Subdoligranulum variabile: NQ490_05645
Help
Entry
NQ490_05645 CDS
T08454
Name
(GenBank) ROK family transcriptional regulator
Organism
svj
Subdoligranulum variabile
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR_2
HTH_20
HTH_11
HTH_Crp_2
Fe_dep_repress
HTH_IclR
HTH_DeoR
GntR
HTH_5
TrmB
MarR
Rrf2
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UWP69337
LinkDB
All DBs
Position
1154290..1155591
Genome browser
AA seq
433 aa
AA seq
DB search
MILQVYITVNHQNQQKQSRNIAIYPQKFLIRLTFLLWLGKMKVFYIDFTFKKLKGLYMKK
LSLPPTERRRLTRNQIYQYIYKAPGCSKQEIADSLNFSMPTVHQNLNELTQAGLVRIDGV
GESTGGRRPLQLTINENAHFSVGISVTDDHFRIIAANLRLDEIAYQKYPHPHCNNMKEMG
NFLAADLENFLNRFGLNREKLLGVGIALPAIFNADRTCVVAAPTLNLRDQSIRPLICSIP
YPVSVCNDATSGGYAEWYVQQDSDCMAYISLEGGVGGAILMNGVPYTGLNGRSGEFGHIC
VQPEGLSCKCGLRGCLEAYCSSDRISTDLGISVEQFFAGLEAGNLAYQTLWKDYLRHLAS
ALATIRMVFDCRIVLGGYVAQYLTPFLKELRGLTASRDPFDEEAEYISLCHYPKHAVPLG
AALHFINLFVEEL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgatactgcaagtatacatcactgtcaatcatcaaaaccaacaaaagcagtcgagaaat
atcgccatatatccacaaaaatttctgattcggttgacttttttgttgtggttgggtaag
atgaaagtgttttacattgatttcacttttaaaaagttaaagggattatatatgaaaaag
ctttctcttccgcctaccgaacggcgtcgcttgacccggaaccagatttatcaatatatt
tacaaggcacccggatgttctaagcaggagattgctgacagcctcaatttcagtatgcca
actgtacatcaaaatctgaacgaactgacacaagcggggttggtgcgcatcgatggcgtt
ggagaatctacgggtgggcgccggcctcttcaattgaccattaatgaaaatgcgcatttt
tctgtaggaatttctgtcaccgacgatcattttcggatcattgctgcgaacctccggctg
gatgaaatcgcatatcaaaagtatcctcatccccattgcaacaacatgaaggagatgggg
aacttccttgcagccgatttggaaaattttctaaacagatttggtctgaaccgcgaaaaa
ctgctgggggtcgggatcgcgctaccagccatttttaatgccgacagaacttgtgtggtc
gcagcaccgacgcttaatttgagggatcaaagtattcgtccgctgatttgcagcatccct
taccctgtttccgtttgcaatgatgcgaccagcggcgggtatgctgaatggtacgttcag
caagattccgattgcatggcatatatttccttagaaggtggcgtaggtggcgctatcctt
atgaacggtgttccttataccggtctgaatggccgcagcggcgagttcgggcacatttgt
gtgcagccggaagggctttcctgtaagtgtggtttgcgtggctgtctggaagcttactgc
tcttctgatcgaatttctaccgatttgggtatctccgtggagcagttttttgccggcttg
gaagccgggaacttagcgtaccaaacgttatggaaagattatctccgccacttggcatca
gcgcttgccacgatccgtatggtttttgactgtcgcattgtgctgggcgggtatgtcgct
caatatctcacgccttttttaaaggagctccgggggctgacggccagccgcgatccgttt
gatgaggaggccgaatatatttccctttgccattaccccaagcacgcggttccgcttggg
gcagcattgcattttatcaatcttttcgttgaggagttatga
DBGET
integrated database retrieval system
