Streptomyces violaceusniger: Strvi_2036
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Entry
Strvi_2036 CDS
T01602
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svl03016
]
Strvi_2036
Enzymes [BR:
svl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Strvi_2036
Transfer RNA biogenesis [BR:
svl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Strvi_2036
Prokaryotic type
Strvi_2036
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AEM81770
UniProt:
G2NTC2
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All DBs
Position
1962572..1963510
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AA seq
312 aa
AA seq
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MTRKGRAASGAPDGLVIVDKPAGFTSHDVVAKMRRFADTRRVGHAGTLDPMATGVLVVGV
EKATRLLGHLALTEKEYRATIRLGQTTVTDDAEGEITASDGAVGVEPGAVEARIEELTGD
IQQVPSKVSAIKIDGKRSYARAREGEEFAIPARPVTVSSFVLHDRREAKAEDGTTVLDLD
VTVVCSSGTYIRALARDLGAGLGAGGHLTALRRTRVGPYGLEAARTLESLEESLEIMPIA
EAAAAAFPRWDVDDHQARLLGNGVRIDMPSGEAAPAPSASGSGPVAVFGPEGRFLALVEE
SKGKAKSLAVFV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaagggcagggccgcctccggggcaccggacggcctggtgatcgtcgacaag
ccggccggtttcacctcgcacgacgtcgtcgccaagatgcgccgcttcgccgacacccgg
cgggtcggccacgccggaacgctggacccgatggccaccggcgtgctcgtggtcggcgtg
gagaaggcgacccggctgctgggccatctggcgctgaccgagaaggagtaccgggccacc
atccggctcggccagaccacggtcaccgatgacgcggagggcgagatcaccgcatcggac
ggcgccgtcggggtcgagccgggggccgtcgaggccaggatcgaggagctgaccggggac
atccagcaggtcccctcgaaggtcagcgccatcaagatcgacggcaagcgctcctacgca
cgggcgcgggagggcgaggagttcgcgatcccggcacggccggtgaccgtctcctccttc
gtcctccacgaccgccgcgaggccaaggcggaggacggcaccaccgtcctcgacctggac
gtcaccgtggtgtgctcctccggcacctacatccgggcgctggcgcgcgacctgggcgcc
ggactcggcgccggcggccatctgacggctctgcgccggacccgggtcggtccgtacggg
ctggaggcggccaggacgctggagagcctggaggagtcgctggagatcatgcccatcgcc
gaggcggcggccgccgccttcccgcgctgggacgtggacgaccaccaggcccggctgctg
ggcaacggcgtgcggatcgacatgccctcgggggaggcggcgccggctccttcggcatcg
ggttcggggccggtcgcggtcttcgggccggaggggcgttttctggccctcgtggaggag
tcgaagggcaaggcgaagagcctggccgtcttcgtatga
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