Saccharomonospora viridis: Svir_00060
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Entry
Svir_00060 CDS
T00980
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svi03032
]
Svir_00060
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_00060
Enzymes [BR:
svi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Svir_00060
DNA replication proteins [BR:
svi03032
]
Prokaryotic type
DNA Topoisomerases
Svir_00060
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Svir_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
NCU-G1
Motif
Other DBs
NCBI-ProteinID:
ACU95100
UniProt:
C7MRN8
LinkDB
All DBs
Position
7083..9047
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AA seq
654 aa
AA seq
DB search
MAAKNSEYSASSITVLEGLEAVRKRPGMYIGSTGVRGLHHLIQEVVDNSVDEAMAGYASR
VEVTLLADGGVRVVDDGRGIPVEPHPVHGKPTVEIVLTQLHAGGKFDSDSYAVSGGLHGV
GVSVVNALSSALEVEIHRDGRIWAQRYENSVPGELVDKGPTDRSGTSVTFWADPEIFETT
EYNAETVARRLQEMAFLNKGLTMILRDERVTDEEGEDATGERAQLKERTYYYPGGLEDFV
KYINASREAIHPSVISFEQKGDGLEVEVAMQWNDGYTPSVYTFANTINTHEGGTHEEGFR
AALTRVVNAYARDKKLLKEKDANLTGDDVREGLAAIVSIKLTEPQFEGQTKTKLGNSEAR
SFVQTACNEWLADWFERNPTEAKLIINKAVSSAQARLAARKARDLVRRKGAMDIGGLPGK
LKDCRSNDPEECELYIVEGDSAGGSAKEGRDSRFQAILPIRGKIINVEKARIDKVLKNQE
VQSLITALGTGIHDDFDISKLRYHKIVIMADADVDGQHIRTLLLTLLFRFMRPLVEQGHV
YLAQPPLYKIKWPRMEPQYAYSDRERDGLLRAGAEAGRKLPKDDGIQRYKGLGEMNAEEL
WETTMDPSNRVLLQVTLDDAAQADELFSVLMGEDVEARRSFITRNAKGVQFLDV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaagaacagcgaatacagtgcgtcctccatcacggtgctcgagggcttggag
gcggtccgcaagcgccccggcatgtacatcggttcaaccggtgtacgtggcttgcaccac
ctgatccaggaggttgtggacaactccgtcgacgaggcgatggccggttatgccagccgc
gtcgaggtcacgttgttggccgacggtggtgtccgcgtcgtcgacgacggacgtggcatc
ccggtcgaaccccacccggtgcacggcaaacccacggtggagatcgtgctgacgcaactg
cacgcgggtggcaagttcgacagcgactcctacgccgtgtcgggtggtctgcacggcgtc
ggcgtctcggtggtgaacgctctttcgagcgcactcgaggtggagatccaccgtgacggc
aggatctgggcccagcgctacgagaactcggtgcccggtgaactggtggacaaggggccc
accgaccgcagtggtacgagcgtcacgttctgggccgaccccgagatcttcgagaccacg
gagtacaacgccgagaccgtggcccggcggctgcaggagatggccttcttgaacaagggg
ctgaccatgatcctgcgtgacgagcgggtgacggacgaggagggcgaggacgccaccggc
gaacgcgctcagctcaaggagcgcacctactactacccgggtggtctggaggacttcgtc
aaatacatcaacgcctccagggaggccatccacccgagcgtgatctcgttcgagcagaag
ggggacggcctcgaggtcgaggtggcgatgcagtggaacgacggctacacaccgtcggtc
tacacgttcgccaacacgatcaacacacacgagggcggtacgcacgaggagggcttccgc
gccgcgttgacccgggtggtgaacgcctatgcgcgcgacaagaagctgctcaaggagaag
gacgccaacctcaccggtgacgacgtccgcgaagggctcgcggcgatcgtctccatcaag
ctgaccgagccgcagttcgaggggcagacgaagacgaaactcggcaacagcgaggcgcgg
tcgttcgtgcagaccgcctgcaacgagtggctggccgactggttcgagcgcaaccccacc
gaggccaagctcatcatcaacaaggcggtgtcgagcgcgcaggcgcggctggccgcgcgt
aaggcacgggacctcgtgcgccgtaagggcgcgatggacatcggtggtctgcccggcaag
ttgaaggactgccgctccaacgaccccgaggagtgcgagctctacatcgtcgagggcgat
tcggcgggtggttccgccaaggagggtcgggactcgcggttccaggcgatcctgccgatc
cgaggaaagatcatcaatgtcgagaaggcgcgcatcgacaaggtgttgaagaaccaggag
gtccagtcgctcatcaccgcgctgggcaccggtatccacgacgacttcgacatctcgaag
ctgcgctaccacaagatcgtgatcatggccgacgccgacgtcgacggccagcacattcgc
acgctgctgttgacgttgttgttccgattcatgcgtccgctggtggagcagggccatgtc
tacctcgcccagccgccgctctacaagatcaagtggccgcgcatggaaccccagtacgcc
tacagcgatcgggaacgggacggtctgctgcgcgcgggtgccgaggccgggcggaaactg
ccgaaggacgacggcatccagcggtacaagggcctcggtgagatgaacgccgaggagctg
tgggaaaccacgatggacccgagcaaccgcgtgttgttgcaggtcaccctcgatgacgcc
gctcaggccgacgagctgttctccgtgctgatgggcgaggacgtcgaggcgcgccgttct
ttcatcacccgtaacgccaagggtgtgcagttcctggacgtctag
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