Shewanella vesiculosa: KDH10_000106
Help
Entry
KDH10_000106 CDS
T08322
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00521
Streptomycin biosynthesis
svm00523
Polyketide sugar unit biosynthesis
svm00541
O-Antigen nucleotide sugar biosynthesis
svm01100
Metabolic pathways
svm01110
Biosynthesis of secondary metabolites
svm01250
Biosynthesis of nucleotide sugars
Module
svm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KDH10_000106 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KDH10_000106 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KDH10_000106 (rfbD)
Enzymes [BR:
svm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
KDH10_000106 (rfbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UJL42936
LinkDB
All DBs
Position
118802..119680
Genome browser
AA seq
292 aa
AA seq
DB search
MRILVTGKNGQIGRCLVEQLSTMSDITLLALDRDQLDITDSINVNKVVAEFIPNIIINAA
AYTAVDKAEQEREFAYAVNRDGPYNLAVAANNINATIIHISTDYAFAGDSIAAYVETDNT
EPQSEYGRSKLAGEQAVERACSRHIILRTGWVFAEHGHNFVNTMLRLTKTRDTLDVVADQ
FGGPTYAADIANAIIIITKQLANGNQAYGLYHYSGFPYVSWHAFAEKIFELGLAQGILKQ
SIQVNPITTPDYPTPAKRPANSQLNCHKIKQEFGIVQSDWQAALVRIEEYSR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattggtcacaggtaaaaatggccaaattggtaggtgcttagttgagcaactt
agcactatgtcagatatcaccttgttggcattagatcgtgaccagcttgatattacagac
tctattaacgtcaataaggttgttgctgaattcattccgaatatcattatcaatgctgct
gcctatactgcggttgataaagccgaacaagagcgtgaatttgcttatgctgtaaatcgt
gatggaccttataaccttgctgttgcagcgaataatatcaatgccactattattcatatt
tcgaccgattatgcttttgctggcgatagtattgcagcttatgttgagacagataacacc
gaacctcaaagtgagtatggtcgtagtaaactcgctggtgaacaagccgttgaacgagcg
tgttcgcggcatattatactaaggaccgggtgggtatttgccgaacacggccataatttt
gtcaacaccatgctgcgccttactaaaaccagagacactttagatgttgtagctgatcag
tttggcggcccaacctatgcggctgatattgccaacgcgattatcattatcacgaaacag
ctggctaatggtaatcaagcttatgggctatatcattattcaggttttccttatgtaagc
tggcatgcttttgctgaaaagatattcgaactggggttagcgcaaggtatattgaagcaa
tcaattcaagttaacccaataacaactccagattacccgacacccgcaaagcgcccggca
aactcacagttaaattgtcataaaattaagcaagaatttggtatcgttcaaagtgattgg
caagcagcgttagtcagaattgaagagtattcacgatga
DBGET
integrated database retrieval system
