtgcagtctattgaagaaattttgagggaaatgacccggtcttgg
ccacctcccctgactgctcttaatacacctactaaagcagagccttccaaatttccattc
ccagcaaaggaattgcaacctgaaggatctgtagcaaaggatcagaagcaatatggaaca
ccttcagaaatgttgccaggttctcagccaagaacatcaatgctccaggacgacctgcag
ctcagtgatagtgaagagagtggtgacgaccaagttgttgaaaagtcaccttcttcactt
gctcctccaaggtacagttccttacagtcccagcccaagagtgtggcatcagcacattcc
agcagctcggagtcagggagcaccagtgactcagacagctcctcagactcggagacagag
agccactcgagtgacagtgaagcaaacgaccctccaagagcaccagcacctgagcccgag
ccaccaactcctaataagtggcagcttgacaactggctgaccaaggtgaacccaccagca
gtgccaacagagagcctcagtgacattgcccgtggggatggacgtgaggagggcaagaag
caggagcaggacatcagcagcaattcctcacagcagcacactgagctgagggagcctcct
cacaagagccaagtggccagggctcctcaggaggctcctcttccgaccaaacgcagctgc
cagaaggctccggcacacgagccctcgcccaggcagaccgtggggatcaaagggcccagc
aagcccctgctgcaccaggagcccaagagaggcctgaaggtggagagtgagcctgggcct
ttggaggtcactgaccagtctttcagggacaagccaaaagtcaaaaaaacagtgaagaca
aaatccagtgacagaaaagatctgaaaccaggacttcaagagccttctgagaaaaaaaag
gacaagggctcccaccaggccaatgccaaacccttcttggaccccaggctcatgggagat
gcccaagcacgcgatggtctcagtccccttcctcagggccagggcacaacctccatcagg
accagcagccacaggcttcaggatttgcccaaggagaaactgcccttgcctctcagggag
aagttgctctcaccagtgagggatcccccaacccgtgagcacctcgtggtgaaaatagat
ctctgtcacctggaaaaagtccctgagccccccaggaaaaatgagcaccaaaggaaagca
gagaccaaggaccttcctggtgcaaggaaacaggacttgaagaggaaagccatggacagt
cctgaggagtcccttagaaaaaagaagaggggagagaaggaggaaactgataggaagaaa
atgaaatcagaaaaagaaacaaaatcattgcagtcttcatctaacaaagactccagtaaa
ttgaaagcatcaaaaacttcatctgaaactcagaagaaagatgtgctcccaccactgcca
gccatgtctgctgcacagcctgcaccaaagtcagccaagatgacccaaaagagacccaga
aatgagacaactgaactgcctgccatggataaccctgccaggaacaagagtaaccacaag
gatcctttgtttgccaagcacagaaaagtagagggaaatcatatggagctgtcgaagggc
atcaaaggatctgcaggtgatgtcacaaagcctttcccagtgccttctttgccaaatggt
acctctaagccagggagacctctgctcaagtttgaaaagcaacattcaaaggaatactac
atcgaacaggcccagaggctgaagcacaaagctgatgcaatgactgacaagactggaaag
gcctttgagtacctggaggctgctcttttattcattgaatatgggattgccttggaatca
gatgtgctggaaccaaaatcagcttacagcatattcagtgacaccatagttctcatcaaa
ttcattatgactttgaaaccttttgcagactcctcagtctcttcacacggaaaaatcttt
gctgtgttacgcatgcgctgccagtccattctgcacatggcaatgtttggttacaaaaaa
gacactgctatgaggtattccagactcctgaatgaccacttcaagagtaatttcagagta
atacaagcaccttctcctggtgttgcaagaagcacaggcttgccttctcctctttctcca
ataccctctcctgctggatctgggagttctcagccaggatcaaatgatagcaacggcgtt
ggccacagcagcattggcaacagcactggctcaactgtcactgtctcctgtcatatctcc
agtgtcacctcttcctatgtcaacatcacctcctatatcctccatgcttatgaaatttgg
gaaaaggctgatgcactggccagaaagaataaagagttttttgctgaactcagcagagcg
acaagtgctctggcactgaccagtagcctgacagacctggtacactacatcagacaggga
ttacagtggctgagactggaagcaaatatgccttaa
DBGET
integrated database retrieval system
