Streptomyces violaceusniger: Strvi_5102
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Entry
Strvi_5102 CDS
T01602
Name
(GenBank) glycoside hydrolase family 2 sugar-binding protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl00052
Galactose metabolism
svl00511
Other glycan degradation
svl00600
Sphingolipid metabolism
svl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Strvi_5102
09103 Lipid metabolism
00600 Sphingolipid metabolism
Strvi_5102
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Strvi_5102
Enzymes [BR:
svl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Strvi_5102
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Invasin_D3
F5_F8_type_C
Cellulase
BetaGal_ABD2
Big_1
Mannosidase_ig
Motif
Other DBs
NCBI-ProteinID:
AEM84642
UniProt:
G2NUP3
LinkDB
All DBs
Position
5660186..5663296
Genome browser
AA seq
1036 aa
AA seq
DB search
MAVTRRSILIAGTAAPMAGALVTANPAQGALASRAMGGRTIPLTDGWRFALVNPGGITDP
TGAYETAHDPAYDDSAWREVAVPHDWSIELSPTTDHGTSGGTGFLPGGLGWYRTTFTLPR
TLEGKRICVEFDGVYMDSSVYCNGRPLGEHPYGYTGFALDLTEVAHTDGATPNVLAVKVR
NRLPSSRWYSGSGIYRHARLVVTDPVHVARWGTYLTTPGLATALRAGYATVRARTLVVNA
SDGPKPVTVVSTVKDPDGHTVVQAHSTVTIGAGDTRTATQELRIDRPRLWSFDTPERYVL
ETELRVGQDTTDRYRTPFGLRHVTLDPDRGFSLNGEYAKLQGVDLHHDLGALGAAVNTDA
VLRQVAIMKSMGVNALRTSHNPPSPELIEVCERLGIVMLVEAFDCWRTGKNTYDYGRFFD
EHCEADITEMVRAARNSPAVVMWSIGNEIPDSTSAPGLGMAQRLIDAVRAADDTRPVVIG
SDKYRGLPAEGSPADLMLAKLDGLGLNYNTAASVDALHARYPRLFLFESESSSETSTRGA
YQEPEHLNTGENHTPGRRETSSYDNNLASWTMSGEYGLKKDRDRRFFAGQFLWSGIDYIG
EPTPYDVFPVKASFFGAVDTAGFPKDMYYLFKSQWTGEPMVHLVPMDWTGHRPGETVEVW
AYSNVASVELFLDGRSLGVREFDAKKTTDGRAYLETTEPTGDDKTVTSGPYPGSYTSPGG
SAGKLHLTWKVPFARGELKAVARRGGRVVATDVLRTAGRPHTVRLTPDRESVDADGRSLC
FVTAEVVDAHGVVVPDAGHPIAFKVTGGSLAGVDNGRQESAERYQASTRTAFHGKALAIV
RSGTEAGPLTITARSAGLRTATTTVRATGGTSQPVTRPVPFAPDPGPGAPDQPRADASYS
GAPTTLPAAMLDGDPATGWSNAFHKPATALLPAFDGARKADWVSVTWSGRRRLRRVEVSF
TVDATHTLPASIEVSAWNGHAYVPVRGASVDWATASGTPTVITFDPVRTSRLRLDLTSRH
PGAADGAQRIVAFEAR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacgcgcagatcgatattgatcgcaggcaccgccgccccgatggccggggca
cttgtcacggccaatcccgcgcagggcgccctcgcgtcccgcgccatgggaggacggacg
atcccgctcacggacggctggcgcttcgccctcgtcaaccccggtgggatcaccgacccg
accggcgcgtacgagaccgcccacgacccggcgtacgacgactcggcctggcgcgaggtc
gccgtcccgcacgactggagcatcgagctctcccccaccaccgaccacggcaccagcggc
ggcaccggtttcctgcccggcggcctcggctggtaccgcaccaccttcaccctgccgcgc
accctcgagggcaagcggatctgcgtcgaattcgacggcgtctacatggactcgtccgtg
tactgcaacggacggcccctcggtgaacacccctacggatacaccggcttcgccctcgac
ctcaccgaggtggcccacaccgacggcgccactcccaacgtcctcgccgtcaaggtgcgc
aaccgccttcccagcagccgctggtactcgggcagcggcatctaccgccatgcccggctc
gtcgtcaccgacccggtccatgtggcccggtggggcacgtacctcaccacccccggcctg
gccaccgccctgcgcgccggatatgccacggtgcgggcgcggaccctcgtcgtcaatgcg
tcggacggcccgaagccggtgaccgtggtctccaccgtcaaggaccccgacgggcacacg
gtggtccaggcgcactccaccgtcacgatcggggcgggtgacacccgtaccgccacccag
gagctcagaatcgaccggccgcggttgtggtcgttcgacaccccggagcgctatgtcctg
gagaccgaactgcgggtcggccaggacaccaccgaccggtaccgcacccccttcgggctc
cgccatgtcaccctcgaccccgaccgcggattctcgctgaacggcgagtacgccaagctc
cagggcgtcgatctccaccatgacctgggcgcgctcggcgccgccgtcaacaccgacgcc
gtgctgcgccaggtggccatcatgaagagcatgggcgtcaatgccctgcgcacctcgcac
aatccgccctcaccggagctgatcgaggtctgcgagcggctcggcatcgtgatgctcgtg
gaggcgttcgactgctggcgcaccggcaagaacacctatgactacgggcgcttcttcgac
gagcactgcgaggcggacatcaccgagatggtgcgcgccgcccgcaactcccccgccgtc
gtcatgtggtccatcggcaacgagatccccgactccaccagcgccccggggctgggcatg
gcccagcggctcatcgacgccgtccgcgcggccgatgacaccagacccgtcgtgatcggc
tcggacaagtaccgcggtctgcccgccgagggctcccccgccgacctgatgctcgccaag
ctggacgggctcggcctcaactacaacacggccgcctcggtggacgccctgcacgcccgc
tacccgcggctgttcctcttcgagtccgagtcctcctcggagacctccacccgcggggcc
tatcaggagcccgagcacctcaacacgggcgagaaccacacccccggcaggcgcgagacc
tccagttacgacaacaacctcgcctcctggacgatgagcggcgagtacgggctgaagaag
gaccgggaccggaggttcttcgccgggcagttcctgtggtcgggcatcgactacatcggc
gagcccacgccgtacgacgtgttcccggtgaaggcgtcgttcttcggcgcggtggacacc
gcgggcttccccaaggacatgtactacctgttcaagagccagtggaccggcgaaccgatg
gtccatctggttcccatggactggaccggccaccggccgggcgagaccgtggaggtgtgg
gcctactccaacgtcgcctcggtggagctgttcctggacggccggtcgctgggggtccgc
gagttcgacgccaagaagaccacggacggccgcgcctacctggagaccaccgagcccacc
ggcgacgacaaaaccgtcacctcaggcccctaccccggcagctacaccagtccgggcggc
agcgccggaaagctccacctcacctggaaggtgccgttcgcacggggtgagctgaaggcc
gtggcccggcgcggcggccgggtcgtggccaccgatgtgctgcgcacggcgggacgcccg
cacaccgtacggctgacccccgaccgcgagagcgtcgacgccgacggccgctcgctgtgc
ttcgtgaccgccgaagtggtcgatgcccacggtgtggtggtgcccgacgccggccatccg
atcgccttcaaggtcaccggaggctccctggccggggtcgacaacggccgccaggagagc
gccgagcgctaccaggcgagcacccgcaccgccttccacggcaaggccctggccatcgtc
cgctccggcaccgaggccgggccgctgaccatcacggcccgctcggcggggctgcgcacc
gcgaccaccaccgtccgcgccaccggcgggacatcgcagccggtcacccgcccggtgccc
ttcgcgcccgaccccggccccggcgccccggatcagccacgcgccgacgcgagctattcg
ggcgcgccgacgaccctgcccgcggccatgctggacggcgatccggccaccggctggtcc
aacgccttccacaagcccgccacggcgctgcttcccgccttcgacggcgcccggaaggcc
gactgggtctcggtgacctggagcgggaggcggcggctgcgccgcgtggaggtgtccttc
accgtcgacgccacgcacaccctgcccgcctcgatcgaggtctccgcatggaacggccat
gcctacgtcccggtgcgcggggcgtccgtcgactgggccaccgcctccggcaccccgacg
gtcatcaccttcgacccggtccgcacctcccggctccggctggacctcaccagccgtcat
ccgggcgcggccgacggcgcccagcgcatcgtcgccttcgaggcccggtga
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