Saccharomonospora viridis: Svir_06010
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Entry
Svir_06010 CDS
T00980
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
Organism
svi
Saccharomonospora viridis
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
zf-HC2
Sigma70_r2
DUF11
HTH_23
Flavin_Reduct
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ACU95672
UniProt:
C7MUV9
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Position
complement(612343..614829)
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AA seq
828 aa
AA seq
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MATDSASPHGRSDADLIASVRAGRIEEYGALYERHVKAATRLARQWYPMDRVTADEVVAE
AFATVLDTLREGKGPDSAFRVYLLSTVRATAANRVRGAKPIGGATLSPTPAESERTSPTG
YETSFPPSAVPSTPSSASPASPQASPDLAFGDREHLERSLIARAFSRLPERWQAVLWHTV
IEQESPSDIAPLLGLSPNTVSALAYRAREALRQECLRAHLAETSAHRCRATASKLGVWAR
DGLSLRERAQVEQHLDHCARCRALADELADVNASLRGVVALLVLGGAAFGYLAATGGVAS
AVTTGSPAAVTGPRHFLGVAVSGVALATAIAVALTAGGVNGAPVAQQSPEPTHEQQPPTT
SPPSAPSVSPSPSTELPSPQPSLPALPVPRPEAGSYQPPKASEPIPPPPLPHPPSDGADT
EEPRRPPTTPPPSGGVGDDMLPPSPRLTASAPRDGVTLDAGGEAAGLDITVRNDGDAVAE
GITVELRLPDGVTAVDAPDDGDDEDGGDDGQDDDDAGAEDGAEDSGTPDEDGTEDGVTQL
AAETATGPADGTARSGSPARARTGSGTATADEGTAGKEVTCPAGEGTVTCVVTDPLEPDE
SALLRFRVAASSTASSGAAVGTVTAADTDPAHFTVPITVNRDAADLDVSSAGEYLLVKLR
NEGVRQADATVTLTVPARLLTTHRLECETGSDDDPLRCESRRPLAPGGTARLWLRLPHSH
DGAVTVIGTVGDATVTETVEPNPSLPDLPGPVLPGAPDAETPPPEPTRPTEDPASTPAAT
TPEDPADTITVTPTPSPTSQKHAWSPLAELRKWFSRRAGRRIRPRQAT
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
gtggccaccgactccgcgagcccacacggtcgcagtgacgccgacctgatcgcgtcggtc
cgtgcgggccggatcgaggagtacggcgccctctacgaacgtcacgtgaaggccgccacc
cggctggcccggcagtggtacccgatggaccgggtaacggccgacgaggtcgtcgcggag
gcgttcgccacggtgctcgacacccttcgcgagggcaagggcccggacagcgctttccgg
gtgtacctgttgagcacggtgcgcgcgacggccgccaaccgtgttcggggggcgaaaccg
atcggcggtgccaccctctcccccacacccgcggagtcggaacggacgtcaccgaccggg
tacgagacgtcgttccccccgtccgccgtcccctccacaccgtcctcagcgtccccggcg
tccccgcaggcctcgcccgatctcgcgttcggagatcgggaacacctggaacgcagcctc
atcgcgcgagcgttctcccggttgccggaacgttggcaggccgtgctgtggcacacggtg
atcgaacaggaatcaccgtcggacatcgcgcccctgttggggttgtcgcccaacaccgtg
tcggcactggcctatcgagcgcgcgaggcactgcggcaggaatgtctgcgagcccacctg
gccgaaacatcggcacaccgatgtcgggccacggcctccaaactcggcgtgtgggcacgt
gacggcctgtcgcttcgggaacgcgcccaggtggagcagcatctcgatcactgtgctcgc
tgtcgggcgctcgccgacgaactggcggacgtcaacgcctccctccgcggtgtggtggcc
ctcctcgtcctcggcggcgcggcgttcggttatctcgccgccaccggtggggtggcctcg
gccgtcaccacggggtctcccgctgcggtgacggggccacggcacttcctcggcgtcgcc
gtgtccggagtcgccttggccacggccatcgccgtcgcgttgaccgcgggtggggtcaac
ggcgctccggtggcacagcagtcaccagagcccacccacgagcagcaaccgccgacgaca
tcgcccccgtcggcaccctcggtgtcgccgtcgccgtccaccgagctcccttccccgcaa
ccgtcgttgcccgcactgccggtcccgcggccggaggccggttcgtaccaaccgccgaaa
gcctccgagccgatcccacccccaccgctgccgcatccaccctcggacggcgcggacacc
gaggaaccccgacgaccgcccacgacacccccgccgtccgggggagtcggagacgacatg
ctcccgccgagtccccgactcacggcgtcggctccccgggacggggtcaccttggacgcg
ggtggcgaggccgctggactcgacatcaccgtccgcaacgacggagacgccgtcgcggaa
ggcatcaccgtggaactgcggctgcccgacggggtgacggccgtcgacgcccccgacgac
ggggacgacgaggacggcggagacgacggtcaggacgatgacgacgccggcgccgaggat
ggtgccgaggactccggcacacccgacgaggacggcaccgaagacggtgtcacccaactc
gccgccgagaccgccacgggccccgccgacggaacggcccgcagcggttccccggcccga
gcgcgaaccggctccggcacagcgacggcggatgagggaacggcgggcaaggaggtgacc
tgcccggcgggcgaaggcacggtcacctgtgtcgtcacagacccacttgaaccggacgaa
tcggcactcctgcggttccgtgtcgcggcctcctccacggcctcctcgggcgcggccgtg
ggaacggtgaccgccgcggacacggacccggctcatttcacggttccgatcaccgtcaac
cgggacgccgcggacctcgacgtctcctcggcgggcgagtacctgctcgtgaaactacgc
aacgaaggggtccggcaggccgacgcgaccgtgaccctgaccgtgcccgcccggctcctc
accacccatcgtctggagtgtgagaccggatccgacgatgacccgctgcggtgtgaatcg
cgccgtcccctcgccccgggcggcaccgcgcggctgtggctccgtctcccccactcccac
gacggcgcggtgacggtcatcggcacggtcggggacgccaccgtgacggagacggtcgag
ccgaacccgtcgctgcccgacctgcccggcccggtcctgccgggtgcccccgacgccgag
accccgcctcccgaacccaccaggcccaccgaggaccccgcgtccaccccggccgcgacg
accccggaggacccggccgacacgatcaccgtgactccgacgccgagccccacatcgcag
aagcacgcgtggtcgccgctggccgaactccggaagtggttctccagacgggccgggcga
cgcattcggccacgtcaagctacgtag
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